RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 FAM69CQ0P6D2 419 aa11.67□□□□□ -0.54
RAB5B-210ENST00000553116 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
RAB5B-210ENST00000553116 POGZQ7Z3K3 1410 aa11.66□□□□□ -0.54
RAB5B-210ENST00000553116 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAB5B-210ENST00000553116 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
RAB5B-210ENST00000553116 KIDINS220Q9ULH0 1771 aa11.65□□□□□ -0.54
RAB5B-210ENST00000553116 MAGI2Q86UL8 1455 aa11.65□□□□□ -0.54
RAB5B-210ENST00000553116 NEO1Q92859 1461 aa11.65□□□□□ -0.54
RAB5B-210ENST00000553116 NBPF8Q3BBV2 869 aa11.65□□□□□ -0.54
RAB5B-210ENST00000553116 RAPGEF3O95398 923 aa11.65□□□□□ -0.55
RAB5B-210ENST00000553116 YTHDC1Q96MU7 727 aaKnown RBP11.65□□□□□ -0.55
RAB5B-210ENST00000553116 TSPOAP1O95153 1857 aa11.64□□□□□ -0.55
RAB5B-210ENST00000553116 HSPA5P11021 654 aaKnown RBP11.64□□□□□ -0.55
RAB5B-210ENST00000553116 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
RAB5B-210ENST00000553116 DHX29Q7Z478 1369 aaKnown RBP11.64□□□□□ -0.55
RAB5B-210ENST00000553116 HECW2Q9P2P5 1572 aa11.64□□□□□ -0.55
RAB5B-210ENST00000553116 MAP3K4Q9Y6R4 1608 aa11.63□□□□□ -0.55
RAB5B-210ENST00000553116 DCAF11Q8TEB1 546 aa11.63□□□□□ -0.55
RAB5B-210ENST00000553116 EIF2AK4Q9P2K8 1649 aaKnown RBP11.62□□□□□ -0.55
RAB5B-210ENST00000553116 KDM5CP41229 1560 aa11.62□□□□□ -0.55
RAB5B-210ENST00000553116 A2MP01023 1474 aa11.62□□□□□ -0.55
RAB5B-210ENST00000553116 DEPDC5O75140 1603 aa11.61□□□□□ -0.55
RAB5B-210ENST00000553116 DIP2BQ9P265 1576 aa11.61□□□□□ -0.55
RAB5B-210ENST00000553116 GLI2P10070 1586 aa11.61□□□□□ -0.55
RAB5B-210ENST00000553116 MLH3Q9UHC1 1453 aa11.6□□□□□ -0.55
RAB5B-210ENST00000553116 E9PCH4 1651 aa11.6□□□□□ -0.55
RAB5B-210ENST00000553116 GGT6Q6P531 493 aa11.6□□□□□ -0.55
RAB5B-210ENST00000553116 PLA2R1Q13018 1463 aa11.59□□□□□ -0.55
RAB5B-210ENST00000553116 TET3O43151 1660 aa11.59□□□□□ -0.55
RAB5B-210ENST00000553116 CENPBP07199 599 aaPredicted RBP11.58□□□□□ -0.56
RAB5B-210ENST00000553116 ABCA6Q8N139 1617 aa11.58□□□□□ -0.56
RAB5B-210ENST00000553116 PRDM15P57071 1507 aaPredicted RBP11.58□□□□□ -0.56
RAB5B-210ENST00000553116 SPHKAPQ2M3C7 1700 aa11.57□□□□□ -0.56
RAB5B-210ENST00000553116 RICTORQ6R327 1708 aa11.57□□□□□ -0.56
RAB5B-210ENST00000553116 CARD11Q9BXL7 1154 aa11.57□□□□□ -0.56
RAB5B-210ENST00000553116 CEP152O94986 1710 aa11.56□□□□□ -0.56
RAB5B-210ENST00000553116 POLR3GLQ9BT43 218 aa11.56□□□□□ -0.56
RAB5B-210ENST00000553116 USP47Q96K76 1375 aa11.56□□□□□ -0.56
RAB5B-210ENST00000553116 MROH1Q8NDA8 1641 aa11.55□□□□□ -0.56
RAB5B-210ENST00000553116 ATP10AO60312 1499 aa11.55□□□□□ -0.56
RAB5B-210ENST00000553116 ANP32CO43423 234 aa11.55□□□□□ -0.56
RAB5B-210ENST00000553116 UHRF1BP1Q6BDS2 1440 aa11.55□□□□□ -0.56
RAB5B-210ENST00000553116 CFAP65Q6ZU64 1925 aaKnown RBP11.55□□□□□ -0.56
RAB5B-210ENST00000553116 ROCK2O75116 1388 aaKnown RBP11.55□□□□□ -0.56
RAB5B-210ENST00000553116 RALGAPBQ86X10 1494 aa11.54□□□□□ -0.56
RAB5B-210ENST00000553116 TRPM2O94759 1503 aa11.54□□□□□ -0.56
RAB5B-210ENST00000553116 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
RAB5B-210ENST00000553116 VWDEQ8N2E2 1590 aa11.54□□□□□ -0.56
RAB5B-210ENST00000553116 DIP2CQ9Y2E4 1556 aa11.54□□□□□ -0.56
RAB5B-210ENST00000553116 WASHC2CQ9Y4E1 1318 aa11.54□□□□□ -0.56
RAB5B-210ENST00000553116 RNF17Q9BXT8 1623 aaKnown RBP11.54□□□□□ -0.56
RAB5B-210ENST00000553116 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
RAB5B-210ENST00000553116 EFCAB6Q5THR3 1501 aa11.53□□□□□ -0.56
RAB5B-210ENST00000553116 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.56
RAB5B-210ENST00000553116 PPRC1Q5VV67 1664 aaKnown RBP11.52□□□□□ -0.57
RAB5B-210ENST00000553116 PRAG1Q86YV5 1406 aa11.51□□□□□ -0.57
RAB5B-210ENST00000553116 CLTCL1P53675 1640 aa11.51□□□□□ -0.57
RAB5B-210ENST00000553116 CHGAP10645 457 aaKnown RBP11.51□□□□□ -0.57
RAB5B-210ENST00000553116 KIF13AQ9H1H9 1805 aa11.51□□□□□ -0.57
RAB5B-210ENST00000553116 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
RAB5B-210ENST00000553116 CCDC7Q96M83 1385 aa11.5□□□□□ -0.57
RAB5B-210ENST00000553116 PTPRTO14522 1441 aa11.5□□□□□ -0.57
RAB5B-210ENST00000553116 SPATA31E1Q6ZUB1 1445 aa11.5□□□□□ -0.57
RAB5B-210ENST00000553116 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
RAB5B-210ENST00000553116 UGGT1Q9NYU2 1555 aa11.49□□□□□ -0.57
RAB5B-210ENST00000553116 KIF1BO60333 1816 aa11.49□□□□□ -0.57
RAB5B-210ENST00000553116 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
RAB5B-210ENST00000553116 LMTK2Q8IWU2 1503 aa11.48□□□□□ -0.57
RAB5B-210ENST00000553116 KIF7Q2M1P5 1343 aa11.48□□□□□ -0.57
RAB5B-210ENST00000553116 POLR1AO95602 1720 aaPredicted RBP11.48□□□□□ -0.57
RAB5B-210ENST00000553116 BCORL1Q5H9F3 1711 aa11.48□□□□□ -0.57
RAB5B-210ENST00000553116 ABCC3O15438 1527 aa11.47□□□□□ -0.57
RAB5B-210ENST00000553116 ZMYM4Q5VZL5 1548 aa11.47□□□□□ -0.57
RAB5B-210ENST00000553116 ST20-MTHFSA0A0A6YYL1 179 aa11.47□□□□□ -0.57
RAB5B-210ENST00000553116 NBPF1Q3BBV0 1214 aa11.47□□□□□ -0.57
RAB5B-210ENST00000553116 NPATQ14207 1427 aa11.47□□□□□ -0.57
RAB5B-210ENST00000553116 CAMSAP1Q5T5Y3 1602 aa11.46□□□□□ -0.57
RAB5B-210ENST00000553116 CNTLNQ9NXG0 1405 aa11.46□□□□□ -0.57
RAB5B-210ENST00000553116 MYT1Q01538 1121 aa11.45□□□□□ -0.58
RAB5B-210ENST00000553116 MLECQ14165 292 aa11.44□□□□□ -0.58
RAB5B-210ENST00000553116 CNGB1Q14028 1251 aaPredicted RBP11.44□□□□□ -0.58
RAB5B-210ENST00000553116 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
RAB5B-210ENST00000553116 ZC3H13Q5T200 1668 aaKnown RBP11.43□□□□□ -0.58
RAB5B-210ENST00000553116 MADDQ8WXG6 1647 aa11.43□□□□□ -0.58
RAB5B-210ENST00000553116 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
RAB5B-210ENST00000553116 MROH2AA6NES4 1674 aa11.42□□□□□ -0.58
RAB5B-210ENST00000553116 TRHP20396 242 aaPredicted RBP11.42□□□□□ -0.58
RAB5B-210ENST00000553116 CCER2I3L3R5 266 aa11.41□□□□□ -0.58
RAB5B-210ENST00000553116 ESF1Q9H501 851 aaKnown RBP11.41□□□□□ -0.58
RAB5B-210ENST00000553116 GPRASP1Q5JY77 1395 aa11.41□□□□□ -0.58
RAB5B-210ENST00000553116 LAMC1P11047 1609 aa11.4□□□□□ -0.58
RAB5B-210ENST00000553116 ARID4BQ4LE39 1312 aaPredicted RBP11.4□□□□□ -0.58
RAB5B-210ENST00000553116 COL17A1Q9UMD9 1497 aaPredicted RBP11.4□□□□□ -0.59
RAB5B-210ENST00000553116 SIGLEC1Q9BZZ2 1709 aa11.39□□□□□ -0.59
RAB5B-210ENST00000553116 ARHGEF40Q8TER5 1519 aa11.39□□□□□ -0.59
RAB5B-210ENST00000553116 ADGRB3O60242 1522 aa11.38□□□□□ -0.59
RAB5B-210ENST00000553116 NOS1P29475 1434 aa11.38□□□□□ -0.59
RAB5B-210ENST00000553116 NEURL4Q96JN8 1562 aa11.38□□□□□ -0.59
RAB5B-210ENST00000553116 ADGRF5Q8IZF2 1346 aa11.38□□□□□ -0.59
RAB5B-210ENST00000553116 CFAP70Q5T0N1 1121 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms