RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 TSPY4P0CV99 314 aa9.69□□□□□ -0.86
CCDC59-206ENST00000552412 TSPY10P0CW01 314 aa9.69□□□□□ -0.86
CCDC59-206ENST00000552412 TEX14Q8IWB6 1497 aa9.69□□□□□ -0.86
CCDC59-206ENST00000552412 CLEC11AQ9Y240 323 aa9.69□□□□□ -0.86
CCDC59-206ENST00000552412 ARHGAP5Q13017 1502 aa9.68□□□□□ -0.86
CCDC59-206ENST00000552412 KIF15Q9NS87 1388 aa9.67□□□□□ -0.86
CCDC59-206ENST00000552412 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
CCDC59-206ENST00000552412 PLCH2O75038 1416 aa9.66□□□□□ -0.86
CCDC59-206ENST00000552412 ZNF777Q9ULD5 760 aaPredicted RBP9.66□□□□□ -0.86
CCDC59-206ENST00000552412 UNC13BO14795 1591 aa9.66□□□□□ -0.86
CCDC59-206ENST00000552412 SYCP2Q9BX26 1530 aa9.66□□□□□ -0.86
CCDC59-206ENST00000552412 ARHGEF12Q9NZN5 1544 aa9.66□□□□□ -0.86
CCDC59-206ENST00000552412 SPDYE1Q8NFV5 336 aaPredicted RBP9.65□□□□□ -0.86
CCDC59-206ENST00000552412 ABCC1P33527 1531 aa9.64□□□□□ -0.87
CCDC59-206ENST00000552412 DUOX2Q9NRD8 1548 aa9.64□□□□□ -0.87
CCDC59-206ENST00000552412 POLR1AO95602 1720 aaPredicted RBP9.63□□□□□ -0.87
CCDC59-206ENST00000552412 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
CCDC59-206ENST00000552412 MAGI2Q86UL8 1455 aa9.63□□□□□ -0.87
CCDC59-206ENST00000552412 ERBINQ96RT1 1412 aa9.63□□□□□ -0.87
CCDC59-206ENST00000552412 WDR7Q9Y4E6 1490 aa9.62□□□□□ -0.87
CCDC59-206ENST00000552412 IQGAP3Q86VI3 1631 aa9.62□□□□□ -0.87
CCDC59-206ENST00000552412 RTEL1-TNFRSF6BF6WH68 1400 aa9.62□□□□□ -0.87
CCDC59-206ENST00000552412 UHRF1BP1Q6BDS2 1440 aa9.62□□□□□ -0.87
CCDC59-206ENST00000552412 ABCA9Q8IUA7 1624 aa9.61□□□□□ -0.87
CCDC59-206ENST00000552412 EIF4G2P78344 907 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC59-206ENST00000552412 EFCAB2Q5VUJ9 269 aa9.61□□□□□ -0.87
CCDC59-206ENST00000552412 L3MBTL2Q969R5 705 aa9.61□□□□□ -0.87
CCDC59-206ENST00000552412 NUP155O75694 1391 aa9.61□□□□□ -0.87
CCDC59-206ENST00000552412 FAM135AQ9P2D6 1515 aa9.61□□□□□ -0.87
CCDC59-206ENST00000552412 CCER2I3L3R5 266 aa9.6□□□□□ -0.87
CCDC59-206ENST00000552412 HNRNPMP52272 730 aaKnown RBP eCLIP9.6□□□□□ -0.87
CCDC59-206ENST00000552412 PKD2Q13563 968 aa9.59□□□□□ -0.87
CCDC59-206ENST00000552412 ATP10AO60312 1499 aa9.59□□□□□ -0.87
CCDC59-206ENST00000552412 RALGAPBQ86X10 1494 aa9.58□□□□□ -0.88
CCDC59-206ENST00000552412 SPATA31E1Q6ZUB1 1445 aa9.57□□□□□ -0.88
CCDC59-206ENST00000552412 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
CCDC59-206ENST00000552412 DDX10Q13206 875 aaKnown RBP9.57□□□□□ -0.88
CCDC59-206ENST00000552412 CFAP74Q9C0B2 1584 aa9.57□□□□□ -0.88
CCDC59-206ENST00000552412 ZFYVE16Q7Z3T8 1539 aa9.56□□□□□ -0.88
CCDC59-206ENST00000552412 ANP32CO43423 234 aa9.56□□□□□ -0.88
CCDC59-206ENST00000552412 HSPA5P11021 654 aaKnown RBP9.56□□□□□ -0.88
CCDC59-206ENST00000552412 ARID4BQ4LE39 1312 aaPredicted RBP9.56□□□□□ -0.88
CCDC59-206ENST00000552412 INO80Q9ULG1 1556 aaPredicted RBP9.55□□□□□ -0.88
CCDC59-206ENST00000552412 DEPDC5O75140 1603 aa9.55□□□□□ -0.88
CCDC59-206ENST00000552412 EIF2AK4Q9P2K8 1649 aaKnown RBP9.55□□□□□ -0.88
CCDC59-206ENST00000552412 SPDYE4A6NLX3 237 aa9.54□□□□□ -0.88
CCDC59-206ENST00000552412 YTHDC1Q96MU7 727 aaKnown RBP9.54□□□□□ -0.88
CCDC59-206ENST00000552412 CNTLNQ9NXG0 1405 aa9.54□□□□□ -0.88
CCDC59-206ENST00000552412 FANCAO15360 1455 aa9.53□□□□□ -0.88
CCDC59-206ENST00000552412 LAMC1P11047 1609 aa9.53□□□□□ -0.88
CCDC59-206ENST00000552412 CCDC144AA2RUR9 1427 aa9.53□□□□□ -0.88
CCDC59-206ENST00000552412 ASXL2Q76L83 1435 aa9.53□□□□□ -0.88
CCDC59-206ENST00000552412 KDM5CP41229 1560 aa9.53□□□□□ -0.88
CCDC59-206ENST00000552412 WASHC2AQ641Q2 1341 aa9.53□□□□□ -0.88
CCDC59-206ENST00000552412 CCDC7Q96M83 1385 aa9.52□□□□□ -0.88
CCDC59-206ENST00000552412 PRR29P0C7W0 189 aa9.52□□□□□ -0.89
CCDC59-206ENST00000552412 NBPF8Q3BBV2 869 aa9.52□□□□□ -0.89
CCDC59-206ENST00000552412 NEURL4Q96JN8 1562 aa9.52□□□□□ -0.89
CCDC59-206ENST00000552412 KCNH8Q96L42 1107 aa9.52□□□□□ -0.89
CCDC59-206ENST00000552412 TRAPPC8Q9Y2L5 1435 aa9.52□□□□□ -0.89
CCDC59-206ENST00000552412 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
CCDC59-206ENST00000552412 ATP7AQ04656 1500 aa9.51□□□□□ -0.89
CCDC59-206ENST00000552412 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
CCDC59-206ENST00000552412 SPAG9O60271 1321 aaKnown RBP9.51□□□□□ -0.89
CCDC59-206ENST00000552412 ROCK2O75116 1388 aaKnown RBP9.5□□□□□ -0.89
CCDC59-206ENST00000552412 VWDEQ8N2E2 1590 aa9.5□□□□□ -0.89
CCDC59-206ENST00000552412 ADGRL1O94910 1474 aa9.5□□□□□ -0.89
CCDC59-206ENST00000552412 TET3O43151 1660 aa9.5□□□□□ -0.89
CCDC59-206ENST00000552412 USP47Q96K76 1375 aa9.5□□□□□ -0.89
CCDC59-206ENST00000552412 PLA2R1Q13018 1463 aa9.49□□□□□ -0.89
CCDC59-206ENST00000552412 HAX1O00165 279 aa9.49□□□□□ -0.89
CCDC59-206ENST00000552412 STAC3Q96MF2 364 aa9.49□□□□□ -0.89
CCDC59-206ENST00000552412 TRPM2O94759 1503 aa9.49□□□□□ -0.89
CCDC59-206ENST00000552412 PRDM15P57071 1507 aaPredicted RBP9.49□□□□□ -0.89
CCDC59-206ENST00000552412 TRPM1Q7Z4N2 1603 aa9.49□□□□□ -0.89
CCDC59-206ENST00000552412 ZNF518AQ6AHZ1 1483 aa9.48□□□□□ -0.89
CCDC59-206ENST00000552412 HIRIP3Q9BW71 556 aaPredicted RBP9.48□□□□□ -0.89
CCDC59-206ENST00000552412 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
CCDC59-206ENST00000552412 BCORL1Q5H9F3 1711 aa9.48□□□□□ -0.89
CCDC59-206ENST00000552412 PRAG1Q86YV5 1406 aa9.48□□□□□ -0.89
CCDC59-206ENST00000552412 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
CCDC59-206ENST00000552412 SPHKAPQ2M3C7 1700 aa9.47□□□□□ -0.89
CCDC59-206ENST00000552412 KANK1Q14678 1352 aa9.47□□□□□ -0.89
CCDC59-206ENST00000552412 PTPRTO14522 1441 aa9.47□□□□□ -0.89
CCDC59-206ENST00000552412 LMTK2Q8IWU2 1503 aa9.46□□□□□ -0.89
CCDC59-206ENST00000552412 RNF17Q9BXT8 1623 aaKnown RBP9.46□□□□□ -0.89
CCDC59-206ENST00000552412 E9PCH4 1651 aa9.46□□□□□ -0.89
CCDC59-206ENST00000552412 CEP152O94986 1710 aa9.46□□□□□ -0.89
CCDC59-206ENST00000552412 DHX29Q7Z478 1369 aaKnown RBP9.46□□□□□ -0.9
CCDC59-206ENST00000552412 SCAPERQ9BY12 1400 aa9.46□□□□□ -0.9
CCDC59-206ENST00000552412 A2MP01023 1474 aa9.46□□□□□ -0.9
CCDC59-206ENST00000552412 NEO1Q92859 1461 aa9.46□□□□□ -0.9
CCDC59-206ENST00000552412 KIDINS220Q9ULH0 1771 aa9.45□□□□□ -0.9
CCDC59-206ENST00000552412 KIF7Q2M1P5 1343 aa9.45□□□□□ -0.9
CCDC59-206ENST00000552412 MLH3Q9UHC1 1453 aa9.45□□□□□ -0.9
CCDC59-206ENST00000552412 CHADLQ6NUI6 762 aa9.44□□□□□ -0.9
CCDC59-206ENST00000552412 POGZQ7Z3K3 1410 aa9.44□□□□□ -0.9
CCDC59-206ENST00000552412 MROH1Q8NDA8 1641 aa9.44□□□□□ -0.9
CCDC59-206ENST00000552412 HECW2Q9P2P5 1572 aa9.43□□□□□ -0.9
CCDC59-206ENST00000552412 CD109Q6YHK3 1445 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms