RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 REREQ9P2R6 1566 aa9.15□□□□□ -0.95
CCDC65-204ENST00000552188 INO80Q9ULG1 1556 aaPredicted RBP9.15□□□□□ -0.95
CCDC65-204ENST00000552188 PTPRMP28827 1452 aa9.15□□□□□ -0.95
CCDC65-204ENST00000552188 CCDC141Q6ZP82 1450 aa9.14□□□□□ -0.95
CCDC65-204ENST00000552188 MYOM3Q5VTT5 1437 aa9.14□□□□□ -0.95
CCDC65-204ENST00000552188 ARHGEF5Q12774 1597 aa9.13□□□□□ -0.95
CCDC65-204ENST00000552188 MIA2Q96PC5 1412 aa9.13□□□□□ -0.95
CCDC65-204ENST00000552188 PTPN23Q9H3S7 1636 aa9.13□□□□□ -0.95
CCDC65-204ENST00000552188 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
CCDC65-204ENST00000552188 A2MP01023 1474 aa9.11□□□□□ -0.95
CCDC65-204ENST00000552188 MBD5Q9P267 1494 aa9.11□□□□□ -0.95
CCDC65-204ENST00000552188 AGLP35573 1532 aa9.1□□□□□ -0.95
CCDC65-204ENST00000552188 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
CCDC65-204ENST00000552188 RTEL1-TNFRSF6BF6WH68 1400 aa9.1□□□□□ -0.95
CCDC65-204ENST00000552188 CROCC2H7BZ55 1655 aa9.1□□□□□ -0.95
CCDC65-204ENST00000552188 C3P01024 1663 aa9.1□□□□□ -0.95
CCDC65-204ENST00000552188 GGT6Q6P531 493 aa9.09□□□□□ -0.95
CCDC65-204ENST00000552188 PREX1Q8TCU6 1659 aa9.09□□□□□ -0.95
CCDC65-204ENST00000552188 SETD1BQ9UPS6 1966 aaKnown RBP9.08□□□□□ -0.96
CCDC65-204ENST00000552188 MROH2AA6NES4 1674 aa9.08□□□□□ -0.96
CCDC65-204ENST00000552188 PLXNC1O60486 1568 aa9.07□□□□□ -0.96
CCDC65-204ENST00000552188 MAST1Q9Y2H9 1570 aa9.07□□□□□ -0.96
CCDC65-204ENST00000552188 FGD6Q6ZV73 1430 aa9.07□□□□□ -0.96
CCDC65-204ENST00000552188 DNMT1P26358 1616 aaKnown RBP9.07□□□□□ -0.96
CCDC65-204ENST00000552188 FKBP8Q14318 412 aa9.07□□□□□ -0.96
CCDC65-204ENST00000552188 FAM50AQ14320 339 aaKnown RBP9.07□□□□□ -0.96
CCDC65-204ENST00000552188 PPARGC1BQ86YN6 1023 aaKnown RBP9.07□□□□□ -0.96
CCDC65-204ENST00000552188 CNTLNQ9NXG0 1405 aa9.06□□□□□ -0.96
CCDC65-204ENST00000552188 KIF3BO15066 747 aa9.06□□□□□ -0.96
CCDC65-204ENST00000552188 CEBPAP49715 358 aaPredicted RBP9.06□□□□□ -0.96
CCDC65-204ENST00000552188 DHX29Q7Z478 1369 aaKnown RBP9.06□□□□□ -0.96
CCDC65-204ENST00000552188 ZBTB12Q9Y330 459 aaPredicted RBP9.05□□□□□ -0.96
CCDC65-204ENST00000552188 CFAP65Q6ZU64 1925 aaKnown RBP9.05□□□□□ -0.96
CCDC65-204ENST00000552188 EIF2AK4Q9P2K8 1649 aaKnown RBP9.04□□□□□ -0.96
CCDC65-204ENST00000552188 DAPK1P53355 1430 aa9.04□□□□□ -0.96
CCDC65-204ENST00000552188 TCOF1Q13428 1488 aaKnown RBP9.03□□□□□ -0.96
CCDC65-204ENST00000552188 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
CCDC65-204ENST00000552188 DUOX2Q9NRD8 1548 aa9.03□□□□□ -0.96
CCDC65-204ENST00000552188 SHANK2Q9UPX8 1470 aa9.02□□□□□ -0.96
CCDC65-204ENST00000552188 RRP7BPQ9NSQ0 103 aa9.02□□□□□ -0.97
CCDC65-204ENST00000552188 ABCC5O15440 1437 aa9.02□□□□□ -0.97
CCDC65-204ENST00000552188 UHRF1BP1Q6BDS2 1440 aa9.02□□□□□ -0.97
CCDC65-204ENST00000552188 CEP152O94986 1710 aa9.02□□□□□ -0.97
CCDC65-204ENST00000552188 WASHC2CQ9Y4E1 1318 aa9.02□□□□□ -0.97
CCDC65-204ENST00000552188 ZMYM3Q14202 1370 aa9.01□□□□□ -0.97
CCDC65-204ENST00000552188 ANKRD30AQ9BXX3 1397 aa9.01□□□□□ -0.97
CCDC65-204ENST00000552188 ZC3H13Q5T200 1668 aaKnown RBP9.01□□□□□ -0.97
CCDC65-204ENST00000552188 LMTK3Q96Q04 1460 aa9.01□□□□□ -0.97
CCDC65-204ENST00000552188 KDM5DQ9BY66 1539 aa9□□□□□ -0.97
CCDC65-204ENST00000552188 KIF15Q9NS87 1388 aa9□□□□□ -0.97
CCDC65-204ENST00000552188 ITGAEP38570 1179 aa9□□□□□ -0.97
CCDC65-204ENST00000552188 HSPA2P54652 639 aa9□□□□□ -0.97
CCDC65-204ENST00000552188 RNF17Q9BXT8 1623 aaKnown RBP9□□□□□ -0.97
CCDC65-204ENST00000552188 FAM135AQ9P2D6 1515 aa9□□□□□ -0.97
CCDC65-204ENST00000552188 KANK1Q14678 1352 aa8.98□□□□□ -0.97
CCDC65-204ENST00000552188 CAMSAP1Q5T5Y3 1602 aa8.98□□□□□ -0.97
CCDC65-204ENST00000552188 MYO3AQ8NEV4 1616 aa8.98□□□□□ -0.97
CCDC65-204ENST00000552188 NPATQ14207 1427 aa8.97□□□□□ -0.97
CCDC65-204ENST00000552188 ERBINQ96RT1 1412 aa8.97□□□□□ -0.97
CCDC65-204ENST00000552188 DEPDC5O75140 1603 aa8.95□□□□□ -0.98
CCDC65-204ENST00000552188 ZNF142P52746 1687 aaPredicted RBP8.95□□□□□ -0.98
CCDC65-204ENST00000552188 SPDYE4A6NLX3 237 aa8.95□□□□□ -0.98
CCDC65-204ENST00000552188 PTPRKQ15262 1439 aa8.95□□□□□ -0.98
CCDC65-204ENST00000552188 NCOA1Q15788 1441 aa8.95□□□□□ -0.98
CCDC65-204ENST00000552188 ADGRL2O95490 1459 aa8.95□□□□□ -0.98
CCDC65-204ENST00000552188 ABCC3O15438 1527 aa8.95□□□□□ -0.98
CCDC65-204ENST00000552188 STRCQ7RTU9 1775 aa8.94□□□□□ -0.98
CCDC65-204ENST00000552188 PZPP20742 1482 aa8.94□□□□□ -0.98
CCDC65-204ENST00000552188 PRDM15P57071 1507 aaPredicted RBP8.94□□□□□ -0.98
CCDC65-204ENST00000552188 CEP170BQ9Y4F5 1589 aaPredicted RBP8.94□□□□□ -0.98
CCDC65-204ENST00000552188 MROH1Q8NDA8 1641 aa8.94□□□□□ -0.98
CCDC65-204ENST00000552188 FBXO31Q5XUX0 539 aaPredicted RBP8.93□□□□□ -0.98
CCDC65-204ENST00000552188 TNRQ92752 1358 aa8.93□□□□□ -0.98
CCDC65-204ENST00000552188 ANKRD50Q9ULJ7 1429 aa8.93□□□□□ -0.98
CCDC65-204ENST00000552188 POLR1AO95602 1720 aaPredicted RBP8.92□□□□□ -0.98
CCDC65-204ENST00000552188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.92□□□□□ -0.98
CCDC65-204ENST00000552188 GCC2Q8IWJ2 1684 aa8.91□□□□□ -0.98
CCDC65-204ENST00000552188 A2ML1A8K2U0 1454 aa8.91□□□□□ -0.98
CCDC65-204ENST00000552188 RRBP1Q9P2E9 1410 aaKnown RBP8.9□□□□□ -0.98
CCDC65-204ENST00000552188 ROCK1Q13464 1354 aa8.9□□□□□ -0.98
CCDC65-204ENST00000552188 SPATA31D1Q6ZQQ2 1576 aa8.9□□□□□ -0.99
CCDC65-204ENST00000552188 NLRP1Q9C000 1473 aa8.89□□□□□ -0.99
CCDC65-204ENST00000552188 TET3O43151 1660 aa8.89□□□□□ -0.99
CCDC65-204ENST00000552188 THEMISQ8N1K5 641 aaPredicted RBP8.89□□□□□ -0.99
CCDC65-204ENST00000552188 STAG3Q9UJ98 1225 aa8.89□□□□□ -0.99
CCDC65-204ENST00000552188 UNC13BO14795 1591 aa8.89□□□□□ -0.99
CCDC65-204ENST00000552188 UGGT1Q9NYU2 1555 aa8.89□□□□□ -0.99
CCDC65-204ENST00000552188 ERVK-7P63135 1459 aa8.89□□□□□ -0.99
CCDC65-204ENST00000552188 NCKAP5LQ9HCH0 1330 aa8.88□□□□□ -0.99
CCDC65-204ENST00000552188 UBR1Q8IWV7 1749 aa8.88□□□□□ -0.99
CCDC65-204ENST00000552188 VWDEQ8N2E2 1590 aa8.87□□□□□ -0.99
CCDC65-204ENST00000552188 EFCAB6Q5THR3 1501 aa8.87□□□□□ -0.99
CCDC65-204ENST00000552188 LMTK2Q8IWU2 1503 aa8.87□□□□□ -0.99
CCDC65-204ENST00000552188 PKD2Q13563 968 aa8.87□□□□□ -0.99
CCDC65-204ENST00000552188 ZNF692Q9BU19 519 aaPredicted RBP8.87□□□□□ -0.99
CCDC65-204ENST00000552188 ARHGAP31Q2M1Z3 1444 aa8.87□□□□□ -0.99
CCDC65-204ENST00000552188 PIK3C2BO00750 1634 aa8.87□□□□□ -0.99
CCDC65-204ENST00000552188 IQGAP3Q86VI3 1631 aa8.87□□□□□ -0.99
CCDC65-204ENST00000552188 PLA2R1Q13018 1463 aa8.86□□□□□ -0.99
CCDC65-204ENST00000552188 ANKLE2Q86XL3 938 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms