RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 VGFO15240 615 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1P3-201ENST00000553649 ANKRD13DQ6ZTN6 518 aa10.47□□□□□ -0.73
SMARCE1P3-201ENST00000553649 FBXO22Q8NEZ5 403 aa10.47□□□□□ -0.73
SMARCE1P3-201ENST00000553649 COL17A1Q9UMD9 1497 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1P3-201ENST00000553649 PRG4Q92954 1404 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1P3-201ENST00000553649 PBRM1Q86U86 1689 aa10.42□□□□□ -0.74
SMARCE1P3-201ENST00000553649 KIF3CO14782 793 aa10.42□□□□□ -0.74
SMARCE1P3-201ENST00000553649 PTGER2P43116 358 aa10.42□□□□□ -0.74
SMARCE1P3-201ENST00000553649 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMARCE1P3-201ENST00000553649 POTEEQ6S8J3 1075 aa10.42□□□□□ -0.74
SMARCE1P3-201ENST00000553649 CUX1P39880 1505 aa10.42□□□□□ -0.74
SMARCE1P3-201ENST00000553649 TSPOAP1O95153 1857 aa10.4□□□□□ -0.74
SMARCE1P3-201ENST00000553649 ADCY10Q96PN6 1610 aa10.4□□□□□ -0.74
SMARCE1P3-201ENST00000553649 NLRP6P59044 892 aa10.4□□□□□ -0.74
SMARCE1P3-201ENST00000553649 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.75
SMARCE1P3-201ENST00000553649 MFRPQ9BY79 579 aa10.39□□□□□ -0.75
SMARCE1P3-201ENST00000553649 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
SMARCE1P3-201ENST00000553649 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
SMARCE1P3-201ENST00000553649 C2orf72A6NCS6 295 aa10.38□□□□□ -0.75
SMARCE1P3-201ENST00000553649 NUDT7P0C024 238 aa10.37□□□□□ -0.75
SMARCE1P3-201ENST00000553649 PPRC1Q5VV67 1664 aaKnown RBP10.37□□□□□ -0.75
SMARCE1P3-201ENST00000553649 ADAMTS12P58397 1594 aa10.36□□□□□ -0.75
SMARCE1P3-201ENST00000553649 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
SMARCE1P3-201ENST00000553649 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
SMARCE1P3-201ENST00000553649 TOP2BQ02880 1626 aa10.36□□□□□ -0.75
SMARCE1P3-201ENST00000553649 SPATA31D1Q6ZQQ2 1576 aa10.35□□□□□ -0.75
SMARCE1P3-201ENST00000553649 LHX6Q9UPM6 363 aa10.35□□□□□ -0.75
SMARCE1P3-201ENST00000553649 CERKQ8TCT0 537 aa10.34□□□□□ -0.75
SMARCE1P3-201ENST00000553649 STK24Q9Y6E0 443 aa10.33□□□□□ -0.76
SMARCE1P3-201ENST00000553649 GLI2P10070 1586 aa10.31□□□□□ -0.76
SMARCE1P3-201ENST00000553649 PCDHGA4Q9Y5G9 962 aa10.31□□□□□ -0.76
SMARCE1P3-201ENST00000553649 FHAD1B1AJZ9 1412 aa10.31□□□□□ -0.76
SMARCE1P3-201ENST00000553649 SLC34A2O95436 690 aa10.3□□□□□ -0.76
SMARCE1P3-201ENST00000553649 PBX2P40425 430 aa10.3□□□□□ -0.76
SMARCE1P3-201ENST00000553649 PCF11O94913 1555 aaKnown RBP10.26□□□□□ -0.77
SMARCE1P3-201ENST00000553649 ASXL2Q76L83 1435 aa10.26□□□□□ -0.77
SMARCE1P3-201ENST00000553649 PTPRMP28827 1452 aa10.26□□□□□ -0.77
SMARCE1P3-201ENST00000553649 STK25O00506 426 aa10.25□□□□□ -0.77
SMARCE1P3-201ENST00000553649 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
SMARCE1P3-201ENST00000553649 PLB1Q6P1J6 1458 aa10.24□□□□□ -0.77
SMARCE1P3-201ENST00000553649 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
SMARCE1P3-201ENST00000553649 RUSC2Q8N2Y8 1516 aa10.23□□□□□ -0.77
SMARCE1P3-201ENST00000553649 PPP1R37O75864 691 aa10.23□□□□□ -0.77
SMARCE1P3-201ENST00000553649 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
SMARCE1P3-201ENST00000553649 TEX14Q8IWB6 1497 aa10.22□□□□□ -0.77
SMARCE1P3-201ENST00000553649 ABCC2Q92887 1545 aa10.22□□□□□ -0.77
SMARCE1P3-201ENST00000553649 EPRSP07814 1512 aaKnown RBP10.2□□□□□ -0.78
SMARCE1P3-201ENST00000553649 WRNQ14191 1432 aaPredicted RBP eCLIP10.2□□□□□ -0.78
SMARCE1P3-201ENST00000553649 HCSTQ9UBK5 93 aa10.2□□□□□ -0.78
SMARCE1P3-201ENST00000553649 TAOK2Q9UL54 1235 aa10.2□□□□□ -0.78
SMARCE1P3-201ENST00000553649 MAP3K4Q9Y6R4 1608 aa10.2□□□□□ -0.78
SMARCE1P3-201ENST00000553649 ARHGAP33O14559 1287 aa10.19□□□□□ -0.78
SMARCE1P3-201ENST00000553649 HSPA2P54652 639 aa10.19□□□□□ -0.78
SMARCE1P3-201ENST00000553649 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
SMARCE1P3-201ENST00000553649 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
SMARCE1P3-201ENST00000553649 KIF21BO75037 1637 aa10.18□□□□□ -0.78
SMARCE1P3-201ENST00000553649 HRO43593 1189 aa10.17□□□□□ -0.78
SMARCE1P3-201ENST00000553649 ADAMTSL3P82987 1691 aa10.17□□□□□ -0.78
SMARCE1P3-201ENST00000553649 PTPRGP23470 1445 aa10.16□□□□□ -0.78
SMARCE1P3-201ENST00000553649 RGL2O15211 777 aa10.16□□□□□ -0.78
SMARCE1P3-201ENST00000553649 PSEN2P49810 448 aa10.16□□□□□ -0.78
SMARCE1P3-201ENST00000553649 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1P3-201ENST00000553649 PTCD2Q8WV60 388 aaKnown RBP10.14□□□□□ -0.79
SMARCE1P3-201ENST00000553649 KIAA0586Q9BVV6 1533 aa10.13□□□□□ -0.79
SMARCE1P3-201ENST00000553649 PKD2Q13563 968 aa10.13□□□□□ -0.79
SMARCE1P3-201ENST00000553649 TK2O00142 265 aa10.12□□□□□ -0.79
SMARCE1P3-201ENST00000553649 UHRF1BP1LA0JNW5 1464 aa10.11□□□□□ -0.79
SMARCE1P3-201ENST00000553649 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1P3-201ENST00000553649 BIVM-ERCC5R4GMW8 1640 aa10.1□□□□□ -0.79
SMARCE1P3-201ENST00000553649 TTBK1Q5TCY1 1321 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1P3-201ENST00000553649 MAGI3Q5TCQ9 1506 aa10.08□□□□□ -0.8
SMARCE1P3-201ENST00000553649 KDM5BQ9UGL1 1544 aa10.08□□□□□ -0.8
SMARCE1P3-201ENST00000553649 TNIKQ9UKE5 1360 aa10.08□□□□□ -0.8
SMARCE1P3-201ENST00000553649 CUL7Q14999 1698 aa10.08□□□□□ -0.8
SMARCE1P3-201ENST00000553649 MADDQ8WXG6 1647 aa10.07□□□□□ -0.8
SMARCE1P3-201ENST00000553649 FOXK1P85037 733 aa10.07□□□□□ -0.8
SMARCE1P3-201ENST00000553649 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
SMARCE1P3-201ENST00000553649 KCTD12Q96CX2 325 aaKnown RBP10.07□□□□□ -0.8
SMARCE1P3-201ENST00000553649 UACAQ9BZF9 1416 aa10.07□□□□□ -0.8
SMARCE1P3-201ENST00000553649 DSG2Q14126 1118 aa10.04□□□□□ -0.8
SMARCE1P3-201ENST00000553649 CD109Q6YHK3 1445 aa10.04□□□□□ -0.8
SMARCE1P3-201ENST00000553649 BCORL1Q5H9F3 1711 aa10.04□□□□□ -0.8
SMARCE1P3-201ENST00000553649 GPHNQ9NQX3 736 aaPredicted RBP10.03□□□□□ -0.8
SMARCE1P3-201ENST00000553649 ARAP3Q8WWN8 1544 aa10.02□□□□□ -0.8
SMARCE1P3-201ENST00000553649 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.81
SMARCE1P3-201ENST00000553649 WDR7Q9Y4E6 1490 aa10.02□□□□□ -0.81
SMARCE1P3-201ENST00000553649 SUPT5HO00267 1087 aaKnown RBP10□□□□□ -0.81
SMARCE1P3-201ENST00000553649 KCNK17Q96T54 332 aa10□□□□□ -0.81
SMARCE1P3-201ENST00000553649 VPS9D1Q9Y2B5 631 aa10□□□□□ -0.81
SMARCE1P3-201ENST00000553649 ZCCHC11Q5TAX3 1644 aaKnown RBP10□□□□□ -0.81
SMARCE1P3-201ENST00000553649 CARMIL2Q6F5E8 1435 aa9.99□□□□□ -0.81
SMARCE1P3-201ENST00000553649 YEATS2Q9ULM3 1422 aa9.99□□□□□ -0.81
SMARCE1P3-201ENST00000553649 RIMS1Q86UR5 1692 aaKnown RBP9.98□□□□□ -0.81
SMARCE1P3-201ENST00000553649 ARID4BQ4LE39 1312 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1P3-201ENST00000553649 LTBP4Q8N2S1 1624 aa9.97□□□□□ -0.81
SMARCE1P3-201ENST00000553649 IGF1RP08069 1367 aa9.97□□□□□ -0.81
SMARCE1P3-201ENST00000553649 IQSEC2Q5JU85 1478 aa9.97□□□□□ -0.81
SMARCE1P3-201ENST00000553649 RAPGEF3O95398 923 aa9.96□□□□□ -0.82
SMARCE1P3-201ENST00000553649 PTPN5P54829 565 aa9.96□□□□□ -0.82
SMARCE1P3-201ENST00000553649 CFAP43Q8NDM7 1665 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms