RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
FOXN3-206ENST00000554005 HOXB1P14653 301 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-206ENST00000554005 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
FOXN3-206ENST00000554005 MINK1Q8N4C8 1332 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-206ENST00000554005 IRF6O14896 467 aa11.21□□□□□ -0.61
FOXN3-206ENST00000554005 TRIM66O15016 1216 aa11.21□□□□□ -0.61
FOXN3-206ENST00000554005 CCDC102AQ96A19 550 aa11.21□□□□□ -0.61
FOXN3-206ENST00000554005 ADAM33Q9BZ11 813 aa11.21□□□□□ -0.61
FOXN3-206ENST00000554005 C6orf132Q5T0Z8 1188 aa11.2□□□□□ -0.62
FOXN3-206ENST00000554005 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
FOXN3-206ENST00000554005 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
FOXN3-206ENST00000554005 PDE4DQ08499 809 aa11.16□□□□□ -0.62
FOXN3-206ENST00000554005 CERKQ8TCT0 537 aa11.14□□□□□ -0.63
FOXN3-206ENST00000554005 GPBP1L1Q9HC44 474 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-206ENST00000554005 TMEM132AQ24JP5 1023 aa11.13□□□□□ -0.63
FOXN3-206ENST00000554005 BCL2L12Q9HB09 334 aa11.13□□□□□ -0.63
FOXN3-206ENST00000554005 AMHR2Q16671 573 aa11.12□□□□□ -0.63
FOXN3-206ENST00000554005 PADI6Q6TGC4 694 aa11.11□□□□□ -0.63
FOXN3-206ENST00000554005 KDM4CQ9H3R0 1056 aa11.1□□□□□ -0.63
FOXN3-206ENST00000554005 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
FOXN3-206ENST00000554005 COL9A1P20849 921 aa11.09□□□□□ -0.63
FOXN3-206ENST00000554005 TTC13Q8NBP0 860 aa11.09□□□□□ -0.63
FOXN3-206ENST00000554005 PRSS12P56730 875 aa11.08□□□□□ -0.64
FOXN3-206ENST00000554005 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
FOXN3-206ENST00000554005 ST18O60284 1047 aa11.07□□□□□ -0.64
FOXN3-206ENST00000554005 PTPREP23469 700 aa11.07□□□□□ -0.64
FOXN3-206ENST00000554005 PARP9Q8IXQ6 854 aa11.07□□□□□ -0.64
FOXN3-206ENST00000554005 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
FOXN3-206ENST00000554005 FAM161AQ3B820 660 aa11.06□□□□□ -0.64
FOXN3-206ENST00000554005 ADGRG1Q9Y653 693 aa11.06□□□□□ -0.64
FOXN3-206ENST00000554005 PHOX2BQ99453 314 aa11.04□□□□□ -0.64
FOXN3-206ENST00000554005 TTLL12Q14166 644 aaPredicted RBP11.03□□□□□ -0.64
FOXN3-206ENST00000554005 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
FOXN3-206ENST00000554005 METTL3Q86U44 580 aaKnown RBP11.03□□□□□ -0.64
FOXN3-206ENST00000554005 KCNK17Q96T54 332 aa11.03□□□□□ -0.64
FOXN3-206ENST00000554005 FAM198AQ9UFP1 575 aa11.03□□□□□ -0.64
FOXN3-206ENST00000554005 ERBB3P21860 1342 aa11.03□□□□□ -0.64
FOXN3-206ENST00000554005 OATP04181 439 aa11.02□□□□□ -0.65
FOXN3-206ENST00000554005 EMP3P54852 163 aa11.01□□□□□ -0.65
FOXN3-206ENST00000554005 PXYLP1Q8TE99 480 aa11.01□□□□□ -0.65
FOXN3-206ENST00000554005 MARVELD3Q96A59 401 aa11.01□□□□□ -0.65
FOXN3-206ENST00000554005 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
FOXN3-206ENST00000554005 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
FOXN3-206ENST00000554005 MDM2Q00987 491 aaPredicted RBP10.99□□□□□ -0.65
FOXN3-206ENST00000554005 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
FOXN3-206ENST00000554005 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
FOXN3-206ENST00000554005 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
FOXN3-206ENST00000554005 CLCN1P35523 988 aa10.98□□□□□ -0.65
FOXN3-206ENST00000554005 GIGYF2Q6Y7W6 1299 aaKnown RBP10.98□□□□□ -0.65
FOXN3-206ENST00000554005 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
FOXN3-206ENST00000554005 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
FOXN3-206ENST00000554005 FAM117AQ9C073 453 aa10.98□□□□□ -0.65
FOXN3-206ENST00000554005 PROX2Q3B8N5 592 aa10.97□□□□□ -0.65
FOXN3-206ENST00000554005 POTEEQ6S8J3 1075 aa10.97□□□□□ -0.65
FOXN3-206ENST00000554005 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
FOXN3-206ENST00000554005 C3orf80F5H4A9 247 aa10.96□□□□□ -0.65
FOXN3-206ENST00000554005 PSEN2P49810 448 aa10.96□□□□□ -0.65
FOXN3-206ENST00000554005 RBM46Q8TBY0 533 aaKnown RBP10.96□□□□□ -0.65
FOXN3-206ENST00000554005 GPCPD1Q9NPB8 672 aa10.96□□□□□ -0.65
FOXN3-206ENST00000554005 ZBED2Q9BTP6 218 aa10.95□□□□□ -0.66
FOXN3-206ENST00000554005 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
FOXN3-206ENST00000554005 ARHGAP33O14559 1287 aa10.94□□□□□ -0.66
FOXN3-206ENST00000554005 MS4A1P11836 297 aa10.94□□□□□ -0.66
FOXN3-206ENST00000554005 EYA1Q99502 592 aa10.94□□□□□ -0.66
FOXN3-206ENST00000554005 DAXXQ9UER7 740 aaPredicted RBP10.94□□□□□ -0.66
FOXN3-206ENST00000554005 PLEKHG3A1L390 1219 aa10.93□□□□□ -0.66
FOXN3-206ENST00000554005 NBPF26B4DH59 902 aa10.93□□□□□ -0.66
FOXN3-206ENST00000554005 LCE2DQ5TA82 110 aaPredicted RBP10.93□□□□□ -0.66
FOXN3-206ENST00000554005 NUDT18Q6ZVK8 323 aa10.93□□□□□ -0.66
FOXN3-206ENST00000554005 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
FOXN3-206ENST00000554005 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
FOXN3-206ENST00000554005 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
FOXN3-206ENST00000554005 ONECUT3O60422 494 aaPredicted RBP10.92□□□□□ -0.66
FOXN3-206ENST00000554005 PBX2P40425 430 aa10.92□□□□□ -0.66
FOXN3-206ENST00000554005 ZNF687Q8N1G0 1237 aa10.92□□□□□ -0.66
FOXN3-206ENST00000554005 TATDN2Q93075 761 aa10.92□□□□□ -0.66
FOXN3-206ENST00000554005 GTF3C3Q9Y5Q9 886 aa10.92□□□□□ -0.66
FOXN3-206ENST00000554005 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.91□□□□□ -0.66
FOXN3-206ENST00000554005 DMRTA1Q5VZB9 504 aa10.91□□□□□ -0.66
FOXN3-206ENST00000554005 PNMA3Q9UL41 463 aa10.91□□□□□ -0.66
FOXN3-206ENST00000554005 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
FOXN3-206ENST00000554005 RCCD1A6NED2 376 aa10.9□□□□□ -0.66
FOXN3-206ENST00000554005 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
FOXN3-206ENST00000554005 HS3ST6Q96QI5 342 aa10.9□□□□□ -0.66
FOXN3-206ENST00000554005 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
FOXN3-206ENST00000554005 SSTR3P32745 418 aaPredicted RBP10.89□□□□□ -0.67
FOXN3-206ENST00000554005 SLC4A5Q9BY07 1137 aa10.89□□□□□ -0.67
FOXN3-206ENST00000554005 KIAA1468Q9P260 1216 aa10.89□□□□□ -0.67
FOXN3-206ENST00000554005 SMAPO00193 183 aa10.88□□□□□ -0.67
FOXN3-206ENST00000554005 DNAJB2P25686 324 aa10.87□□□□□ -0.67
FOXN3-206ENST00000554005 RABGEF1Q9UJ41 708 aa10.86□□□□□ -0.67
FOXN3-206ENST00000554005 TMEM134Q9H6X4 195 aa10.85□□□□□ -0.67
FOXN3-206ENST00000554005 VPS9D1Q9Y2B5 631 aa10.85□□□□□ -0.67
FOXN3-206ENST00000554005 BEGAINQ9BUH8 593 aa10.83□□□□□ -0.68
FOXN3-206ENST00000554005 SEPT9Q9UHD8 586 aaPredicted RBP10.82□□□□□ -0.68
FOXN3-206ENST00000554005 GOPCQ9HD26 462 aa10.79□□□□□ -0.68
FOXN3-206ENST00000554005 TK2O00142 265 aa10.78□□□□□ -0.68
FOXN3-206ENST00000554005 CD46P15529 392 aa10.78□□□□□ -0.68
FOXN3-206ENST00000554005 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.685e-7■■■□□ 16.1
FOXN3-206ENST00000554005 SULF1Q8IWU6 871 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms