RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 PKD2Q13563 968 aa18.37■□□□□ 0.53
CACNB3-223ENST00000552480 FOXD1Q16676 465 aa18.37■□□□□ 0.53
CACNB3-223ENST00000552480 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
CACNB3-223ENST00000552480 TSPOAP1O95153 1857 aa18.36■□□□□ 0.53
CACNB3-223ENST00000552480 FRMPD1Q5SYB0 1578 aa18.36■□□□□ 0.53
CACNB3-223ENST00000552480 ABCA6Q8N139 1617 aa18.35■□□□□ 0.53
CACNB3-223ENST00000552480 RPRD2Q5VT52 1461 aaKnown RBP18.35■□□□□ 0.53
CACNB3-223ENST00000552480 A2MP01023 1474 aa18.34■□□□□ 0.53
CACNB3-223ENST00000552480 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.53
CACNB3-223ENST00000552480 BCORL1Q5H9F3 1711 aa18.32■□□□□ 0.52
CACNB3-223ENST00000552480 VWDEQ8N2E2 1590 aa18.32■□□□□ 0.52
CACNB3-223ENST00000552480 DIP2CQ9Y2E4 1556 aa18.32■□□□□ 0.52
CACNB3-223ENST00000552480 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-223ENST00000552480 RNF17Q9BXT8 1623 aaKnown RBP18.31■□□□□ 0.52
CACNB3-223ENST00000552480 RAPGEF3O95398 923 aa18.31■□□□□ 0.52
CACNB3-223ENST00000552480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
CACNB3-223ENST00000552480 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
CACNB3-223ENST00000552480 MROH1Q8NDA8 1641 aa18.3■□□□□ 0.52
CACNB3-223ENST00000552480 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
CACNB3-223ENST00000552480 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
CACNB3-223ENST00000552480 KANK1Q14678 1352 aa18.28■□□□□ 0.52
CACNB3-223ENST00000552480 TET3O43151 1660 aa18.28■□□□□ 0.52
CACNB3-223ENST00000552480 KIF3BO15066 747 aa18.26■□□□□ 0.51
CACNB3-223ENST00000552480 ATP10AO60312 1499 aa18.24■□□□□ 0.51
CACNB3-223ENST00000552480 E9PCH4 1651 aa18.24■□□□□ 0.51
CACNB3-223ENST00000552480 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
CACNB3-223ENST00000552480 YEATS2Q9ULM3 1422 aa18.23■□□□□ 0.51
CACNB3-223ENST00000552480 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
CACNB3-223ENST00000552480 REREQ9P2R6 1566 aa18.21■□□□□ 0.51
CACNB3-223ENST00000552480 PLA2R1Q13018 1463 aa18.2■□□□□ 0.5
CACNB3-223ENST00000552480 EFCAB6Q5THR3 1501 aa18.19■□□□□ 0.5
CACNB3-223ENST00000552480 CCDC144AA2RUR9 1427 aa18.19■□□□□ 0.5
CACNB3-223ENST00000552480 CEP152O94986 1710 aa18.18■□□□□ 0.5
CACNB3-223ENST00000552480 TRPM2O94759 1503 aa18.18■□□□□ 0.5
CACNB3-223ENST00000552480 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
CACNB3-223ENST00000552480 COL17A1Q9UMD9 1497 aaPredicted RBP18.17■□□□□ 0.5
CACNB3-223ENST00000552480 PTPRTO14522 1441 aa18.16■□□□□ 0.5
CACNB3-223ENST00000552480 ARHGEF40Q8TER5 1519 aa18.16■□□□□ 0.5
CACNB3-223ENST00000552480 ZC3H13Q5T200 1668 aaKnown RBP18.15■□□□□ 0.5
CACNB3-223ENST00000552480 ABCC3O15438 1527 aa18.14■□□□□ 0.49
CACNB3-223ENST00000552480 AGLP35573 1532 aa18.13■□□□□ 0.49
CACNB3-223ENST00000552480 CAMSAP1Q5T5Y3 1602 aa18.11■□□□□ 0.49
CACNB3-223ENST00000552480 CLTCL1P53675 1640 aa18.1■□□□□ 0.49
CACNB3-223ENST00000552480 UHRF1BP1Q6BDS2 1440 aa18.1■□□□□ 0.49
CACNB3-223ENST00000552480 GGT6Q6P531 493 aa18.1■□□□□ 0.49
CACNB3-223ENST00000552480 NBPF8Q3BBV2 869 aa18.07■□□□□ 0.48
CACNB3-223ENST00000552480 NEURL4Q96JN8 1562 aa18.07■□□□□ 0.48
CACNB3-223ENST00000552480 WASHC2CQ9Y4E1 1318 aa18.06■□□□□ 0.48
CACNB3-223ENST00000552480 NPATQ14207 1427 aa18.06■□□□□ 0.48
CACNB3-223ENST00000552480 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
CACNB3-223ENST00000552480 SIGLEC1Q9BZZ2 1709 aa18.05■□□□□ 0.48
CACNB3-223ENST00000552480 ARHGAP31Q2M1Z3 1444 aa18.05■□□□□ 0.48
CACNB3-223ENST00000552480 SPATA31E1Q6ZUB1 1445 aa18.05■□□□□ 0.48
CACNB3-223ENST00000552480 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
CACNB3-223ENST00000552480 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
CACNB3-223ENST00000552480 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
CACNB3-223ENST00000552480 DCAF11Q8TEB1 546 aa18.01■□□□□ 0.47
CACNB3-223ENST00000552480 KIF1BO60333 1816 aa18■□□□□ 0.47
CACNB3-223ENST00000552480 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
CACNB3-223ENST00000552480 NOS1P29475 1434 aa17.99■□□□□ 0.47
CACNB3-223ENST00000552480 PRAG1Q86YV5 1406 aa17.99■□□□□ 0.47
CACNB3-223ENST00000552480 EIF4G2P78344 907 aaKnown RBP eCLIP17.97■□□□□ 0.47
CACNB3-223ENST00000552480 RGL3Q3MIN7 710 aa17.97■□□□□ 0.47
CACNB3-223ENST00000552480 ZNF326Q5BKZ1 582 aaKnown RBP17.97■□□□□ 0.47
CACNB3-223ENST00000552480 TRPM1Q7Z4N2 1603 aa17.97■□□□□ 0.47
CACNB3-223ENST00000552480 ADGRB3O60242 1522 aa17.97■□□□□ 0.47
CACNB3-223ENST00000552480 SYNMO15061 1565 aa17.96■□□□□ 0.47
CACNB3-223ENST00000552480 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
CACNB3-223ENST00000552480 PIK3C2BO00750 1634 aa17.96■□□□□ 0.47
CACNB3-223ENST00000552480 MROH2AA6NES4 1674 aa17.96■□□□□ 0.47
CACNB3-223ENST00000552480 CLTCQ00610 1675 aaKnown RBP17.96■□□□□ 0.47
CACNB3-223ENST00000552480 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
CACNB3-223ENST00000552480 HSPA5P11021 654 aaKnown RBP17.95■□□□□ 0.46
CACNB3-223ENST00000552480 STAC3Q96MF2 364 aa17.95■□□□□ 0.46
CACNB3-223ENST00000552480 MADDQ8WXG6 1647 aa17.94■□□□□ 0.46
CACNB3-223ENST00000552480 LAMC1P11047 1609 aa17.93■□□□□ 0.46
CACNB3-223ENST00000552480 IFT172Q9UG01 1749 aa17.92■□□□□ 0.46
CACNB3-223ENST00000552480 MYOM2P54296 1465 aa17.91■□□□□ 0.46
CACNB3-223ENST00000552480 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
CACNB3-223ENST00000552480 ERVK-7P63135 1459 aa17.9■□□□□ 0.46
CACNB3-223ENST00000552480 CFAP65Q6ZU64 1925 aaKnown RBP17.89■□□□□ 0.45
CACNB3-223ENST00000552480 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
CACNB3-223ENST00000552480 GPRASP1Q5JY77 1395 aa17.89■□□□□ 0.45
CACNB3-223ENST00000552480 USP47Q96K76 1375 aa17.89■□□□□ 0.45
CACNB3-223ENST00000552480 SPATA31D1Q6ZQQ2 1576 aa17.87■□□□□ 0.45
CACNB3-223ENST00000552480 MLECQ14165 292 aa17.87■□□□□ 0.45
CACNB3-223ENST00000552480 CARD11Q9BXL7 1154 aa17.86■□□□□ 0.45
CACNB3-223ENST00000552480 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
CACNB3-223ENST00000552480 KIAA1210Q9ULL0 1709 aa17.86■□□□□ 0.45
CACNB3-223ENST00000552480 PPLO60437 1756 aa17.86■□□□□ 0.45
CACNB3-223ENST00000552480 POLR1AO95602 1720 aaPredicted RBP17.85■□□□□ 0.45
CACNB3-223ENST00000552480 ARID4BQ4LE39 1312 aaPredicted RBP17.85■□□□□ 0.45
CACNB3-223ENST00000552480 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
CACNB3-223ENST00000552480 RPGRIP1LQ68CZ1 1315 aa17.84■□□□□ 0.45
CACNB3-223ENST00000552480 ESF1Q9H501 851 aaKnown RBP17.83■□□□□ 0.44
CACNB3-223ENST00000552480 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
CACNB3-223ENST00000552480 TMEM131LA2VDJ0 1609 aa17.82■□□□□ 0.44
CACNB3-223ENST00000552480 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
CACNB3-223ENST00000552480 IDI1Q13907 227 aa17.8■□□□□ 0.44
CACNB3-223ENST00000552480 FBXO31Q5XUX0 539 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms