RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 ARHGEF5Q12774 1597 aa11.33□□□□□ -0.6
RAB3IP-215ENST00000551641 ANKRD30BQ9BXX2 1392 aa11.33□□□□□ -0.6
RAB3IP-215ENST00000551641 PPRC1Q5VV67 1664 aaKnown RBP11.33□□□□□ -0.6
RAB3IP-215ENST00000551641 RPRD2Q5VT52 1461 aaKnown RBP11.33□□□□□ -0.6
RAB3IP-215ENST00000551641 ARAP3Q8WWN8 1544 aa11.33□□□□□ -0.6
RAB3IP-215ENST00000551641 PKD2Q13563 968 aa11.32□□□□□ -0.6
RAB3IP-215ENST00000551641 ATP7AQ04656 1500 aa11.32□□□□□ -0.6
RAB3IP-215ENST00000551641 CROCC2H7BZ55 1655 aa11.32□□□□□ -0.6
RAB3IP-215ENST00000551641 WASHC2AQ641Q2 1341 aa11.3□□□□□ -0.6
RAB3IP-215ENST00000551641 HSPA5P11021 654 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-215ENST00000551641 CFAP74Q9C0B2 1584 aa11.3□□□□□ -0.6
RAB3IP-215ENST00000551641 ADGRL2O95490 1459 aa11.3□□□□□ -0.6
RAB3IP-215ENST00000551641 SHANK2Q9UPX8 1470 aa11.3□□□□□ -0.6
RAB3IP-215ENST00000551641 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
RAB3IP-215ENST00000551641 ADGBQ8N7X0 1667 aa11.29□□□□□ -0.6
RAB3IP-215ENST00000551641 L3MBTL2Q969R5 705 aa11.29□□□□□ -0.6
RAB3IP-215ENST00000551641 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
RAB3IP-215ENST00000551641 MYT1Q01538 1121 aa11.28□□□□□ -0.6
RAB3IP-215ENST00000551641 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
RAB3IP-215ENST00000551641 PZPP20742 1482 aa11.27□□□□□ -0.6
RAB3IP-215ENST00000551641 KIDINS220Q9ULH0 1771 aa11.27□□□□□ -0.6
RAB3IP-215ENST00000551641 A2MP01023 1474 aa11.27□□□□□ -0.61
RAB3IP-215ENST00000551641 DHX29Q7Z478 1369 aaKnown RBP11.27□□□□□ -0.61
RAB3IP-215ENST00000551641 PIAS4Q8N2W9 510 aaPredicted RBP11.27□□□□□ -0.61
RAB3IP-215ENST00000551641 CNTLNQ9NXG0 1405 aa11.27□□□□□ -0.61
RAB3IP-215ENST00000551641 ESF1Q9H501 851 aaKnown RBP11.27□□□□□ -0.61
RAB3IP-215ENST00000551641 HECW2Q9P2P5 1572 aa11.26□□□□□ -0.61
RAB3IP-215ENST00000551641 SPATA31E1Q6ZUB1 1445 aa11.26□□□□□ -0.61
RAB3IP-215ENST00000551641 CHGAP10645 457 aaKnown RBP11.26□□□□□ -0.61
RAB3IP-215ENST00000551641 RTEL1-TNFRSF6BF6WH68 1400 aa11.25□□□□□ -0.61
RAB3IP-215ENST00000551641 RGL3Q3MIN7 710 aa11.25□□□□□ -0.61
RAB3IP-215ENST00000551641 ZNF326Q5BKZ1 582 aaKnown RBP11.25□□□□□ -0.61
RAB3IP-215ENST00000551641 TSHZ2Q9NRE2 1034 aa11.25□□□□□ -0.61
RAB3IP-215ENST00000551641 FRMPD1Q5SYB0 1578 aa11.25□□□□□ -0.61
RAB3IP-215ENST00000551641 RICTORQ6R327 1708 aa11.25□□□□□ -0.61
RAB3IP-215ENST00000551641 DUOX2Q9NRD8 1548 aa11.25□□□□□ -0.61
RAB3IP-215ENST00000551641 ABCA6Q8N139 1617 aa11.24□□□□□ -0.61
RAB3IP-215ENST00000551641 FKBP8Q14318 412 aa11.24□□□□□ -0.61
RAB3IP-215ENST00000551641 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
RAB3IP-215ENST00000551641 MLH3Q9UHC1 1453 aa11.24□□□□□ -0.61
RAB3IP-215ENST00000551641 INO80Q9ULG1 1556 aaPredicted RBP11.24□□□□□ -0.61
RAB3IP-215ENST00000551641 CFAP65Q6ZU64 1925 aaKnown RBP11.23□□□□□ -0.61
RAB3IP-215ENST00000551641 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
RAB3IP-215ENST00000551641 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
RAB3IP-215ENST00000551641 KANK1Q14678 1352 aa11.23□□□□□ -0.61
RAB3IP-215ENST00000551641 KDM5CP41229 1560 aa11.23□□□□□ -0.61
RAB3IP-215ENST00000551641 MAST1Q9Y2H9 1570 aa11.22□□□□□ -0.61
RAB3IP-215ENST00000551641 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
RAB3IP-215ENST00000551641 CEBPAP49715 358 aaPredicted RBP11.22□□□□□ -0.61
RAB3IP-215ENST00000551641 DIP2CQ9Y2E4 1556 aa11.21□□□□□ -0.61
RAB3IP-215ENST00000551641 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
RAB3IP-215ENST00000551641 ERBINQ96RT1 1412 aa11.21□□□□□ -0.61
RAB3IP-215ENST00000551641 PLXNC1O60486 1568 aa11.21□□□□□ -0.62
RAB3IP-215ENST00000551641 ATP10AO60312 1499 aa11.21□□□□□ -0.62
RAB3IP-215ENST00000551641 FBXO31Q5XUX0 539 aaPredicted RBP11.2□□□□□ -0.62
RAB3IP-215ENST00000551641 NEFLP07196 543 aa11.2□□□□□ -0.62
RAB3IP-215ENST00000551641 KDM5DQ9BY66 1539 aa11.19□□□□□ -0.62
RAB3IP-215ENST00000551641 FAM135AQ9P2D6 1515 aa11.18□□□□□ -0.62
RAB3IP-215ENST00000551641 NUTM2DQ5VT03 806 aaPredicted RBP11.18□□□□□ -0.62
RAB3IP-215ENST00000551641 PRKRIP1Q9H875 184 aaPredicted RBP11.18□□□□□ -0.62
RAB3IP-215ENST00000551641 BCANQ96GW7 911 aa11.17□□□□□ -0.62
RAB3IP-215ENST00000551641 KIF7Q2M1P5 1343 aa11.17□□□□□ -0.62
RAB3IP-215ENST00000551641 UHRF1BP1Q6BDS2 1440 aa11.16□□□□□ -0.62
RAB3IP-215ENST00000551641 HNRNPUQ00839 825 aaKnown RBP eCLIP11.16□□□□□ -0.62
RAB3IP-215ENST00000551641 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
RAB3IP-215ENST00000551641 MAGI2Q86UL8 1455 aa11.14□□□□□ -0.63
RAB3IP-215ENST00000551641 SIGLEC1Q9BZZ2 1709 aa11.14□□□□□ -0.63
RAB3IP-215ENST00000551641 ZMYM4Q5VZL5 1548 aa11.14□□□□□ -0.63
RAB3IP-215ENST00000551641 CCDC184Q52MB2 194 aa11.13□□□□□ -0.63
RAB3IP-215ENST00000551641 DCAF11Q8TEB1 546 aa11.13□□□□□ -0.63
RAB3IP-215ENST00000551641 PPP6R1Q9UPN7 881 aa11.13□□□□□ -0.63
RAB3IP-215ENST00000551641 ARHGEF40Q8TER5 1519 aa11.12□□□□□ -0.63
RAB3IP-215ENST00000551641 RALGAPBQ86X10 1494 aa11.12□□□□□ -0.63
RAB3IP-215ENST00000551641 CEP152O94986 1710 aa11.12□□□□□ -0.63
RAB3IP-215ENST00000551641 CCDC144AA2RUR9 1427 aa11.12□□□□□ -0.63
RAB3IP-215ENST00000551641 USP47Q96K76 1375 aa11.12□□□□□ -0.63
RAB3IP-215ENST00000551641 BCORL1Q5H9F3 1711 aa11.11□□□□□ -0.63
RAB3IP-215ENST00000551641 ERICH6BQ5W0A0 696 aa11.11□□□□□ -0.63
RAB3IP-215ENST00000551641 UGGT1Q9NYU2 1555 aa11.11□□□□□ -0.63
RAB3IP-215ENST00000551641 UNC13BO14795 1591 aa11.1□□□□□ -0.63
RAB3IP-215ENST00000551641 ADRA2BP18089 450 aa11.1□□□□□ -0.63
RAB3IP-215ENST00000551641 ZBED9Q6R2W3 1325 aa11.1□□□□□ -0.63
RAB3IP-215ENST00000551641 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
RAB3IP-215ENST00000551641 NPATQ14207 1427 aa11.09□□□□□ -0.63
RAB3IP-215ENST00000551641 MRS2Q9HD23 443 aa11.08□□□□□ -0.63
RAB3IP-215ENST00000551641 ZMYM3Q14202 1370 aa11.08□□□□□ -0.64
RAB3IP-215ENST00000551641 IDI1Q13907 227 aa11.08□□□□□ -0.64
RAB3IP-215ENST00000551641 ABCC3O15438 1527 aa11.08□□□□□ -0.64
RAB3IP-215ENST00000551641 IQGAP3Q86VI3 1631 aa11.08□□□□□ -0.64
RAB3IP-215ENST00000551641 PLA2R1Q13018 1463 aa11.08□□□□□ -0.64
RAB3IP-215ENST00000551641 ROCK2O75116 1388 aaKnown RBP11.07□□□□□ -0.64
RAB3IP-215ENST00000551641 PRDM15P57071 1507 aaPredicted RBP11.07□□□□□ -0.64
RAB3IP-215ENST00000551641 EIF2AK4Q9P2K8 1649 aaKnown RBP11.07□□□□□ -0.64
RAB3IP-215ENST00000551641 E9PCH4 1651 aa11.07□□□□□ -0.64
RAB3IP-215ENST00000551641 CLTCQ00610 1675 aaKnown RBP11.07□□□□□ -0.64
RAB3IP-215ENST00000551641 DEPDC5O75140 1603 aa11.05□□□□□ -0.64
RAB3IP-215ENST00000551641 FAM9BQ8IZU0 186 aa11.04□□□□□ -0.64
RAB3IP-215ENST00000551641 RNF17Q9BXT8 1623 aaKnown RBP11.04□□□□□ -0.64
RAB3IP-215ENST00000551641 RBM19Q9Y4C8 960 aaKnown RBP11.04□□□□□ -0.64
RAB3IP-215ENST00000551641 EFCAB6Q5THR3 1501 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms