RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 AGLP35573 1532 aa12.18□□□□□ -0.46
SNRPN-206ENST00000553597 RNF17Q9BXT8 1623 aaKnown RBP12.18□□□□□ -0.46
SNRPN-206ENST00000553597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNRPN-206ENST00000553597 MROH1Q8NDA8 1641 aa12.16□□□□□ -0.46
SNRPN-206ENST00000553597 CFAP65Q6ZU64 1925 aaKnown RBP12.16□□□□□ -0.46
SNRPN-206ENST00000553597 KIF3BO15066 747 aa12.16□□□□□ -0.46
SNRPN-206ENST00000553597 NCOA1Q15788 1441 aa12.16□□□□□ -0.46
SNRPN-206ENST00000553597 DHX29Q7Z478 1369 aaKnown RBP12.16□□□□□ -0.46
SNRPN-206ENST00000553597 C3P01024 1663 aa12.16□□□□□ -0.46
SNRPN-206ENST00000553597 GGT6Q6P531 493 aa12.15□□□□□ -0.46
SNRPN-206ENST00000553597 DEPDC5O75140 1603 aa12.15□□□□□ -0.47
SNRPN-206ENST00000553597 ERBINQ96RT1 1412 aa12.14□□□□□ -0.47
SNRPN-206ENST00000553597 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
SNRPN-206ENST00000553597 ZC3H13Q5T200 1668 aaKnown RBP12.13□□□□□ -0.47
SNRPN-206ENST00000553597 CAMSAP1Q5T5Y3 1602 aa12.13□□□□□ -0.47
SNRPN-206ENST00000553597 UNC13BO14795 1591 aa12.13□□□□□ -0.47
SNRPN-206ENST00000553597 MROH2AA6NES4 1674 aa12.13□□□□□ -0.47
SNRPN-206ENST00000553597 ANKRD50Q9ULJ7 1429 aa12.12□□□□□ -0.47
SNRPN-206ENST00000553597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.473e-11■■□□□ 13.3
SNRPN-206ENST00000553597 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
SNRPN-206ENST00000553597 PRDM15P57071 1507 aaPredicted RBP12.11□□□□□ -0.47
SNRPN-206ENST00000553597 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
SNRPN-206ENST00000553597 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
SNRPN-206ENST00000553597 NAIPQ13075 1403 aa12.1□□□□□ -0.47
SNRPN-206ENST00000553597 PTPRMP28827 1452 aa12.09□□□□□ -0.47
SNRPN-206ENST00000553597 ABCC3O15438 1527 aa12.09□□□□□ -0.47
SNRPN-206ENST00000553597 HFM1A2PYH4 1435 aa12.08□□□□□ -0.48
SNRPN-206ENST00000553597 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.48
SNRPN-206ENST00000553597 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
SNRPN-206ENST00000553597 TET3O43151 1660 aa12.06□□□□□ -0.48
SNRPN-206ENST00000553597 CEBPAP49715 358 aaPredicted RBP12.06□□□□□ -0.48
SNRPN-206ENST00000553597 PREX1Q8TCU6 1659 aa12.06□□□□□ -0.48
SNRPN-206ENST00000553597 E9PCH4 1651 aa12.05□□□□□ -0.48
SNRPN-206ENST00000553597 WASHC2CQ9Y4E1 1318 aa12.05□□□□□ -0.48
SNRPN-206ENST00000553597 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
SNRPN-206ENST00000553597 KANK1Q14678 1352 aa12.05□□□□□ -0.48
SNRPN-206ENST00000553597 CNTLNQ9NXG0 1405 aa12.04□□□□□ -0.48
SNRPN-206ENST00000553597 EFCAB6Q5THR3 1501 aa12.03□□□□□ -0.48
SNRPN-206ENST00000553597 FAM135AQ9P2D6 1515 aa12.03□□□□□ -0.48
SNRPN-206ENST00000553597 TRIM52Q96A61 297 aa12.03□□□□□ -0.48
SNRPN-206ENST00000553597 MYO3AQ8NEV4 1616 aa12.03□□□□□ -0.48
SNRPN-206ENST00000553597 SETD5Q9C0A6 1442 aa12.02□□□□□ -0.49
SNRPN-206ENST00000553597 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
SNRPN-206ENST00000553597 NUP155O75694 1391 aa12.01□□□□□ -0.49
SNRPN-206ENST00000553597 RAB3GAP2Q9H2M9 1393 aa12.01□□□□□ -0.49
SNRPN-206ENST00000553597 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
SNRPN-206ENST00000553597 PPP4R3CPQ6ZMV5 832 aa12□□□□□ -0.49
SNRPN-206ENST00000553597 ZMYM3Q14202 1370 aa12□□□□□ -0.49
SNRPN-206ENST00000553597 PZPP20742 1482 aa12□□□□□ -0.49
SNRPN-206ENST00000553597 MYO5BQ9ULV0 1848 aa11.99□□□□□ -0.49
SNRPN-206ENST00000553597 LMTK2Q8IWU2 1503 aa11.98□□□□□ -0.49
SNRPN-206ENST00000553597 ERVK-7P63135 1459 aa11.98□□□□□ -0.49
SNRPN-206ENST00000553597 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
SNRPN-206ENST00000553597 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
SNRPN-206ENST00000553597 SYNMO15061 1565 aa11.97□□□□□ -0.49
SNRPN-206ENST00000553597 NPATQ14207 1427 aa11.97□□□□□ -0.49
SNRPN-206ENST00000553597 SPATA31D1Q6ZQQ2 1576 aa11.96□□□□□ -0.49
SNRPN-206ENST00000553597 PIK3C2BO00750 1634 aa11.96□□□□□ -0.5
SNRPN-206ENST00000553597 UGGT1Q9NYU2 1555 aa11.96□□□□□ -0.5
SNRPN-206ENST00000553597 SETD1BQ9UPS6 1966 aaKnown RBP11.96□□□□□ -0.5
SNRPN-206ENST00000553597 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
SNRPN-206ENST00000553597 TNRQ92752 1358 aa11.94□□□□□ -0.5
SNRPN-206ENST00000553597 PCGF6Q9BYE7 350 aa11.94□□□□□ -0.5
SNRPN-206ENST00000553597 UHRF1BP1Q6BDS2 1440 aa11.94□□□□□ -0.5
SNRPN-206ENST00000553597 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
SNRPN-206ENST00000553597 UBR1Q8IWV7 1749 aa11.93□□□□□ -0.5
SNRPN-206ENST00000553597 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
SNRPN-206ENST00000553597 LMTK3Q96Q04 1460 aa11.92□□□□□ -0.5
SNRPN-206ENST00000553597 KIF1BO60333 1816 aa11.92□□□□□ -0.5
SNRPN-206ENST00000553597 RPRD2Q5VT52 1461 aaKnown RBP11.91□□□□□ -0.5
SNRPN-206ENST00000553597 ARHGAP31Q2M1Z3 1444 aa11.91□□□□□ -0.5
SNRPN-206ENST00000553597 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
SNRPN-206ENST00000553597 HSPA2P54652 639 aa11.9□□□□□ -0.5
SNRPN-206ENST00000553597 PKD2Q13563 968 aa11.9□□□□□ -0.5
SNRPN-206ENST00000553597 NOS1P29475 1434 aa11.88□□□□□ -0.51
SNRPN-206ENST00000553597 ADGRB3O60242 1522 aa11.88□□□□□ -0.51
SNRPN-206ENST00000553597 TRPM2O94759 1503 aa11.88□□□□□ -0.51
SNRPN-206ENST00000553597 A2ML1A8K2U0 1454 aa11.88□□□□□ -0.51
SNRPN-206ENST00000553597 MPHOSPH9Q99550 1183 aa11.87□□□□□ -0.51
SNRPN-206ENST00000553597 NLRP1Q9C000 1473 aa11.87□□□□□ -0.51
SNRPN-206ENST00000553597 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
SNRPN-206ENST00000553597 STRCQ7RTU9 1775 aa11.86□□□□□ -0.51
SNRPN-206ENST00000553597 TMEM131LA2VDJ0 1609 aa11.86□□□□□ -0.51
SNRPN-206ENST00000553597 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
SNRPN-206ENST00000553597 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
SNRPN-206ENST00000553597 PLA2R1Q13018 1463 aa11.83□□□□□ -0.52
SNRPN-206ENST00000553597 PTPRTO14522 1441 aa11.82□□□□□ -0.52
SNRPN-206ENST00000553597 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
SNRPN-206ENST00000553597 IDI1Q13907 227 aa11.81□□□□□ -0.52
SNRPN-206ENST00000553597 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
SNRPN-206ENST00000553597 PPLO60437 1756 aa11.8□□□□□ -0.52
SNRPN-206ENST00000553597 CCDC144AA2RUR9 1427 aa11.8□□□□□ -0.52
SNRPN-206ENST00000553597 IQGAP1P46940 1657 aa11.8□□□□□ -0.52
SNRPN-206ENST00000553597 IFT172Q9UG01 1749 aa11.8□□□□□ -0.52
SNRPN-206ENST00000553597 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
SNRPN-206ENST00000553597 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
SNRPN-206ENST00000553597 HRCP23327 699 aa11.78□□□□□ -0.52
SNRPN-206ENST00000553597 ZNF326Q5BKZ1 582 aaKnown RBP11.78□□□□□ -0.52
SNRPN-206ENST00000553597 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
SNRPN-206ENST00000553597 NCKAP5LQ9HCH0 1330 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms