RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
ATF1-204ENST00000552487 CAMSAP1Q5T5Y3 1602 aa17.19■□□□□ 0.34
ATF1-204ENST00000552487 NCKAP5LQ9HCH0 1330 aa17.17■□□□□ 0.34
ATF1-204ENST00000552487 CEP170BQ9Y4F5 1589 aaPredicted RBP17.15■□□□□ 0.34
ATF1-204ENST00000552487 MYO3AQ8NEV4 1616 aa17.15■□□□□ 0.34
ATF1-204ENST00000552487 A2ML1A8K2U0 1454 aa17.15■□□□□ 0.34
ATF1-204ENST00000552487 PZPP20742 1482 aa17.15■□□□□ 0.34
ATF1-204ENST00000552487 PLA2R1Q13018 1463 aa17.15■□□□□ 0.34
ATF1-204ENST00000552487 THEMISQ8N1K5 641 aaPredicted RBP17.14■□□□□ 0.33
ATF1-204ENST00000552487 KANK1Q14678 1352 aa17.13■□□□□ 0.33
ATF1-204ENST00000552487 KIF15Q9NS87 1388 aa17.13■□□□□ 0.33
ATF1-204ENST00000552487 STRCQ7RTU9 1775 aa17.12■□□□□ 0.33
ATF1-204ENST00000552487 FBXO31Q5XUX0 539 aaPredicted RBP17.12■□□□□ 0.33
ATF1-204ENST00000552487 ANKLE2Q86XL3 938 aa17.12■□□□□ 0.33
ATF1-204ENST00000552487 RRP7BPQ9NSQ0 103 aa17.12■□□□□ 0.33
ATF1-204ENST00000552487 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
ATF1-204ENST00000552487 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
ATF1-204ENST00000552487 FAM50AQ14320 339 aaKnown RBP17.1■□□□□ 0.33
ATF1-204ENST00000552487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
ATF1-204ENST00000552487 ANKRD30AQ9BXX3 1397 aa17.1■□□□□ 0.33
ATF1-204ENST00000552487 NLRP1Q9C000 1473 aa17.1■□□□□ 0.33
ATF1-204ENST00000552487 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
ATF1-204ENST00000552487 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
ATF1-204ENST00000552487 SHANK2Q9UPX8 1470 aa17.09■□□□□ 0.33
ATF1-204ENST00000552487 PTPN23Q9H3S7 1636 aa17.08■□□□□ 0.32
ATF1-204ENST00000552487 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
ATF1-204ENST00000552487 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
ATF1-204ENST00000552487 ERBINQ96RT1 1412 aa17.06■□□□□ 0.32
ATF1-204ENST00000552487 CHIC2Q9UKJ5 165 aa17.06■□□□□ 0.32
ATF1-204ENST00000552487 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
ATF1-204ENST00000552487 IQSEC2Q5JU85 1478 aa17.05■□□□□ 0.32
ATF1-204ENST00000552487 DAPK1P53355 1430 aa17.05■□□□□ 0.32
ATF1-204ENST00000552487 ZNF335Q9H4Z2 1342 aaPredicted RBP17.05■□□□□ 0.32
ATF1-204ENST00000552487 ABCC5O15440 1437 aa17.04■□□□□ 0.32
ATF1-204ENST00000552487 ZC3H13Q5T200 1668 aaKnown RBP17.04■□□□□ 0.32
ATF1-204ENST00000552487 RNF17Q9BXT8 1623 aaKnown RBP17.04■□□□□ 0.32
ATF1-204ENST00000552487 UBAP1LF5GYI3 381 aa17.04■□□□□ 0.32
ATF1-204ENST00000552487 ABCC3O15438 1527 aa17.04■□□□□ 0.32
ATF1-204ENST00000552487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.03■□□□□ 0.32
ATF1-204ENST00000552487 UGGT1Q9NYU2 1555 aa17.03■□□□□ 0.32
ATF1-204ENST00000552487 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
ATF1-204ENST00000552487 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.31
ATF1-204ENST00000552487 EID1Q9Y6B2 187 aa17.01■□□□□ 0.31
ATF1-204ENST00000552487 ERVK-7P63135 1459 aa16.99■□□□□ 0.31
ATF1-204ENST00000552487 LTBP4Q8N2S1 1624 aa16.98■□□□□ 0.31
ATF1-204ENST00000552487 NPHP4O75161 1426 aaPredicted RBP16.97■□□□□ 0.31
ATF1-204ENST00000552487 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
ATF1-204ENST00000552487 TOM1O60784 492 aa16.96■□□□□ 0.31
ATF1-204ENST00000552487 SPATA31D1Q6ZQQ2 1576 aa16.95■□□□□ 0.3
ATF1-204ENST00000552487 CPS1P31327 1500 aa16.95■□□□□ 0.3
ATF1-204ENST00000552487 PRDM15P57071 1507 aaPredicted RBP16.95■□□□□ 0.3
ATF1-204ENST00000552487 ARHGAP31Q2M1Z3 1444 aa16.95■□□□□ 0.3
ATF1-204ENST00000552487 DISP3Q9P2K9 1392 aa16.94■□□□□ 0.3
ATF1-204ENST00000552487 POLR1AO95602 1720 aaPredicted RBP16.93■□□□□ 0.3
ATF1-204ENST00000552487 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
ATF1-204ENST00000552487 BCANQ96GW7 911 aa16.92■□□□□ 0.3
ATF1-204ENST00000552487 CEP152O94986 1710 aa16.91■□□□□ 0.3
ATF1-204ENST00000552487 ANKRD50Q9ULJ7 1429 aa16.91■□□□□ 0.3
ATF1-204ENST00000552487 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
ATF1-204ENST00000552487 MROH1Q8NDA8 1641 aa16.9■□□□□ 0.3
ATF1-204ENST00000552487 SCAF11Q99590 1463 aaKnown RBP16.9■□□□□ 0.3
ATF1-204ENST00000552487 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
ATF1-204ENST00000552487 MED14O60244 1454 aa16.89■□□□□ 0.29
ATF1-204ENST00000552487 ADGRL2O95490 1459 aa16.89■□□□□ 0.29
ATF1-204ENST00000552487 ITGAEP38570 1179 aa16.89■□□□□ 0.29
ATF1-204ENST00000552487 HDGFP51858 240 aaKnown RBP16.88■□□□□ 0.29
ATF1-204ENST00000552487 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
ATF1-204ENST00000552487 SLC52A1Q9NWF4 448 aa16.87■□□□□ 0.29
ATF1-204ENST00000552487 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
ATF1-204ENST00000552487 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
ATF1-204ENST00000552487 LMTK2Q8IWU2 1503 aa16.85■□□□□ 0.29
ATF1-204ENST00000552487 TMEM2Q9UHN6 1383 aa16.84■□□□□ 0.29
ATF1-204ENST00000552487 CHGAP10645 457 aaKnown RBP16.83■□□□□ 0.28
ATF1-204ENST00000552487 IDI1Q13907 227 aa16.83■□□□□ 0.28
ATF1-204ENST00000552487 PPARGC1BQ86YN6 1023 aaKnown RBP16.83■□□□□ 0.28
ATF1-204ENST00000552487 EFCAB6Q5THR3 1501 aa16.82■□□□□ 0.28
ATF1-204ENST00000552487 ROCK1Q13464 1354 aa16.82■□□□□ 0.28
ATF1-204ENST00000552487 CFAP65Q6ZU64 1925 aaKnown RBP16.82■□□□□ 0.28
ATF1-204ENST00000552487 RPRD2Q5VT52 1461 aaKnown RBP16.81■□□□□ 0.28
ATF1-204ENST00000552487 SLIT1O75093 1534 aa16.8■□□□□ 0.28
ATF1-204ENST00000552487 UBR1Q8IWV7 1749 aa16.8■□□□□ 0.28
ATF1-204ENST00000552487 LTKP29376 864 aa16.8■□□□□ 0.28
ATF1-204ENST00000552487 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
ATF1-204ENST00000552487 VWDEQ8N2E2 1590 aa16.79■□□□□ 0.28
ATF1-204ENST00000552487 ARHGAP23Q9P227 1491 aa16.79■□□□□ 0.28
ATF1-204ENST00000552487 NUP155O75694 1391 aa16.77■□□□□ 0.28
ATF1-204ENST00000552487 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.77■□□□□ 0.28
ATF1-204ENST00000552487 NOS1P29475 1434 aa16.77■□□□□ 0.27
ATF1-204ENST00000552487 PIK3C2BO00750 1634 aa16.77■□□□□ 0.27
ATF1-204ENST00000552487 SYNMO15061 1565 aa16.77■□□□□ 0.27
ATF1-204ENST00000552487 HSPA1LP34931 641 aa16.76■□□□□ 0.27
ATF1-204ENST00000552487 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
ATF1-204ENST00000552487 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
ATF1-204ENST00000552487 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
ATF1-204ENST00000552487 SLC26A8Q96RN1 970 aa16.74■□□□□ 0.27
ATF1-204ENST00000552487 LRRC7Q96NW7 1537 aa16.73■□□□□ 0.27
ATF1-204ENST00000552487 TET3O43151 1660 aa16.72■□□□□ 0.27
ATF1-204ENST00000552487 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
ATF1-204ENST00000552487 KCNA6P17658 529 aa16.72■□□□□ 0.27
ATF1-204ENST00000552487 C14orf37Q86TY3 774 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms