RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 WASHC2CQ9Y4E1 1318 aa16.64■□□□□ 0.25
DDX23-217ENST00000553065 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
DDX23-217ENST00000553065 LTBP4Q8N2S1 1624 aa16.63■□□□□ 0.25
DDX23-217ENST00000553065 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
DDX23-217ENST00000553065 MYO3AQ8NEV4 1616 aa16.6■□□□□ 0.25
DDX23-217ENST00000553065 PZPP20742 1482 aa16.6■□□□□ 0.25
DDX23-217ENST00000553065 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
DDX23-217ENST00000553065 TNRQ92752 1358 aa16.59■□□□□ 0.25
DDX23-217ENST00000553065 PKD2Q13563 968 aa16.58■□□□□ 0.24
DDX23-217ENST00000553065 RRP7BPQ9NSQ0 103 aa16.58■□□□□ 0.24
DDX23-217ENST00000553065 A2ML1A8K2U0 1454 aa16.58■□□□□ 0.24
DDX23-217ENST00000553065 KDM5DQ9BY66 1539 aa16.58■□□□□ 0.24
DDX23-217ENST00000553065 DNMT1P26358 1616 aaKnown RBP16.58■□□□□ 0.24
DDX23-217ENST00000553065 MROH1Q8NDA8 1641 aa16.58■□□□□ 0.24
DDX23-217ENST00000553065 ZNF142P52746 1687 aaPredicted RBP16.58■□□□□ 0.24
DDX23-217ENST00000553065 PLA2R1Q13018 1463 aa16.57■□□□□ 0.24
DDX23-217ENST00000553065 ZNF335Q9H4Z2 1342 aaPredicted RBP16.57■□□□□ 0.24
DDX23-217ENST00000553065 APLP2Q06481 763 aa16.57■□□□□ 0.24
DDX23-217ENST00000553065 FGD6Q6ZV73 1430 aa16.56■□□□□ 0.24
DDX23-217ENST00000553065 PTPN23Q9H3S7 1636 aa16.56■□□□□ 0.24
DDX23-217ENST00000553065 ABCC3O15438 1527 aa16.55■□□□□ 0.24
DDX23-217ENST00000553065 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
DDX23-217ENST00000553065 RNF17Q9BXT8 1623 aaKnown RBP16.55■□□□□ 0.24
DDX23-217ENST00000553065 DAPK1P53355 1430 aa16.54■□□□□ 0.24
DDX23-217ENST00000553065 FAM135AQ9P2D6 1515 aa16.54■□□□□ 0.24
DDX23-217ENST00000553065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.52■□□□□ 0.24
DDX23-217ENST00000553065 KIF15Q9NS87 1388 aa16.52■□□□□ 0.24
DDX23-217ENST00000553065 DUOX2Q9NRD8 1548 aa16.52■□□□□ 0.24
DDX23-217ENST00000553065 SHANK2Q9UPX8 1470 aa16.5■□□□□ 0.23
DDX23-217ENST00000553065 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
DDX23-217ENST00000553065 EIF2AK4Q9P2K8 1649 aaKnown RBP16.49■□□□□ 0.23
DDX23-217ENST00000553065 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
DDX23-217ENST00000553065 SPATA31D1Q6ZQQ2 1576 aa16.48■□□□□ 0.23
DDX23-217ENST00000553065 ERVK-7P63135 1459 aa16.48■□□□□ 0.23
DDX23-217ENST00000553065 CROCC2H7BZ55 1655 aa16.47■□□□□ 0.23
DDX23-217ENST00000553065 ANKLE2Q86XL3 938 aa16.47■□□□□ 0.23
DDX23-217ENST00000553065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.232e-7■■■□□ 18.8
DDX23-217ENST00000553065 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
DDX23-217ENST00000553065 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
DDX23-217ENST00000553065 CFAP65Q6ZU64 1925 aaKnown RBP16.46■□□□□ 0.23
DDX23-217ENST00000553065 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
DDX23-217ENST00000553065 CEP152O94986 1710 aa16.45■□□□□ 0.22
DDX23-217ENST00000553065 UGGT1Q9NYU2 1555 aa16.45■□□□□ 0.22
DDX23-217ENST00000553065 LTKP29376 864 aa16.44■□□□□ 0.22
DDX23-217ENST00000553065 FAM50AQ14320 339 aaKnown RBP16.44■□□□□ 0.22
DDX23-217ENST00000553065 MED14O60244 1454 aa16.43■□□□□ 0.22
DDX23-217ENST00000553065 IQSEC2Q5JU85 1478 aa16.43■□□□□ 0.22
DDX23-217ENST00000553065 ANKRD30AQ9BXX3 1397 aa16.43■□□□□ 0.22
DDX23-217ENST00000553065 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
DDX23-217ENST00000553065 PRDM15P57071 1507 aaPredicted RBP16.43■□□□□ 0.22
DDX23-217ENST00000553065 ZC3H13Q5T200 1668 aaKnown RBP16.42■□□□□ 0.22
DDX23-217ENST00000553065 VWDEQ8N2E2 1590 aa16.42■□□□□ 0.22
DDX23-217ENST00000553065 ADGRL2O95490 1459 aa16.42■□□□□ 0.22
DDX23-217ENST00000553065 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
DDX23-217ENST00000553065 IDI1Q13907 227 aa16.41■□□□□ 0.22
DDX23-217ENST00000553065 NPHP4O75161 1426 aaPredicted RBP16.4■□□□□ 0.22
DDX23-217ENST00000553065 UBAP1LF5GYI3 381 aa16.38■□□□□ 0.21
DDX23-217ENST00000553065 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
DDX23-217ENST00000553065 LMTK2Q8IWU2 1503 aa16.38■□□□□ 0.21
DDX23-217ENST00000553065 ARHGAP23Q9P227 1491 aa16.37■□□□□ 0.21
DDX23-217ENST00000553065 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
DDX23-217ENST00000553065 NOS1P29475 1434 aa16.36■□□□□ 0.21
DDX23-217ENST00000553065 TXNDC2Q86VQ3 553 aa16.35■□□□□ 0.21
DDX23-217ENST00000553065 ANKRD50Q9ULJ7 1429 aa16.35■□□□□ 0.21
DDX23-217ENST00000553065 STRCP1A6NGW2 1772 aa16.34■□□□□ 0.21
DDX23-217ENST00000553065 KANK1Q14678 1352 aa16.33■□□□□ 0.2
DDX23-217ENST00000553065 SLIT1O75093 1534 aa16.33■□□□□ 0.2
DDX23-217ENST00000553065 ALKQ9UM73 1620 aa16.33■□□□□ 0.2
DDX23-217ENST00000553065 SYNMO15061 1565 aa16.32■□□□□ 0.2
DDX23-217ENST00000553065 ILDR2Q71H61 639 aa16.32■□□□□ 0.2
DDX23-217ENST00000553065 PIK3C2BO00750 1634 aa16.31■□□□□ 0.2
DDX23-217ENST00000553065 TMEM2Q9UHN6 1383 aa16.31■□□□□ 0.2
DDX23-217ENST00000553065 CPS1P31327 1500 aa16.3■□□□□ 0.2
DDX23-217ENST00000553065 SCAF11Q99590 1463 aaKnown RBP16.3■□□□□ 0.2
DDX23-217ENST00000553065 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
DDX23-217ENST00000553065 EFCAB6Q5THR3 1501 aa16.29■□□□□ 0.2
DDX23-217ENST00000553065 LRRC7Q96NW7 1537 aa16.29■□□□□ 0.2
DDX23-217ENST00000553065 ROCK1Q13464 1354 aa16.28■□□□□ 0.2
DDX23-217ENST00000553065 HSPA1LP34931 641 aa16.27■□□□□ 0.2
DDX23-217ENST00000553065 ITGAEP38570 1179 aa16.27■□□□□ 0.2
DDX23-217ENST00000553065 SLC52A1Q9NWF4 448 aa16.27■□□□□ 0.2
DDX23-217ENST00000553065 PIP4K2BP78356 416 aa16.26■□□□□ 0.19
DDX23-217ENST00000553065 TET3O43151 1660 aa16.25■□□□□ 0.19
DDX23-217ENST00000553065 TOM1O60784 492 aa16.24■□□□□ 0.19
DDX23-217ENST00000553065 SLC26A8Q96RN1 970 aa16.24■□□□□ 0.19
DDX23-217ENST00000553065 EID1Q9Y6B2 187 aa16.24■□□□□ 0.19
DDX23-217ENST00000553065 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
DDX23-217ENST00000553065 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
DDX23-217ENST00000553065 RPRD2Q5VT52 1461 aaKnown RBP16.22■□□□□ 0.19
DDX23-217ENST00000553065 UNC13BO14795 1591 aa16.21■□□□□ 0.19
DDX23-217ENST00000553065 KDM5AP29375 1690 aaKnown RBP16.21■□□□□ 0.18
DDX23-217ENST00000553065 ZFYVE9O95405 1425 aa16.2■□□□□ 0.18
DDX23-217ENST00000553065 RBM33Q96EV2 1170 aaKnown RBP16.2■□□□□ 0.18
DDX23-217ENST00000553065 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
DDX23-217ENST00000553065 NUP155O75694 1391 aa16.2■□□□□ 0.18
DDX23-217ENST00000553065 KCNA6P17658 529 aa16.19■□□□□ 0.18
DDX23-217ENST00000553065 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
DDX23-217ENST00000553065 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
DDX23-217ENST00000553065 ADGRB3O60242 1522 aa16.18■□□□□ 0.18
DDX23-217ENST00000553065 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms