RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 SLC4A1APQ9BWU0 796 aaKnown RBP10.12□□□□□ -0.79
BEST3-212ENST00000553096 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
BEST3-212ENST00000553096 KIF15Q9NS87 1388 aa10.11□□□□□ -0.79
BEST3-212ENST00000553096 PDE4CQ08493 712 aa10.11□□□□□ -0.79
BEST3-212ENST00000553096 NBPF8Q3BBV2 869 aa10.11□□□□□ -0.79
BEST3-212ENST00000553096 ABCC1P33527 1531 aa10.11□□□□□ -0.79
BEST3-212ENST00000553096 FAM135AQ9P2D6 1515 aa10.1□□□□□ -0.79
BEST3-212ENST00000553096 BCORL1Q5H9F3 1711 aa10.09□□□□□ -0.79
BEST3-212ENST00000553096 IQGAP3Q86VI3 1631 aa10.09□□□□□ -0.79
BEST3-212ENST00000553096 HSPA5P11021 654 aaKnown RBP10.09□□□□□ -0.79
BEST3-212ENST00000553096 ABCA9Q8IUA7 1624 aa10.08□□□□□ -0.8
BEST3-212ENST00000553096 KDM5CP41229 1560 aa10.07□□□□□ -0.8
BEST3-212ENST00000553096 SPATA31E1Q6ZUB1 1445 aa10.07□□□□□ -0.8
BEST3-212ENST00000553096 FAM69CQ0P6D2 419 aa10.07□□□□□ -0.8
BEST3-212ENST00000553096 WASHC2AQ641Q2 1341 aa10.07□□□□□ -0.8
BEST3-212ENST00000553096 PKD2Q13563 968 aa10.07□□□□□ -0.8
BEST3-212ENST00000553096 PLCH2O75038 1416 aa10.07□□□□□ -0.8
BEST3-212ENST00000553096 NUP155O75694 1391 aa10.06□□□□□ -0.8
BEST3-212ENST00000553096 MAGI2Q86UL8 1455 aa10.06□□□□□ -0.8
BEST3-212ENST00000553096 C11orf95C9JLR9 678 aaPredicted RBP10.05□□□□□ -0.8
BEST3-212ENST00000553096 HNRNPUQ00839 825 aaKnown RBP eCLIP10.05□□□□□ -0.8
BEST3-212ENST00000553096 PLEKHH2Q8IVE3 1493 aa10.05□□□□□ -0.8
BEST3-212ENST00000553096 ARAP3Q8WWN8 1544 aa10.04□□□□□ -0.8
BEST3-212ENST00000553096 TSPY4P0CV99 314 aa10.04□□□□□ -0.8
BEST3-212ENST00000553096 TSPY10P0CW01 314 aa10.04□□□□□ -0.8
BEST3-212ENST00000553096 ZFYVE16Q7Z3T8 1539 aa10.04□□□□□ -0.8
BEST3-212ENST00000553096 PPP4R2Q9NY27 417 aa10.04□□□□□ -0.8
BEST3-212ENST00000553096 DUOX2Q9NRD8 1548 aa10.04□□□□□ -0.8
BEST3-212ENST00000553096 ASXL2Q76L83 1435 aa10.04□□□□□ -0.8
BEST3-212ENST00000553096 TRAPPC8Q9Y2L5 1435 aa10.04□□□□□ -0.8
BEST3-212ENST00000553096 WDR7Q9Y4E6 1490 aa10.03□□□□□ -0.8
BEST3-212ENST00000553096 INO80Q9ULG1 1556 aaPredicted RBP10.03□□□□□ -0.8
BEST3-212ENST00000553096 TRPM1Q7Z4N2 1603 aa10.03□□□□□ -0.8
BEST3-212ENST00000553096 MSH5O43196 834 aa10.03□□□□□ -0.8
BEST3-212ENST00000553096 DEPDC5O75140 1603 aa10.02□□□□□ -0.8
BEST3-212ENST00000553096 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.8
BEST3-212ENST00000553096 PLA2R1Q13018 1463 aa10.02□□□□□ -0.8
BEST3-212ENST00000553096 E9PCH4 1651 aa10.02□□□□□ -0.81
BEST3-212ENST00000553096 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
BEST3-212ENST00000553096 CNTLNQ9NXG0 1405 aa10.01□□□□□ -0.81
BEST3-212ENST00000553096 RALGAPBQ86X10 1494 aa10.01□□□□□ -0.81
BEST3-212ENST00000553096 CCDC7Q96M83 1385 aa10.01□□□□□ -0.81
BEST3-212ENST00000553096 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
BEST3-212ENST00000553096 ERBINQ96RT1 1412 aa10□□□□□ -0.81
BEST3-212ENST00000553096 BCL11BQ9C0K0 894 aaPredicted RBP10□□□□□ -0.81
BEST3-212ENST00000553096 KIF13AQ9H1H9 1805 aa9.99□□□□□ -0.81
BEST3-212ENST00000553096 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
BEST3-212ENST00000553096 DIP2BQ9P265 1576 aa9.99□□□□□ -0.81
BEST3-212ENST00000553096 CEP152O94986 1710 aa9.98□□□□□ -0.81
BEST3-212ENST00000553096 SPHKAPQ2M3C7 1700 aa9.98□□□□□ -0.81
BEST3-212ENST00000553096 MROH1Q8NDA8 1641 aa9.97□□□□□ -0.81
BEST3-212ENST00000553096 KIDINS220Q9ULH0 1771 aa9.97□□□□□ -0.81
BEST3-212ENST00000553096 ATP7AQ04656 1500 aa9.97□□□□□ -0.81
BEST3-212ENST00000553096 KIF7Q2M1P5 1343 aa9.97□□□□□ -0.81
BEST3-212ENST00000553096 FGD1P98174 961 aa9.97□□□□□ -0.81
BEST3-212ENST00000553096 FANCAO15360 1455 aa9.97□□□□□ -0.81
BEST3-212ENST00000553096 ZBED9Q6R2W3 1325 aa9.97□□□□□ -0.81
BEST3-212ENST00000553096 USP47Q96K76 1375 aa9.96□□□□□ -0.81
BEST3-212ENST00000553096 A2MP01023 1474 aa9.96□□□□□ -0.81
BEST3-212ENST00000553096 TSPOAP1O95153 1857 aa9.96□□□□□ -0.81
BEST3-212ENST00000553096 TULP1O00294 542 aaPredicted RBP9.96□□□□□ -0.81
BEST3-212ENST00000553096 RNF17Q9BXT8 1623 aaKnown RBP9.96□□□□□ -0.82
BEST3-212ENST00000553096 VWDEQ8N2E2 1590 aa9.95□□□□□ -0.82
BEST3-212ENST00000553096 LAMC1P11047 1609 aa9.95□□□□□ -0.82
BEST3-212ENST00000553096 EFCAB2Q5VUJ9 269 aa9.95□□□□□ -0.82
BEST3-212ENST00000553096 ATP10AO60312 1499 aa9.95□□□□□ -0.82
BEST3-212ENST00000553096 TET3O43151 1660 aa9.95□□□□□ -0.82
BEST3-212ENST00000553096 EIF2AK4Q9P2K8 1649 aaKnown RBP9.95□□□□□ -0.82
BEST3-212ENST00000553096 RTEL1-TNFRSF6BF6WH68 1400 aa9.95□□□□□ -0.82
BEST3-212ENST00000553096 ZNF326Q5BKZ1 582 aaKnown RBP9.94□□□□□ -0.82
BEST3-212ENST00000553096 CLTCL1P53675 1640 aa9.94□□□□□ -0.82
BEST3-212ENST00000553096 PRAG1Q86YV5 1406 aa9.94□□□□□ -0.82
BEST3-212ENST00000553096 A0A0U1RQG5 324 aaPredicted RBP9.93□□□□□ -0.82
BEST3-212ENST00000553096 IRX6P78412 446 aaPredicted RBP9.93□□□□□ -0.82
BEST3-212ENST00000553096 CCDC144AA2RUR9 1427 aa9.93□□□□□ -0.82
BEST3-212ENST00000553096 AFAP1Q8N556 730 aa9.93□□□□□ -0.82
BEST3-212ENST00000553096 PRKRIP1Q9H875 184 aaPredicted RBP9.93□□□□□ -0.82
BEST3-212ENST00000553096 ADGRL1O94910 1474 aa9.93□□□□□ -0.82
BEST3-212ENST00000553096 CCDC184Q52MB2 194 aa9.93□□□□□ -0.82
BEST3-212ENST00000553096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.93□□□□□ -0.82
BEST3-212ENST00000553096 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
BEST3-212ENST00000553096 TRPM2O94759 1503 aa9.92□□□□□ -0.82
BEST3-212ENST00000553096 DHX29Q7Z478 1369 aaKnown RBP9.92□□□□□ -0.82
BEST3-212ENST00000553096 MADDQ8WXG6 1647 aa9.92□□□□□ -0.82
BEST3-212ENST00000553096 DCAF11Q8TEB1 546 aa9.91□□□□□ -0.82
BEST3-212ENST00000553096 MRS2Q9HD23 443 aa9.91□□□□□ -0.82
BEST3-212ENST00000553096 CFAP74Q9C0B2 1584 aa9.91□□□□□ -0.82
BEST3-212ENST00000553096 MROH2AA6NES4 1674 aa9.9□□□□□ -0.82
BEST3-212ENST00000553096 KDM2AQ9Y2K7 1162 aa9.9□□□□□ -0.82
BEST3-212ENST00000553096 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.82
BEST3-212ENST00000553096 IQGAP1P46940 1657 aa9.9□□□□□ -0.82
BEST3-212ENST00000553096 PPRC1Q5VV67 1664 aaKnown RBP9.9□□□□□ -0.82
BEST3-212ENST00000553096 IFT172Q9UG01 1749 aa9.9□□□□□ -0.82
BEST3-212ENST00000553096 CD109Q6YHK3 1445 aa9.89□□□□□ -0.83
BEST3-212ENST00000553096 SCAPERQ9BY12 1400 aa9.89□□□□□ -0.83
BEST3-212ENST00000553096 FRMPD1Q5SYB0 1578 aa9.89□□□□□ -0.83
BEST3-212ENST00000553096 SMG6Q86US8 1419 aaKnown RBP9.89□□□□□ -0.83
BEST3-212ENST00000553096 GLI2P10070 1586 aa9.89□□□□□ -0.83
BEST3-212ENST00000553096 NOP58Q9Y2X3 529 aaKnown RBP9.89□□□□□ -0.83
BEST3-212ENST00000553096 ABCA6Q8N139 1617 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms