RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 ZNF644Q9H582 1327 aaPredicted RBP22.1■■□□□ 1.13
ABCD4-218ENST00000553486 CNTLNQ9NXG0 1405 aa22.1■■□□□ 1.13
ABCD4-218ENST00000553486 C3P01024 1663 aa22.09■■□□□ 1.13
ABCD4-218ENST00000553486 ATP7AQ04656 1500 aa22.09■■□□□ 1.13
ABCD4-218ENST00000553486 SETD1BQ9UPS6 1966 aaKnown RBP22.07■■□□□ 1.12
ABCD4-218ENST00000553486 INO80Q9ULG1 1556 aaPredicted RBP22.07■■□□□ 1.12
ABCD4-218ENST00000553486 ADGBQ8N7X0 1667 aa22.05■■□□□ 1.12
ABCD4-218ENST00000553486 PLXNC1O60486 1568 aa22.04■■□□□ 1.12
ABCD4-218ENST00000553486 CERKQ8TCT0 537 aa22.03■■□□□ 1.12
ABCD4-218ENST00000553486 TRIM52Q96A61 297 aa22.03■■□□□ 1.12
ABCD4-218ENST00000553486 DMRT2Q9Y5R5 561 aa22.03■■□□□ 1.12
ABCD4-218ENST00000553486 CROCC2H7BZ55 1655 aa22.03■■□□□ 1.12
ABCD4-218ENST00000553486 A2MP01023 1474 aa22.03■■□□□ 1.12
ABCD4-218ENST00000553486 STRCQ7RTU9 1775 aa22.02■■□□□ 1.11
ABCD4-218ENST00000553486 MBD5Q9P267 1494 aa22.01■■□□□ 1.11
ABCD4-218ENST00000553486 NPATQ14207 1427 aa22■■□□□ 1.11
ABCD4-218ENST00000553486 ZMYM3Q14202 1370 aa21.99■■□□□ 1.11
ABCD4-218ENST00000553486 TONSLQ96HA7 1378 aa21.99■■□□□ 1.11
ABCD4-218ENST00000553486 PPP1R15AO75807 674 aaPredicted RBP21.99■■□□□ 1.11
ABCD4-218ENST00000553486 MROH2AA6NES4 1674 aa21.98■■□□□ 1.11
ABCD4-218ENST00000553486 ADGRL2O95490 1459 aa21.98■■□□□ 1.11
ABCD4-218ENST00000553486 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
ABCD4-218ENST00000553486 RTEL1-TNFRSF6BF6WH68 1400 aa21.95■■□□□ 1.1
ABCD4-218ENST00000553486 NCOA1Q15788 1441 aa21.95■■□□□ 1.1
ABCD4-218ENST00000553486 GGT6Q6P531 493 aa21.95■■□□□ 1.1
ABCD4-218ENST00000553486 ANKRD30AQ9BXX3 1397 aa21.94■■□□□ 1.1
ABCD4-218ENST00000553486 PTPRTO14522 1441 aa21.94■■□□□ 1.1
ABCD4-218ENST00000553486 SHANK2Q9UPX8 1470 aa21.93■■□□□ 1.1
ABCD4-218ENST00000553486 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
ABCD4-218ENST00000553486 CLTCQ00610 1675 aaKnown RBP21.91■■□□□ 1.1
ABCD4-218ENST00000553486 ARHGEF5Q12774 1597 aa21.9■■□□□ 1.1
ABCD4-218ENST00000553486 CCDC141Q6ZP82 1450 aa21.9■■□□□ 1.1
ABCD4-218ENST00000553486 DHX29Q7Z478 1369 aaKnown RBP21.9■■□□□ 1.1
ABCD4-218ENST00000553486 MIER1Q8N108 512 aa21.9■■□□□ 1.1
ABCD4-218ENST00000553486 TSPY4P0CV99 314 aa21.87■■□□□ 1.09
ABCD4-218ENST00000553486 TSPY10P0CW01 314 aa21.87■■□□□ 1.09
ABCD4-218ENST00000553486 RSPH4AQ5TD94 716 aa21.87■■□□□ 1.09
ABCD4-218ENST00000553486 CAMSAP1Q5T5Y3 1602 aa21.87■■□□□ 1.09
ABCD4-218ENST00000553486 MYO3AQ8NEV4 1616 aa21.84■■□□□ 1.09
ABCD4-218ENST00000553486 SLC4A1APQ9BWU0 796 aaKnown RBP21.83■■□□□ 1.08
ABCD4-218ENST00000553486 ZNF142P52746 1687 aaPredicted RBP21.82■■□□□ 1.08
ABCD4-218ENST00000553486 CEP170BQ9Y4F5 1589 aaPredicted RBP21.82■■□□□ 1.08
ABCD4-218ENST00000553486 KIF3BO15066 747 aa21.82■■□□□ 1.08
ABCD4-218ENST00000553486 ANKRD50Q9ULJ7 1429 aa21.82■■□□□ 1.08
ABCD4-218ENST00000553486 PLA2R1Q13018 1463 aa21.81■■□□□ 1.08
ABCD4-218ENST00000553486 LTBP4Q8N2S1 1624 aa21.81■■□□□ 1.08
ABCD4-218ENST00000553486 ANKRD30BQ9BXX2 1392 aa21.81■■□□□ 1.08
ABCD4-218ENST00000553486 CENPBP07199 599 aaPredicted RBP21.8■■□□□ 1.08
ABCD4-218ENST00000553486 PZPP20742 1482 aa21.79■■□□□ 1.08
ABCD4-218ENST00000553486 NCKAP5LQ9HCH0 1330 aa21.79■■□□□ 1.08
ABCD4-218ENST00000553486 FAM135AQ9P2D6 1515 aa21.78■■□□□ 1.08
ABCD4-218ENST00000553486 KDM5DQ9BY66 1539 aa21.77■■□□□ 1.08
ABCD4-218ENST00000553486 PKD2Q13563 968 aa21.77■■□□□ 1.08
ABCD4-218ENST00000553486 FOXD1Q16676 465 aa21.76■■□□□ 1.07
ABCD4-218ENST00000553486 RPRD2Q5VT52 1461 aaKnown RBP21.75■■□□□ 1.07
ABCD4-218ENST00000553486 WASHC2CQ9Y4E1 1318 aa21.75■■□□□ 1.07
ABCD4-218ENST00000553486 A2ML1A8K2U0 1454 aa21.75■■□□□ 1.07
ABCD4-218ENST00000553486 KIF15Q9NS87 1388 aa21.74■■□□□ 1.07
ABCD4-218ENST00000553486 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
ABCD4-218ENST00000553486 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
ABCD4-218ENST00000553486 IQSEC2Q5JU85 1478 aa21.73■■□□□ 1.07
ABCD4-218ENST00000553486 TNRQ92752 1358 aa21.72■■□□□ 1.07
ABCD4-218ENST00000553486 ZNF335Q9H4Z2 1342 aaPredicted RBP21.71■■□□□ 1.07
ABCD4-218ENST00000553486 L3MBTL2Q969R5 705 aa21.68■■□□□ 1.06
ABCD4-218ENST00000553486 NUP155O75694 1391 aa21.68■■□□□ 1.06
ABCD4-218ENST00000553486 RNF17Q9BXT8 1623 aaKnown RBP21.65■■□□□ 1.06
ABCD4-218ENST00000553486 NLRP1Q9C000 1473 aa21.63■■□□□ 1.05
ABCD4-218ENST00000553486 ABCC3O15438 1527 aa21.62■■□□□ 1.05
ABCD4-218ENST00000553486 DDX10Q13206 875 aaKnown RBP21.62■■□□□ 1.05
ABCD4-218ENST00000553486 HIRIP3Q9BW71 556 aaPredicted RBP21.62■■□□□ 1.05
ABCD4-218ENST00000553486 EIF2AK4Q9P2K8 1649 aaKnown RBP21.61■■□□□ 1.05
ABCD4-218ENST00000553486 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
ABCD4-218ENST00000553486 THEMISQ8N1K5 641 aaPredicted RBP21.59■■□□□ 1.05
ABCD4-218ENST00000553486 NEURL4Q96JN8 1562 aa21.59■■□□□ 1.05
ABCD4-218ENST00000553486 ZC3H13Q5T200 1668 aaKnown RBP21.59■■□□□ 1.05
ABCD4-218ENST00000553486 UGGT1Q9NYU2 1555 aa21.59■■□□□ 1.05
ABCD4-218ENST00000553486 DUOX2Q9NRD8 1548 aa21.58■■□□□ 1.05
ABCD4-218ENST00000553486 MROH1Q8NDA8 1641 aa21.58■■□□□ 1.05
ABCD4-218ENST00000553486 ANKLE2Q86XL3 938 aa21.57■■□□□ 1.04
ABCD4-218ENST00000553486 UNC13BO14795 1591 aa21.57■■□□□ 1.04
ABCD4-218ENST00000553486 POLR1AO95602 1720 aaPredicted RBP21.57■■□□□ 1.04
ABCD4-218ENST00000553486 EIF4G2P78344 907 aaKnown RBP eCLIP21.56■■□□□ 1.04
ABCD4-218ENST00000553486 SPATA31D1Q6ZQQ2 1576 aa21.56■■□□□ 1.04
ABCD4-218ENST00000553486 UBAP1LF5GYI3 381 aa21.55■■□□□ 1.04
ABCD4-218ENST00000553486 ERVK-7P63135 1459 aa21.54■■□□□ 1.04
ABCD4-218ENST00000553486 DISP3Q9P2K9 1392 aa21.54■■□□□ 1.04
ABCD4-218ENST00000553486 HSPA5P11021 654 aaKnown RBP21.53■■□□□ 1.04
ABCD4-218ENST00000553486 ERBINQ96RT1 1412 aa21.53■■□□□ 1.04
ABCD4-218ENST00000553486 NBPF8Q3BBV2 869 aa21.52■■□□□ 1.04
ABCD4-218ENST00000553486 MED14O60244 1454 aa21.52■■□□□ 1.04
ABCD4-218ENST00000553486 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
ABCD4-218ENST00000553486 PRDM15P57071 1507 aaPredicted RBP21.51■■□□□ 1.03
ABCD4-218ENST00000553486 DEPDC5O75140 1603 aa21.5■■□□□ 1.03
ABCD4-218ENST00000553486 NPHP4O75161 1426 aaPredicted RBP21.5■■□□□ 1.03
ABCD4-218ENST00000553486 CPS1P31327 1500 aa21.5■■□□□ 1.03
ABCD4-218ENST00000553486 IQGAP3Q86VI3 1631 aa21.49■■□□□ 1.03
ABCD4-218ENST00000553486 CEP152O94986 1710 aa21.48■■□□□ 1.03
ABCD4-218ENST00000553486 ARHGAP31Q2M1Z3 1444 aa21.48■■□□□ 1.03
ABCD4-218ENST00000553486 VWDEQ8N2E2 1590 aa21.46■■□□□ 1.03
ABCD4-218ENST00000553486 ANP32CO43423 234 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms