RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-204ENST00000553576 RIOK3O14730 519 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-204ENST00000553576 PBX2P40425 430 aa9.13□□□□□ -0.95
VIPAS39-204ENST00000553576 RANGAP1P46060 587 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-204ENST00000553576 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
VIPAS39-204ENST00000553576 RNF25Q96BH1 459 aaPredicted RBP9.12□□□□□ -0.95
VIPAS39-204ENST00000553576 SAMD9Q5K651 1589 aa9.12□□□□□ -0.95
VIPAS39-204ENST00000553576 TIAM1Q13009 1591 aa9.11□□□□□ -0.95
VIPAS39-204ENST00000553576 GRIN2BQ13224 1484 aa9.1□□□□□ -0.95
VIPAS39-204ENST00000553576 KANK4Q5T7N3 995 aaPredicted RBP9.1□□□□□ -0.95
VIPAS39-204ENST00000553576 POTEEQ6S8J3 1075 aa9.1□□□□□ -0.95
VIPAS39-204ENST00000553576 RRBP1Q9P2E9 1410 aaKnown RBP9.1□□□□□ -0.95
VIPAS39-204ENST00000553576 THOC2Q8NI27 1593 aaKnown RBP9.1□□□□□ -0.95
VIPAS39-204ENST00000553576 ADAMTS12P58397 1594 aa9.09□□□□□ -0.95
VIPAS39-204ENST00000553576 NUDT7P0C024 238 aa9.09□□□□□ -0.95
VIPAS39-204ENST00000553576 CFAP43Q8NDM7 1665 aa9.09□□□□□ -0.95
VIPAS39-204ENST00000553576 FMN1Q68DA7 1419 aa9.08□□□□□ -0.96
VIPAS39-204ENST00000553576 CASKIN1Q8WXD9 1431 aa9.08□□□□□ -0.96
VIPAS39-204ENST00000553576 VGFO15240 615 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-204ENST00000553576 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
VIPAS39-204ENST00000553576 AXIN2Q9Y2T1 843 aa9.08□□□□□ -0.96
VIPAS39-204ENST00000553576 FYCO1Q9BQS8 1478 aa9.08□□□□□ -0.96
VIPAS39-204ENST00000553576 LRRC9Q6ZRR7 1453 aa9.07□□□□□ -0.96
VIPAS39-204ENST00000553576 TTBK1Q5TCY1 1321 aaPredicted RBP9.06□□□□□ -0.96
VIPAS39-204ENST00000553576 KIF3CO14782 793 aa9.06□□□□□ -0.96
VIPAS39-204ENST00000553576 NLRP6P59044 892 aa9.06□□□□□ -0.96
VIPAS39-204ENST00000553576 FBXO22Q8NEZ5 403 aa9.06□□□□□ -0.96
VIPAS39-204ENST00000553576 LHX6Q9UPM6 363 aa9.06□□□□□ -0.96
VIPAS39-204ENST00000553576 ERCC6Q03468 1493 aa9.06□□□□□ -0.96
VIPAS39-204ENST00000553576 PCF11O94913 1555 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-204ENST00000553576 CCER1Q8TC90 406 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-204ENST00000553576 ZNF608Q9ULD9 1512 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-204ENST00000553576 C2orf72A6NCS6 295 aa9.04□□□□□ -0.96
VIPAS39-204ENST00000553576 FHOD3Q2V2M9 1422 aa9.04□□□□□ -0.96
VIPAS39-204ENST00000553576 EIF4G3O43432 1585 aaKnown RBP9.03□□□□□ -0.96
VIPAS39-204ENST00000553576 IQGAP2Q13576 1575 aa9.03□□□□□ -0.96
VIPAS39-204ENST00000553576 SNAPC4Q5SXM2 1469 aa9.03□□□□□ -0.96
VIPAS39-204ENST00000553576 UGGT2Q9NYU1 1516 aa9.03□□□□□ -0.96
VIPAS39-204ENST00000553576 LRRIQ1Q96JM4 1722 aa9.02□□□□□ -0.96
VIPAS39-204ENST00000553576 MAGI1Q96QZ7 1491 aaPredicted RBP9.02□□□□□ -0.96
VIPAS39-204ENST00000553576 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.02□□□□□ -0.97
VIPAS39-204ENST00000553576 ADGRD1Q6QNK2 874 aa9.02□□□□□ -0.97
VIPAS39-204ENST00000553576 PCDHGA4Q9Y5G9 962 aa9.02□□□□□ -0.97
VIPAS39-204ENST00000553576 CCNB3Q8WWL7 1395 aa9.01□□□□□ -0.97
VIPAS39-204ENST00000553576 KIAA0586Q9BVV6 1533 aa9.01□□□□□ -0.97
VIPAS39-204ENST00000553576 SLC34A2O95436 690 aa9.01□□□□□ -0.97
VIPAS39-204ENST00000553576 CLSPNQ9HAW4 1339 aa9.01□□□□□ -0.97
VIPAS39-204ENST00000553576 P3H3Q8IVL6 736 aa9□□□□□ -0.97
VIPAS39-204ENST00000553576 GRIN2AQ12879 1464 aa8.99□□□□□ -0.97
VIPAS39-204ENST00000553576 ARHGAP33O14559 1287 aa8.98□□□□□ -0.97
VIPAS39-204ENST00000553576 MFRPQ9BY79 579 aa8.98□□□□□ -0.97
VIPAS39-204ENST00000553576 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-204ENST00000553576 SYNJ2O15056 1496 aa8.97□□□□□ -0.97
VIPAS39-204ENST00000553576 CCDC18Q5T9S5 1454 aa8.96□□□□□ -0.97
VIPAS39-204ENST00000553576 PHLDB1Q86UU1 1377 aa8.96□□□□□ -0.98
VIPAS39-204ENST00000553576 HECW1Q76N89 1606 aa8.95□□□□□ -0.98
VIPAS39-204ENST00000553576 KIAA0556O60303 1618 aa8.94□□□□□ -0.98
VIPAS39-204ENST00000553576 SUPT6HQ7KZ85 1726 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-204ENST00000553576 TK2O00142 265 aa8.94□□□□□ -0.98
VIPAS39-204ENST00000553576 HRO43593 1189 aa8.94□□□□□ -0.98
VIPAS39-204ENST00000553576 NUP160Q12769 1436 aa8.94□□□□□ -0.98
VIPAS39-204ENST00000553576 ARHGEF11O15085 1522 aa8.94□□□□□ -0.98
VIPAS39-204ENST00000553576 DISP1Q96F81 1524 aa8.94□□□□□ -0.98
VIPAS39-204ENST00000553576 PSDA5PKW4 1024 aaPredicted RBP8.93□□□□□ -0.98
VIPAS39-204ENST00000553576 STK24Q9Y6E0 443 aa8.93□□□□□ -0.98
VIPAS39-204ENST00000553576 EHBP1L1Q8N3D4 1523 aa8.93□□□□□ -0.98
VIPAS39-204ENST00000553576 CEP170Q5SW79 1584 aa8.92□□□□□ -0.98
VIPAS39-204ENST00000553576 MTUS2Q5JR59 1369 aa8.92□□□□□ -0.98
VIPAS39-204ENST00000553576 DHX57Q6P158 1386 aaKnown RBP8.92□□□□□ -0.98
VIPAS39-204ENST00000553576 DMRTA1Q5VZB9 504 aa8.92□□□□□ -0.98
VIPAS39-204ENST00000553576 CHMP7Q8WUX9 453 aaPredicted RBP8.92□□□□□ -0.98
VIPAS39-204ENST00000553576 EPRSP07814 1512 aaKnown RBP8.91□□□□□ -0.98
VIPAS39-204ENST00000553576 TMC2Q8TDI7 906 aa8.91□□□□□ -0.98
VIPAS39-204ENST00000553576 ATP1B4Q9UN42 357 aaPredicted RBP8.91□□□□□ -0.98
VIPAS39-204ENST00000553576 FGD6Q6ZV73 1430 aa8.9□□□□□ -0.98
VIPAS39-204ENST00000553576 SETD5Q9C0A6 1442 aa8.9□□□□□ -0.98
VIPAS39-204ENST00000553576 KDM4FA0A1W2PPD8 638 aa8.9□□□□□ -0.98
VIPAS39-204ENST00000553576 PSEN2P49810 448 aa8.9□□□□□ -0.98
VIPAS39-204ENST00000553576 TAOK2Q9UL54 1235 aa8.9□□□□□ -0.98
VIPAS39-204ENST00000553576 NCOA2Q15596 1464 aa8.89□□□□□ -0.99
VIPAS39-204ENST00000553576 KCTD12Q96CX2 325 aaKnown RBP8.89□□□□□ -0.99
VIPAS39-204ENST00000553576 RAPGEF6Q8TEU7 1601 aa8.89□□□□□ -0.99
VIPAS39-204ENST00000553576 MAGI3Q5TCQ9 1506 aa8.89□□□□□ -0.99
VIPAS39-204ENST00000553576 MYOM3Q5VTT5 1437 aa8.88□□□□□ -0.99
VIPAS39-204ENST00000553576 JPH4Q96JJ6 628 aa8.88□□□□□ -0.99
VIPAS39-204ENST00000553576 CARMIL2Q6F5E8 1435 aa8.88□□□□□ -0.99
VIPAS39-204ENST00000553576 TCOF1Q13428 1488 aaKnown RBP8.87□□□□□ -0.99
VIPAS39-204ENST00000553576 MIA2Q96PC5 1412 aa8.87□□□□□ -0.99
VIPAS39-204ENST00000553576 RAB3GAP2Q9H2M9 1393 aa8.86□□□□□ -0.99
VIPAS39-204ENST00000553576 STK25O00506 426 aa8.86□□□□□ -0.99
VIPAS39-204ENST00000553576 PTPN23Q9H3S7 1636 aa8.86□□□□□ -0.99
VIPAS39-204ENST00000553576 NUP153P49790 1475 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-204ENST00000553576 FAM50AQ14320 339 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-204ENST00000553576 PTCD2Q8WV60 388 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-204ENST00000553576 CHD1O14646 1710 aa8.84□□□□□ -0.99
VIPAS39-204ENST00000553576 CDK11AQ9UQ88 783 aaPredicted RBP8.84□□□□□ -0.99
VIPAS39-204ENST00000553576 PPP4R3BQ5MIZ7 849 aa8.83□□□□□ -1
VIPAS39-204ENST00000553576 ADCY10Q96PN6 1610 aa8.83□□□□□ -1
VIPAS39-204ENST00000553576 ACIN1Q9UKV3 1341 aaKnown RBP8.82□□□□□ -1
VIPAS39-204ENST00000553576 ABCA8O94911 1581 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms