RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
EFCAB11-204ENST00000553871 IRF6O14896 467 aa7.58□□□□□ -1.2
EFCAB11-204ENST00000553871 PDE4DQ08499 809 aa7.58□□□□□ -1.2
EFCAB11-204ENST00000553871 TSR1Q2NL82 804 aaKnown RBP7.58□□□□□ -1.2
EFCAB11-204ENST00000553871 FECHP22830 423 aa7.57□□□□□ -1.2
EFCAB11-204ENST00000553871 GPR153Q6NV75 609 aa7.57□□□□□ -1.2
EFCAB11-204ENST00000553871 PSDA5PKW4 1024 aaPredicted RBP7.56□□□□□ -1.2
EFCAB11-204ENST00000553871 PPP4R3BQ5MIZ7 849 aa7.56□□□□□ -1.2
EFCAB11-204ENST00000553871 GPBP1L1Q9HC44 474 aaPredicted RBP7.56□□□□□ -1.2
EFCAB11-204ENST00000553871 TTLL12Q14166 644 aaPredicted RBP7.55□□□□□ -1.2
EFCAB11-204ENST00000553871 CERKQ8TCT0 537 aa7.55□□□□□ -1.2
EFCAB11-204ENST00000553871 DAXXQ9UER7 740 aaPredicted RBP7.55□□□□□ -1.2
EFCAB11-204ENST00000553871 LHX6Q9UPM6 363 aa7.55□□□□□ -1.2
EFCAB11-204ENST00000553871 C6orf132Q5T0Z8 1188 aa7.54□□□□□ -1.2
EFCAB11-204ENST00000553871 ADAM33Q9BZ11 813 aa7.54□□□□□ -1.2
EFCAB11-204ENST00000553871 KDM4CQ9H3R0 1056 aa7.54□□□□□ -1.2
EFCAB11-204ENST00000553871 NPDC1Q9NQX5 325 aaPredicted RBP7.53□□□□□ -1.2
EFCAB11-204ENST00000553871 HOXB1P14653 301 aaPredicted RBP7.52□□□□□ -1.21
EFCAB11-204ENST00000553871 AMHR2Q16671 573 aa7.51□□□□□ -1.21
EFCAB11-204ENST00000553871 KCNH8Q96L42 1107 aa7.51□□□□□ -1.21
EFCAB11-204ENST00000553871 GTF3C3Q9Y5Q9 886 aa7.51□□□□□ -1.21
EFCAB11-204ENST00000553871 PADI6Q6TGC4 694 aa7.5□□□□□ -1.21
EFCAB11-204ENST00000553871 PTPREP23469 700 aa7.49□□□□□ -1.21
EFCAB11-204ENST00000553871 PARP9Q8IXQ6 854 aa7.49□□□□□ -1.21
EFCAB11-204ENST00000553871 IL27Q8NEV9 243 aa7.49□□□□□ -1.21
EFCAB11-204ENST00000553871 BCL2L12Q9HB09 334 aa7.49□□□□□ -1.21
EFCAB11-204ENST00000553871 RBM27Q9P2N5 1060 aaKnown RBP7.49□□□□□ -1.21
EFCAB11-204ENST00000553871 OATP04181 439 aa7.48□□□□□ -1.21
EFCAB11-204ENST00000553871 CLCN1P35523 988 aa7.47□□□□□ -1.21
EFCAB11-204ENST00000553871 PRSS12P56730 875 aa7.47□□□□□ -1.21
EFCAB11-204ENST00000553871 CDCA7LQ96GN5 454 aa7.47□□□□□ -1.21
EFCAB11-204ENST00000553871 PPP1R3GB7ZBB8 358 aa7.46□□□□□ -1.22
EFCAB11-204ENST00000553871 MDM2Q00987 491 aaPredicted RBP7.46□□□□□ -1.22
EFCAB11-204ENST00000553871 FAM161AQ3B820 660 aa7.46□□□□□ -1.22
EFCAB11-204ENST00000553871 GIGYF2Q6Y7W6 1299 aaKnown RBP7.46□□□□□ -1.22
EFCAB11-204ENST00000553871 DDRGK1Q96HY6 314 aa7.46□□□□□ -1.22
EFCAB11-204ENST00000553871 METTL3Q86U44 580 aaKnown RBP7.45□□□□□ -1.22
EFCAB11-204ENST00000553871 RBM46Q8TBY0 533 aaKnown RBP7.45□□□□□ -1.22
EFCAB11-204ENST00000553871 KCNK17Q96T54 332 aa7.45□□□□□ -1.22
EFCAB11-204ENST00000553871 ADGRG1Q9Y653 693 aa7.45□□□□□ -1.22
EFCAB11-204ENST00000553871 ERBB3P21860 1342 aa7.45□□□□□ -1.22
EFCAB11-204ENST00000553871 COL9A1P20849 921 aa7.44□□□□□ -1.22
EFCAB11-204ENST00000553871 FAM117AQ9C073 453 aa7.44□□□□□ -1.22
EFCAB11-204ENST00000553871 GPCPD1Q9NPB8 672 aa7.44□□□□□ -1.22
EFCAB11-204ENST00000553871 NBPF26B4DH59 902 aa7.43□□□□□ -1.22
EFCAB11-204ENST00000553871 EMP3P54852 163 aa7.42□□□□□ -1.22
EFCAB11-204ENST00000553871 PACS2Q86VP3 889 aa7.42□□□□□ -1.22
EFCAB11-204ENST00000553871 TTC13Q8NBP0 860 aa7.42□□□□□ -1.22
EFCAB11-204ENST00000553871 PXYLP1Q8TE99 480 aa7.42□□□□□ -1.22
EFCAB11-204ENST00000553871 VARS2Q5ST30 1063 aaKnown RBP7.41□□□□□ -1.22
EFCAB11-204ENST00000553871 ERICH6Q7L0X2 663 aa7.41□□□□□ -1.22
EFCAB11-204ENST00000553871 NLRP7Q8WX94 980 aa7.41□□□□□ -1.22
EFCAB11-204ENST00000553871 FAM163AQ96GL9 167 aaPredicted RBP7.41□□□□□ -1.22
EFCAB11-204ENST00000553871 PHOX2BQ99453 314 aa7.41□□□□□ -1.22
EFCAB11-204ENST00000553871 TRIM6-TRIM34B2RNG4 842 aa7.4□□□□□ -1.22
EFCAB11-204ENST00000553871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.39□□□□□ -1.23
EFCAB11-204ENST00000553871 ST18O60284 1047 aa7.39□□□□□ -1.23
EFCAB11-204ENST00000553871 MS4A1P11836 297 aa7.39□□□□□ -1.23
EFCAB11-204ENST00000553871 REPIN1Q9BWE0 567 aaKnown RBP7.39□□□□□ -1.23
EFCAB11-204ENST00000553871 TSKSQ9UJT2 592 aa7.39□□□□□ -1.23
EFCAB11-204ENST00000553871 PNMA3Q9UL41 463 aa7.39□□□□□ -1.23
EFCAB11-204ENST00000553871 SSTR3P32745 418 aaPredicted RBP7.38□□□□□ -1.23
EFCAB11-204ENST00000553871 PROX2Q3B8N5 592 aa7.38□□□□□ -1.23
EFCAB11-204ENST00000553871 NUDT18Q6ZVK8 323 aa7.38□□□□□ -1.23
EFCAB11-204ENST00000553871 MARVELD3Q96A59 401 aa7.38□□□□□ -1.23
EFCAB11-204ENST00000553871 FAM198AQ9UFP1 575 aa7.38□□□□□ -1.23
EFCAB11-204ENST00000553871 PLEKHG3A1L390 1219 aa7.37□□□□□ -1.23
EFCAB11-204ENST00000553871 RCCD1A6NED2 376 aa7.37□□□□□ -1.23
EFCAB11-204ENST00000553871 PSEN2P49810 448 aa7.37□□□□□ -1.23
EFCAB11-204ENST00000553871 C14orf37Q86TY3 774 aa7.37□□□□□ -1.23
EFCAB11-204ENST00000553871 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
EFCAB11-204ENST00000553871 FAM217BQ9NTX9 383 aaPredicted RBP7.37□□□□□ -1.23
EFCAB11-204ENST00000553871 ATP1B4Q9UN42 357 aaPredicted RBP7.37□□□□□ -1.23
EFCAB11-204ENST00000553871 FAM205CA6NFA0 338 aa7.36□□□□□ -1.23
EFCAB11-204ENST00000553871 ARHGAP33O14559 1287 aa7.36□□□□□ -1.23
EFCAB11-204ENST00000553871 DNAJB2P25686 324 aa7.36□□□□□ -1.23
EFCAB11-204ENST00000553871 PBX2P40425 430 aa7.36□□□□□ -1.23
EFCAB11-204ENST00000553871 TATDN2Q93075 761 aa7.36□□□□□ -1.23
EFCAB11-204ENST00000553871 BEGAINQ9BUH8 593 aa7.36□□□□□ -1.23
EFCAB11-204ENST00000553871 PCMTD1Q96MG8 357 aaPredicted RBP7.35□□□□□ -1.23
EFCAB11-204ENST00000553871 EYA1Q99502 592 aa7.35□□□□□ -1.23
EFCAB11-204ENST00000553871 ZBED2Q9BTP6 218 aa7.35□□□□□ -1.23
EFCAB11-204ENST00000553871 RSPH6AQ9H0K4 717 aa7.35□□□□□ -1.23
EFCAB11-204ENST00000553871 KIAA1468Q9P260 1216 aa7.35□□□□□ -1.23
EFCAB11-204ENST00000553871 TIMELESSQ9UNS1 1208 aa7.35□□□□□ -1.23
EFCAB11-204ENST00000553871 SMAPO00193 183 aa7.34□□□□□ -1.23
EFCAB11-204ENST00000553871 ONECUT3O60422 494 aaPredicted RBP7.34□□□□□ -1.23
EFCAB11-204ENST00000553871 SULF1Q8IWU6 871 aa7.34□□□□□ -1.23
EFCAB11-204ENST00000553871 AXIN2Q9Y2T1 843 aa7.34□□□□□ -1.23
EFCAB11-204ENST00000553871 DDX11L8A8MPP1 907 aa7.32□□□□□ -1.24
EFCAB11-204ENST00000553871 SLC4A3P48751 1232 aa7.32□□□□□ -1.24
EFCAB11-204ENST00000553871 LCE2DQ5TA82 110 aaPredicted RBP7.32□□□□□ -1.24
EFCAB11-204ENST00000553871 TMEM134Q9H6X4 195 aa7.32□□□□□ -1.24
EFCAB11-204ENST00000553871 GOPCQ9HD26 462 aa7.32□□□□□ -1.24
EFCAB11-204ENST00000553871 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
EFCAB11-204ENST00000553871 HDGFP51858 240 aaKnown RBP7.31□□□□□ -1.24
EFCAB11-204ENST00000553871 SH3D19Q5HYK7 790 aa7.31□□□□□ -1.24
EFCAB11-204ENST00000553871 ZNF687Q8N1G0 1237 aa7.31□□□□□ -1.24
EFCAB11-204ENST00000553871 RDH13Q8NBN7 331 aa7.31□□□□□ -1.24
EFCAB11-204ENST00000553871 SEPT9Q9UHD8 586 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms