RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 FAM135AQ9P2D6 1515 aa23.83■■□□□ 1.41
SDR39U1-205ENST00000553546 MYOM3Q5VTT5 1437 aa23.83■■□□□ 1.4
SDR39U1-205ENST00000553546 APLP2Q06481 763 aa23.81■■□□□ 1.4
SDR39U1-205ENST00000553546 PTPRKQ15262 1439 aa23.8■■□□□ 1.4
SDR39U1-205ENST00000553546 MAST1Q9Y2H9 1570 aa23.8■■□□□ 1.4
SDR39U1-205ENST00000553546 MYO3AQ8NEV4 1616 aa23.78■■□□□ 1.4
SDR39U1-205ENST00000553546 KIF3BO15066 747 aa23.78■■□□□ 1.4
SDR39U1-205ENST00000553546 ZNF142P52746 1687 aaPredicted RBP23.78■■□□□ 1.4
SDR39U1-205ENST00000553546 KDM5DQ9BY66 1539 aa23.77■■□□□ 1.4
SDR39U1-205ENST00000553546 CEP170BQ9Y4F5 1589 aaPredicted RBP23.74■■□□□ 1.39
SDR39U1-205ENST00000553546 ZNF335Q9H4Z2 1342 aaPredicted RBP23.73■■□□□ 1.39
SDR39U1-205ENST00000553546 EIF2AK4Q9P2K8 1649 aaKnown RBP23.7■■□□□ 1.39
SDR39U1-205ENST00000553546 PLA2R1Q13018 1463 aa23.7■■□□□ 1.38
SDR39U1-205ENST00000553546 WASHC2CQ9Y4E1 1318 aa23.7■■□□□ 1.38
SDR39U1-205ENST00000553546 PZPP20742 1482 aa23.69■■□□□ 1.38
SDR39U1-205ENST00000553546 RNF17Q9BXT8 1623 aaKnown RBP23.69■■□□□ 1.38
SDR39U1-205ENST00000553546 UBAP1LF5GYI3 381 aa23.68■■□□□ 1.38
SDR39U1-205ENST00000553546 PTPN23Q9H3S7 1636 aa23.67■■□□□ 1.38
SDR39U1-205ENST00000553546 NCKAP5LQ9HCH0 1330 aa23.67■■□□□ 1.38
SDR39U1-205ENST00000553546 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
SDR39U1-205ENST00000553546 A2ML1A8K2U0 1454 aa23.67■■□□□ 1.38
SDR39U1-205ENST00000553546 TCOF1Q13428 1488 aaKnown RBP23.66■■□□□ 1.38
SDR39U1-205ENST00000553546 SHANK2Q9UPX8 1470 aa23.66■■□□□ 1.38
SDR39U1-205ENST00000553546 ZC3H13Q5T200 1668 aaKnown RBP23.66■■□□□ 1.38
SDR39U1-205ENST00000553546 CROCC2H7BZ55 1655 aa23.65■■□□□ 1.38
SDR39U1-205ENST00000553546 TNRQ92752 1358 aa23.65■■□□□ 1.38
SDR39U1-205ENST00000553546 DUOX2Q9NRD8 1548 aa23.64■■□□□ 1.38
SDR39U1-205ENST00000553546 PKD2Q13563 968 aa23.64■■□□□ 1.37
SDR39U1-205ENST00000553546 FGD6Q6ZV73 1430 aa23.62■■□□□ 1.37
SDR39U1-205ENST00000553546 DNMT1P26358 1616 aaKnown RBP23.62■■□□□ 1.37
SDR39U1-205ENST00000553546 ABCC5O15440 1437 aa23.59■■□□□ 1.37
SDR39U1-205ENST00000553546 ABCC3O15438 1527 aa23.59■■□□□ 1.37
SDR39U1-205ENST00000553546 FBXO31Q5XUX0 539 aaPredicted RBP23.59■■□□□ 1.37
SDR39U1-205ENST00000553546 NLRP1Q9C000 1473 aa23.58■■□□□ 1.37
SDR39U1-205ENST00000553546 KIF15Q9NS87 1388 aa23.58■■□□□ 1.37
SDR39U1-205ENST00000553546 DAPK1P53355 1430 aa23.58■■□□□ 1.36
SDR39U1-205ENST00000553546 MROH1Q8NDA8 1641 aa23.57■■□□□ 1.36
SDR39U1-205ENST00000553546 ERBINQ96RT1 1412 aa23.57■■□□□ 1.36
SDR39U1-205ENST00000553546 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
SDR39U1-205ENST00000553546 PRDM15P57071 1507 aaPredicted RBP23.53■■□□□ 1.36
SDR39U1-205ENST00000553546 CEP152O94986 1710 aa23.52■■□□□ 1.36
SDR39U1-205ENST00000553546 NEURL4Q96JN8 1562 aa23.52■■□□□ 1.36
SDR39U1-205ENST00000553546 HSPA1LP34931 641 aa23.51■■□□□ 1.35
SDR39U1-205ENST00000553546 UGGT1Q9NYU2 1555 aa23.51■■□□□ 1.35
SDR39U1-205ENST00000553546 ANKRD30AQ9BXX3 1397 aa23.51■■□□□ 1.35
SDR39U1-205ENST00000553546 THEMISQ8N1K5 641 aaPredicted RBP23.5■■□□□ 1.35
SDR39U1-205ENST00000553546 RRP7BPQ9NSQ0 103 aa23.5■■□□□ 1.35
SDR39U1-205ENST00000553546 ERVK-7P63135 1459 aa23.49■■□□□ 1.35
SDR39U1-205ENST00000553546 DEPDC5O75140 1603 aa23.48■■□□□ 1.35
SDR39U1-205ENST00000553546 CPS1P31327 1500 aa23.47■■□□□ 1.35
SDR39U1-205ENST00000553546 ALKQ9UM73 1620 aa23.46■■□□□ 1.35
SDR39U1-205ENST00000553546 ARHGAP31Q2M1Z3 1444 aa23.45■■□□□ 1.34
SDR39U1-205ENST00000553546 KANK1Q14678 1352 aa23.45■■□□□ 1.34
SDR39U1-205ENST00000553546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.45■■□□□ 1.34
SDR39U1-205ENST00000553546 SCAF1Q9H7N4 1312 aaKnown RBP23.45■■□□□ 1.34
SDR39U1-205ENST00000553546 ANKLE2Q86XL3 938 aa23.45■■□□□ 1.34
SDR39U1-205ENST00000553546 ADGRL2O95490 1459 aa23.43■■□□□ 1.34
SDR39U1-205ENST00000553546 PIP4K2BP78356 416 aa23.43■■□□□ 1.34
SDR39U1-205ENST00000553546 CHIC2Q9UKJ5 165 aa23.42■■□□□ 1.34
SDR39U1-205ENST00000553546 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
SDR39U1-205ENST00000553546 CFAP65Q6ZU64 1925 aaKnown RBP23.41■■□□□ 1.34
SDR39U1-205ENST00000553546 MED14O60244 1454 aa23.4■■□□□ 1.34
SDR39U1-205ENST00000553546 VWDEQ8N2E2 1590 aa23.4■■□□□ 1.34
SDR39U1-205ENST00000553546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.39■■□□□ 1.336e-6■□□□□ 8.3
SDR39U1-205ENST00000553546 LMTK2Q8IWU2 1503 aa23.38■■□□□ 1.33
SDR39U1-205ENST00000553546 NPHP4O75161 1426 aaPredicted RBP23.37■■□□□ 1.33
SDR39U1-205ENST00000553546 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
SDR39U1-205ENST00000553546 TOM1O60784 492 aa23.36■■□□□ 1.33
SDR39U1-205ENST00000553546 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
SDR39U1-205ENST00000553546 ANKRD50Q9ULJ7 1429 aa23.32■■□□□ 1.32
SDR39U1-205ENST00000553546 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
SDR39U1-205ENST00000553546 STRCP1A6NGW2 1772 aa23.3■■□□□ 1.32
SDR39U1-205ENST00000553546 EFCAB6Q5THR3 1501 aa23.3■■□□□ 1.32
SDR39U1-205ENST00000553546 SLIT1O75093 1534 aa23.29■■□□□ 1.32
SDR39U1-205ENST00000553546 SCAF11Q99590 1463 aaKnown RBP23.29■■□□□ 1.32
SDR39U1-205ENST00000553546 ARHGAP23Q9P227 1491 aa23.28■■□□□ 1.32
SDR39U1-205ENST00000553546 KDM5AP29375 1690 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-205ENST00000553546 PIK3C2BO00750 1634 aa23.27■■□□□ 1.32
SDR39U1-205ENST00000553546 RPRD2Q5VT52 1461 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-205ENST00000553546 SYNMO15061 1565 aa23.24■■□□□ 1.31
SDR39U1-205ENST00000553546 STAG3Q9UJ98 1225 aa23.24■■□□□ 1.31
SDR39U1-205ENST00000553546 ROCK1Q13464 1354 aa23.24■■□□□ 1.31
SDR39U1-205ENST00000553546 NOS1P29475 1434 aa23.24■■□□□ 1.31
SDR39U1-205ENST00000553546 EID1Q9Y6B2 187 aa23.23■■□□□ 1.31
SDR39U1-205ENST00000553546 UNC13BO14795 1591 aa23.22■■□□□ 1.31
SDR39U1-205ENST00000553546 TET3O43151 1660 aa23.22■■□□□ 1.31
SDR39U1-205ENST00000553546 TXNDC2Q86VQ3 553 aa23.21■■□□□ 1.31
SDR39U1-205ENST00000553546 LRRC7Q96NW7 1537 aa23.21■■□□□ 1.31
SDR39U1-205ENST00000553546 TMEM2Q9UHN6 1383 aa23.2■■□□□ 1.3
SDR39U1-205ENST00000553546 IDI1Q13907 227 aa23.19■■□□□ 1.3
SDR39U1-205ENST00000553546 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
SDR39U1-205ENST00000553546 SLC52A1Q9NWF4 448 aa23.19■■□□□ 1.3
SDR39U1-205ENST00000553546 LTKP29376 864 aa23.18■■□□□ 1.3
SDR39U1-205ENST00000553546 GCC2Q8IWJ2 1684 aa23.18■■□□□ 1.3
SDR39U1-205ENST00000553546 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
SDR39U1-205ENST00000553546 RGS17Q9UGC6 210 aaPredicted RBP23.14■■□□□ 1.29
SDR39U1-205ENST00000553546 IQGAP3Q86VI3 1631 aa23.12■■□□□ 1.29
SDR39U1-205ENST00000553546 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-205ENST00000553546 ITGAEP38570 1179 aa23.1■■□□□ 1.29
SDR39U1-205ENST00000553546 PPARGC1BQ86YN6 1023 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms