RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 YTHDC1Q96MU7 727 aaKnown RBP7.89□□□□□ -1.15
TMEM106C-221ENST00000553217 SUPT16HQ9Y5B9 1047 aaKnown RBP7.89□□□□□ -1.15
TMEM106C-221ENST00000553217 SETD1BQ9UPS6 1966 aaKnown RBP7.89□□□□□ -1.15
TMEM106C-221ENST00000553217 NCOA1Q15788 1441 aa7.88□□□□□ -1.15
TMEM106C-221ENST00000553217 ZNF335Q9H4Z2 1342 aaPredicted RBP7.88□□□□□ -1.15
TMEM106C-221ENST00000553217 LTBP4Q8N2S1 1624 aa7.88□□□□□ -1.15
TMEM106C-221ENST00000553217 CAMSAP2Q08AD1 1489 aa7.87□□□□□ -1.15
TMEM106C-221ENST00000553217 NCOA2Q15596 1464 aa7.87□□□□□ -1.15
TMEM106C-221ENST00000553217 MBD5Q9P267 1494 aa7.87□□□□□ -1.15
TMEM106C-221ENST00000553217 FANCIQ9NVI1 1328 aa7.87□□□□□ -1.15
TMEM106C-221ENST00000553217 MROH2AA6NES4 1674 aa7.87□□□□□ -1.15
TMEM106C-221ENST00000553217 FBXO31Q5XUX0 539 aaPredicted RBP7.87□□□□□ -1.15
TMEM106C-221ENST00000553217 ILDR2Q71H61 639 aa7.87□□□□□ -1.15
TMEM106C-221ENST00000553217 PTPRKQ15262 1439 aa7.86□□□□□ -1.15
TMEM106C-221ENST00000553217 CEP170BQ9Y4F5 1589 aaPredicted RBP7.86□□□□□ -1.15
TMEM106C-221ENST00000553217 CNTLNQ9NXG0 1405 aa7.86□□□□□ -1.15
TMEM106C-221ENST00000553217 KIAA1107Q9UPP5 1409 aa7.86□□□□□ -1.15
TMEM106C-221ENST00000553217 DISP3Q9P2K9 1392 aa7.85□□□□□ -1.15
TMEM106C-221ENST00000553217 KIF3BO15066 747 aa7.85□□□□□ -1.15
TMEM106C-221ENST00000553217 KANK4Q5T7N3 995 aaPredicted RBP7.85□□□□□ -1.15
TMEM106C-221ENST00000553217 ZNF142P52746 1687 aaPredicted RBP7.85□□□□□ -1.15
TMEM106C-221ENST00000553217 PTPRTO14522 1441 aa7.85□□□□□ -1.15
TMEM106C-221ENST00000553217 PLEKHH2Q8IVE3 1493 aa7.84□□□□□ -1.15
TMEM106C-221ENST00000553217 CCDC141Q6ZP82 1450 aa7.83□□□□□ -1.16
TMEM106C-221ENST00000553217 CFAP65Q6ZU64 1925 aaKnown RBP7.83□□□□□ -1.16
TMEM106C-221ENST00000553217 DNMT1P26358 1616 aaKnown RBP7.82□□□□□ -1.16
TMEM106C-221ENST00000553217 NPATQ14207 1427 aa7.82□□□□□ -1.16
TMEM106C-221ENST00000553217 MIER1Q8N108 512 aa7.82□□□□□ -1.16
TMEM106C-221ENST00000553217 VPS8Q8N3P4 1428 aa7.82□□□□□ -1.16
TMEM106C-221ENST00000553217 TSHZ2Q9NRE2 1034 aa7.82□□□□□ -1.16
TMEM106C-221ENST00000553217 DMRT2Q9Y5R5 561 aa7.82□□□□□ -1.16
TMEM106C-221ENST00000553217 DHX29Q7Z478 1369 aaKnown RBP7.82□□□□□ -1.16
TMEM106C-221ENST00000553217 CEP152O94986 1710 aa7.81□□□□□ -1.16
TMEM106C-221ENST00000553217 SPATA31D1Q6ZQQ2 1576 aa7.81□□□□□ -1.16
TMEM106C-221ENST00000553217 NEURL4Q96JN8 1562 aa7.81□□□□□ -1.16
TMEM106C-221ENST00000553217 UBAP1LF5GYI3 381 aa7.81□□□□□ -1.16
TMEM106C-221ENST00000553217 CCER2I3L3R5 266 aa7.81□□□□□ -1.16
TMEM106C-221ENST00000553217 LRRC9Q6ZRR7 1453 aa7.81□□□□□ -1.16
TMEM106C-221ENST00000553217 KDM5DQ9BY66 1539 aa7.8□□□□□ -1.16
TMEM106C-221ENST00000553217 TNRQ92752 1358 aa7.8□□□□□ -1.16
TMEM106C-221ENST00000553217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.8□□□□□ -1.16
TMEM106C-221ENST00000553217 POLR1AO95602 1720 aaPredicted RBP7.8□□□□□ -1.16
TMEM106C-221ENST00000553217 A2ML1A8K2U0 1454 aa7.8□□□□□ -1.16
TMEM106C-221ENST00000553217 TCOF1Q13428 1488 aaKnown RBP7.8□□□□□ -1.16
TMEM106C-221ENST00000553217 PIP4K2BP78356 416 aa7.79□□□□□ -1.16
TMEM106C-221ENST00000553217 WASHC2CQ9Y4E1 1318 aa7.78□□□□□ -1.16
TMEM106C-221ENST00000553217 RTEL1-TNFRSF6BF6WH68 1400 aa7.78□□□□□ -1.16
TMEM106C-221ENST00000553217 MROH1Q8NDA8 1641 aa7.78□□□□□ -1.16
TMEM106C-221ENST00000553217 PZPP20742 1482 aa7.78□□□□□ -1.16
TMEM106C-221ENST00000553217 PLA2R1Q13018 1463 aa7.78□□□□□ -1.16
TMEM106C-221ENST00000553217 ARHGEF5Q12774 1597 aa7.78□□□□□ -1.16
TMEM106C-221ENST00000553217 ABCC3O15438 1527 aa7.77□□□□□ -1.17
TMEM106C-221ENST00000553217 STRCP1A6NGW2 1772 aa7.76□□□□□ -1.17
TMEM106C-221ENST00000553217 TSPY4P0CV99 314 aa7.76□□□□□ -1.17
TMEM106C-221ENST00000553217 TSPY10P0CW01 314 aa7.76□□□□□ -1.17
TMEM106C-221ENST00000553217 PKD2Q13563 968 aa7.76□□□□□ -1.17
TMEM106C-221ENST00000553217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.76□□□□□ -1.17
TMEM106C-221ENST00000553217 CHIC2Q9UKJ5 165 aa7.76□□□□□ -1.17
TMEM106C-221ENST00000553217 MAP3K1Q13233 1512 aa7.76□□□□□ -1.17
TMEM106C-221ENST00000553217 MYOM3Q5VTT5 1437 aa7.76□□□□□ -1.17
TMEM106C-221ENST00000553217 UGGT1Q9NYU2 1555 aa7.76□□□□□ -1.17
TMEM106C-221ENST00000553217 RNF17Q9BXT8 1623 aaKnown RBP7.75□□□□□ -1.17
TMEM106C-221ENST00000553217 HSPA1LP34931 641 aa7.75□□□□□ -1.17
TMEM106C-221ENST00000553217 RRP7BPQ9NSQ0 103 aa7.75□□□□□ -1.17
TMEM106C-221ENST00000553217 MIA2Q96PC5 1412 aa7.75□□□□□ -1.17
TMEM106C-221ENST00000553217 VWDEQ8N2E2 1590 aa7.75□□□□□ -1.17
TMEM106C-221ENST00000553217 MAST1Q9Y2H9 1570 aa7.75□□□□□ -1.17
TMEM106C-221ENST00000553217 PTPN23Q9H3S7 1636 aa7.74□□□□□ -1.17
TMEM106C-221ENST00000553217 CROCC2H7BZ55 1655 aa7.74□□□□□ -1.17
TMEM106C-221ENST00000553217 NPHP4O75161 1426 aaPredicted RBP7.74□□□□□ -1.17
TMEM106C-221ENST00000553217 ERVK-7P63135 1459 aa7.74□□□□□ -1.17
TMEM106C-221ENST00000553217 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
TMEM106C-221ENST00000553217 ABCC5O15440 1437 aa7.73□□□□□ -1.17
TMEM106C-221ENST00000553217 USP35Q9P2H5 1018 aa7.73□□□□□ -1.17
TMEM106C-221ENST00000553217 IQSEC2Q5JU85 1478 aa7.73□□□□□ -1.17
TMEM106C-221ENST00000553217 SHANK2Q9UPX8 1470 aa7.73□□□□□ -1.17
TMEM106C-221ENST00000553217 IQGAP1P46940 1657 aa7.73□□□□□ -1.17
TMEM106C-221ENST00000553217 KIF15Q9NS87 1388 aa7.72□□□□□ -1.17
TMEM106C-221ENST00000553217 UBR1Q8IWV7 1749 aa7.72□□□□□ -1.17
TMEM106C-221ENST00000553217 RRBP1Q9P2E9 1410 aaKnown RBP7.72□□□□□ -1.17
TMEM106C-221ENST00000553217 ANKLE2Q86XL3 938 aa7.72□□□□□ -1.17
TMEM106C-221ENST00000553217 RBM33Q96EV2 1170 aaKnown RBP7.72□□□□□ -1.17
TMEM106C-221ENST00000553217 FAM135AQ9P2D6 1515 aa7.72□□□□□ -1.17
TMEM106C-221ENST00000553217 EIF2AK4Q9P2K8 1649 aaKnown RBP7.71□□□□□ -1.17
TMEM106C-221ENST00000553217 DAPK1P53355 1430 aa7.71□□□□□ -1.17
TMEM106C-221ENST00000553217 ZC3H13Q5T200 1668 aaKnown RBP7.71□□□□□ -1.18
TMEM106C-221ENST00000553217 LTKP29376 864 aa7.71□□□□□ -1.18
TMEM106C-221ENST00000553217 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
TMEM106C-221ENST00000553217 MED1Q15648 1581 aaPredicted RBP7.71□□□□□ -1.18
TMEM106C-221ENST00000553217 PIK3C2BO00750 1634 aa7.7□□□□□ -1.18
TMEM106C-221ENST00000553217 NLRP1Q9C000 1473 aa7.7□□□□□ -1.18
TMEM106C-221ENST00000553217 DUOX2Q9NRD8 1548 aa7.7□□□□□ -1.18
TMEM106C-221ENST00000553217 SOCS7O14512 581 aa7.7□□□□□ -1.18
TMEM106C-221ENST00000553217 RSPH4AQ5TD94 716 aa7.7□□□□□ -1.18
TMEM106C-221ENST00000553217 THEMISQ8N1K5 641 aaPredicted RBP7.7□□□□□ -1.18
TMEM106C-221ENST00000553217 CPS1P31327 1500 aa7.69□□□□□ -1.18
TMEM106C-221ENST00000553217 RTL5Q5HYW3 569 aaPredicted RBP7.69□□□□□ -1.18
TMEM106C-221ENST00000553217 DEPDC5O75140 1603 aa7.69□□□□□ -1.18
TMEM106C-221ENST00000553217 DHX57Q6P158 1386 aaKnown RBP7.69□□□□□ -1.18
TMEM106C-221ENST00000553217 FGD6Q6ZV73 1430 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms