RNA–Protein interactions for RNA: ENST00000552275.1

ATP2B1-210, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-210ENST00000552275 PHF14O94880 888 aa11.79□□□□□ -0.52
ATP2B1-210ENST00000552275 EPAS1Q99814 870 aa11.79□□□□□ -0.52
ATP2B1-210ENST00000552275 EN1Q05925 392 aaPredicted RBP11.78□□□□□ -0.52
ATP2B1-210ENST00000552275 AMHR2Q16671 573 aa11.78□□□□□ -0.52
ATP2B1-210ENST00000552275 DOK7Q18PE1 504 aa11.78□□□□□ -0.52
ATP2B1-210ENST00000552275 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
ATP2B1-210ENST00000552275 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
ATP2B1-210ENST00000552275 C14orf37Q86TY3 774 aa11.76□□□□□ -0.53
ATP2B1-210ENST00000552275 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
ATP2B1-210ENST00000552275 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
ATP2B1-210ENST00000552275 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
ATP2B1-210ENST00000552275 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
ATP2B1-210ENST00000552275 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
ATP2B1-210ENST00000552275 CDHR5Q9HBB8 845 aa11.74□□□□□ -0.53
ATP2B1-210ENST00000552275 MAP3K7O43318 606 aa11.73□□□□□ -0.53
ATP2B1-210ENST00000552275 PARP9Q8IXQ6 854 aa11.73□□□□□ -0.53
ATP2B1-210ENST00000552275 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
ATP2B1-210ENST00000552275 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
ATP2B1-210ENST00000552275 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
ATP2B1-210ENST00000552275 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
ATP2B1-210ENST00000552275 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
ATP2B1-210ENST00000552275 SPNS2Q8IVW8 549 aa11.7□□□□□ -0.54
ATP2B1-210ENST00000552275 FBXW7Q969H0 707 aa11.7□□□□□ -0.54
ATP2B1-210ENST00000552275 RBM33Q96EV2 1170 aaKnown RBP11.7□□□□□ -0.54
ATP2B1-210ENST00000552275 FAM117AQ9C073 453 aa11.7□□□□□ -0.54
ATP2B1-210ENST00000552275 ERBB3P21860 1342 aa11.68□□□□□ -0.54
ATP2B1-210ENST00000552275 TSR1Q2NL82 804 aaKnown RBP11.68□□□□□ -0.54
ATP2B1-210ENST00000552275 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
ATP2B1-210ENST00000552275 FOSBP53539 338 aa11.66□□□□□ -0.54
ATP2B1-210ENST00000552275 TTLL12Q14166 644 aaPredicted RBP11.66□□□□□ -0.54
ATP2B1-210ENST00000552275 MMRN1Q13201 1228 aa11.65□□□□□ -0.54
ATP2B1-210ENST00000552275 PLEKHG3A1L390 1219 aa11.64□□□□□ -0.55
ATP2B1-210ENST00000552275 KRTAP3-3Q9BYR6 98 aa11.63□□□□□ -0.55
ATP2B1-210ENST00000552275 KRTAP3-2Q9BYR7 98 aa11.63□□□□□ -0.55
ATP2B1-210ENST00000552275 GIGYF2Q6Y7W6 1299 aaKnown RBP11.62□□□□□ -0.55
ATP2B1-210ENST00000552275 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
ATP2B1-210ENST00000552275 ZDHHC16Q969W1 377 aa11.61□□□□□ -0.55
ATP2B1-210ENST00000552275 NUDT7P0C024 238 aa11.6□□□□□ -0.55
ATP2B1-210ENST00000552275 ARSIQ5FYB1 569 aa11.6□□□□□ -0.55
ATP2B1-210ENST00000552275 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
ATP2B1-210ENST00000552275 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
ATP2B1-210ENST00000552275 ZNF454Q8N9F8 522 aa11.6□□□□□ -0.55
ATP2B1-210ENST00000552275 CERKQ8TCT0 537 aa11.6□□□□□ -0.55
ATP2B1-210ENST00000552275 C6orf132Q5T0Z8 1188 aa11.59□□□□□ -0.55
ATP2B1-210ENST00000552275 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.55
ATP2B1-210ENST00000552275 TMUB1Q9BVT8 246 aa11.58□□□□□ -0.56
ATP2B1-210ENST00000552275 REPIN1Q9BWE0 567 aaKnown RBP11.58□□□□□ -0.56
ATP2B1-210ENST00000552275 MS4A1P11836 297 aa11.57□□□□□ -0.56
ATP2B1-210ENST00000552275 CLCN1P35523 988 aa11.57□□□□□ -0.56
ATP2B1-210ENST00000552275 PHOX2BQ99453 314 aa11.57□□□□□ -0.56
ATP2B1-210ENST00000552275 PADI6Q6TGC4 694 aa11.56□□□□□ -0.56
ATP2B1-210ENST00000552275 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
ATP2B1-210ENST00000552275 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
ATP2B1-210ENST00000552275 GPCPD1Q9NPB8 672 aa11.55□□□□□ -0.56
ATP2B1-210ENST00000552275 OATP04181 439 aa11.54□□□□□ -0.56
ATP2B1-210ENST00000552275 MDM2Q00987 491 aaPredicted RBP11.54□□□□□ -0.56
ATP2B1-210ENST00000552275 METTL3Q86U44 580 aaKnown RBP11.54□□□□□ -0.56
ATP2B1-210ENST00000552275 TTC13Q8NBP0 860 aa11.54□□□□□ -0.56
ATP2B1-210ENST00000552275 GOPCQ9HD26 462 aa11.54□□□□□ -0.56
ATP2B1-210ENST00000552275 ADGRG1Q9Y653 693 aa11.53□□□□□ -0.56
ATP2B1-210ENST00000552275 FAM161AQ3B820 660 aa11.52□□□□□ -0.57
ATP2B1-210ENST00000552275 PXYLP1Q8TE99 480 aa11.51□□□□□ -0.57
ATP2B1-210ENST00000552275 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
ATP2B1-210ENST00000552275 PRSS12P56730 875 aa11.49□□□□□ -0.57
ATP2B1-210ENST00000552275 ZNF687Q8N1G0 1237 aa11.49□□□□□ -0.57
ATP2B1-210ENST00000552275 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
ATP2B1-210ENST00000552275 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
ATP2B1-210ENST00000552275 PPP4R3BQ5MIZ7 849 aa11.48□□□□□ -0.57
ATP2B1-210ENST00000552275 FAM217BQ9NTX9 383 aaPredicted RBP11.48□□□□□ -0.57
ATP2B1-210ENST00000552275 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
ATP2B1-210ENST00000552275 BCL2L12Q9HB09 334 aa11.46□□□□□ -0.57
ATP2B1-210ENST00000552275 SH3D19Q5HYK7 790 aa11.45□□□□□ -0.58
ATP2B1-210ENST00000552275 NLRP7Q8WX94 980 aa11.45□□□□□ -0.58
ATP2B1-210ENST00000552275 PCMTD1Q96MG8 357 aaPredicted RBP11.45□□□□□ -0.58
ATP2B1-210ENST00000552275 RBM46Q8TBY0 533 aaKnown RBP11.44□□□□□ -0.58
ATP2B1-210ENST00000552275 COL9A1P20849 921 aa11.43□□□□□ -0.58
ATP2B1-210ENST00000552275 BEGAINQ9BUH8 593 aa11.43□□□□□ -0.58
ATP2B1-210ENST00000552275 PPP1R3GB7ZBB8 358 aa11.42□□□□□ -0.58
ATP2B1-210ENST00000552275 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
ATP2B1-210ENST00000552275 FAM198AQ9UFP1 575 aa11.41□□□□□ -0.58
ATP2B1-210ENST00000552275 PTPREP23469 700 aa11.4□□□□□ -0.58
ATP2B1-210ENST00000552275 ZMYND15Q9H091 742 aa11.4□□□□□ -0.58
ATP2B1-210ENST00000552275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.39□□□□□ -0.59
ATP2B1-210ENST00000552275 SUPT5HO00267 1087 aaKnown RBP11.39□□□□□ -0.59
ATP2B1-210ENST00000552275 SKIV2LQ15477 1246 aaKnown RBP11.39□□□□□ -0.59
ATP2B1-210ENST00000552275 FLIIQ13045 1269 aa11.38□□□□□ -0.59
ATP2B1-210ENST00000552275 ANKRD13DQ6ZTN6 518 aa11.38□□□□□ -0.59
ATP2B1-210ENST00000552275 ARXQ96QS3 562 aa11.38□□□□□ -0.59
ATP2B1-210ENST00000552275 EYA1Q99502 592 aa11.38□□□□□ -0.59
ATP2B1-210ENST00000552275 TSKSQ9UJT2 592 aa11.38□□□□□ -0.59
ATP2B1-210ENST00000552275 ONECUT3O60422 494 aaPredicted RBP11.36□□□□□ -0.59
ATP2B1-210ENST00000552275 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
ATP2B1-210ENST00000552275 NBPF26B4DH59 902 aa11.34□□□□□ -0.59
ATP2B1-210ENST00000552275 MYT1LQ9UL68 1186 aa11.34□□□□□ -0.59
ATP2B1-210ENST00000552275 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
ATP2B1-210ENST00000552275 MYSM1Q5VVJ2 828 aa11.33□□□□□ -0.6
ATP2B1-210ENST00000552275 NUDT18Q6ZVK8 323 aa11.33□□□□□ -0.6
ATP2B1-210ENST00000552275 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
ATP2B1-210ENST00000552275 C3orf80F5H4A9 247 aa11.32□□□□□ -0.6
ATP2B1-210ENST00000552275 DNAJB2P25686 324 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms