RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	FGD6	Q6ZV73	1430 aa		13.85	□□□□□ -0.19
ATXN2-223	ENST00000551551	SHANK2	Q9UPX8	1470 aa		13.85	□□□□□ -0.19
ATXN2-223	ENST00000551551	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.84	□□□□□ -0.19
ATXN2-223	ENST00000551551	PREX1	Q8TCU6	1659 aa		13.84	□□□□□ -0.19
ATXN2-223	ENST00000551551	KANK1	Q14678	1352 aa		13.83	□□□□□ -0.19
ATXN2-223	ENST00000551551	HSPA2	P54652	639 aa		13.83	□□□□□ -0.2
ATXN2-223	ENST00000551551	SIGLEC1	Q9BZZ2	1709 aa		13.83	□□□□□ -0.2
ATXN2-223	ENST00000551551	TCOF1	Q13428	1488 aa	Known RBP	13.82	□□□□□ -0.2
ATXN2-223	ENST00000551551	DUOX2	Q9NRD8	1548 aa		13.82	□□□□□ -0.2
ATXN2-223	ENST00000551551	SCAF1	Q9H7N4	1312 aa	Known RBP	13.82	□□□□□ -0.2
ATXN2-223	ENST00000551551	KCNA4	P22459	653 aa		13.81	□□□□□ -0.2
ATXN2-223	ENST00000551551	FAM50A	Q14320	339 aa	Known RBP	13.81	□□□□□ -0.2
ATXN2-223	ENST00000551551	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
ATXN2-223	ENST00000551551	ERBIN	Q96RT1	1412 aa		13.81	□□□□□ -0.2
ATXN2-223	ENST00000551551	RRP7BP	Q9NSQ0	103 aa		13.8	□□□□□ -0.2
ATXN2-223	ENST00000551551	KIF15	Q9NS87	1388 aa		13.8	□□□□□ -0.2
ATXN2-223	ENST00000551551	PTPRT	O14522	1441 aa		13.8	□□□□□ -0.2
ATXN2-223	ENST00000551551	ABCC5	O15440	1437 aa		13.8	□□□□□ -0.2
ATXN2-223	ENST00000551551	PTPRK	Q15262	1439 aa		13.8	□□□□□ -0.2
ATXN2-223	ENST00000551551	KDM5D	Q9BY66	1539 aa		13.8	□□□□□ -0.2
ATXN2-223	ENST00000551551	PTPN23	Q9H3S7	1636 aa		13.79	□□□□□ -0.2
ATXN2-223	ENST00000551551	C3	P01024	1663 aa		13.79	□□□□□ -0.2
ATXN2-223	ENST00000551551	FBXO41	Q8TF61	875 aa		13.79	□□□□□ -0.2
ATXN2-223	ENST00000551551	DAPK1	P53355	1430 aa		13.79	□□□□□ -0.2
ATXN2-223	ENST00000551551	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.78	□□□□□ -0.2
ATXN2-223	ENST00000551551	PZP	P20742	1482 aa		13.77	□□□□□ -0.21
ATXN2-223	ENST00000551551	NCOA1	Q15788	1441 aa		13.77	□□□□□ -0.21
ATXN2-223	ENST00000551551	ACIN1	Q9UKV3	1341 aa	Known RBP	13.77	□□□□□ -0.21
ATXN2-223	ENST00000551551	NLRP1	Q9C000	1473 aa		13.76	□□□□□ -0.21
ATXN2-223	ENST00000551551	TNR	Q92752	1358 aa		13.76	□□□□□ -0.21
ATXN2-223	ENST00000551551	ANKLE2	Q86XL3	938 aa		13.76	□□□□□ -0.21
ATXN2-223	ENST00000551551	PLA2R1	Q13018	1463 aa		13.75	□□□□□ -0.21
ATXN2-223	ENST00000551551	HDGF	P51858	240 aa	Known RBP	13.75	□□□□□ -0.21
ATXN2-223	ENST00000551551	ARHGAP31	Q2M1Z3	1444 aa		13.74	□□□□□ -0.21
ATXN2-223	ENST00000551551	ROCK1	Q13464	1354 aa		13.73	□□□□□ -0.21
ATXN2-223	ENST00000551551	CLTC	Q00610	1675 aa	Known RBP	13.73	□□□□□ -0.21
ATXN2-223	ENST00000551551	DNMT1	P26358	1616 aa	Known RBP	13.73	□□□□□ -0.21
ATXN2-223	ENST00000551551	CERK	Q8TCT0	537 aa		13.73	□□□□□ -0.21
ATXN2-223	ENST00000551551	CHIC2	Q9UKJ5	165 aa		13.73	□□□□□ -0.21
ATXN2-223	ENST00000551551	A2ML1	A8K2U0	1454 aa		13.73	□□□□□ -0.21
ATXN2-223	ENST00000551551	ZC3H13	Q5T200	1668 aa	Known RBP	13.72	□□□□□ -0.21
ATXN2-223	ENST00000551551	SLC52A1	Q9NWF4	448 aa		13.72	□□□□□ -0.21
ATXN2-223	ENST00000551551	ADGRL2	O95490	1459 aa		13.72	□□□□□ -0.21
ATXN2-223	ENST00000551551	RNF17	Q9BXT8	1623 aa	Known RBP	13.72	□□□□□ -0.21
ATXN2-223	ENST00000551551	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.71	□□□□□ -0.21	6e-9	■■□□□ 11.5
ATXN2-223	ENST00000551551	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.7	□□□□□ -0.22
ATXN2-223	ENST00000551551	EID1	Q9Y6B2	187 aa		13.7	□□□□□ -0.22
ATXN2-223	ENST00000551551	ANKRD50	Q9ULJ7	1429 aa		13.7	□□□□□ -0.22
ATXN2-223	ENST00000551551	STAG3	Q9UJ98	1225 aa		13.69	□□□□□ -0.22
ATXN2-223	ENST00000551551	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.67	□□□□□ -0.22
ATXN2-223	ENST00000551551	CAMSAP1	Q5T5Y3	1602 aa		13.67	□□□□□ -0.22
ATXN2-223	ENST00000551551	ABCC3	O15438	1527 aa		13.66	□□□□□ -0.22
ATXN2-223	ENST00000551551	IQSEC2	Q5JU85	1478 aa		13.66	□□□□□ -0.22
ATXN2-223	ENST00000551551	CROCC2	H7BZ55	1655 aa		13.66	□□□□□ -0.22
ATXN2-223	ENST00000551551	RPRD2	Q5VT52	1461 aa	Known RBP	13.65	□□□□□ -0.22
ATXN2-223	ENST00000551551	ZNF142	P52746	1687 aa	Predicted RBP	13.65	□□□□□ -0.22
ATXN2-223	ENST00000551551	NCKAP5L	Q9HCH0	1330 aa		13.64	□□□□□ -0.23
ATXN2-223	ENST00000551551	PRDM15	P57071	1507 aa	Predicted RBP	13.64	□□□□□ -0.23
ATXN2-223	ENST00000551551	LMTK2	Q8IWU2	1503 aa		13.64	□□□□□ -0.23
ATXN2-223	ENST00000551551	UGGT1	Q9NYU2	1555 aa		13.64	□□□□□ -0.23
ATXN2-223	ENST00000551551	SPATA31D1	Q6ZQQ2	1576 aa		13.63	□□□□□ -0.23
ATXN2-223	ENST00000551551	MYO3A	Q8NEV4	1616 aa		13.63	□□□□□ -0.23
ATXN2-223	ENST00000551551	STRC	Q7RTU9	1775 aa		13.63	□□□□□ -0.23
ATXN2-223	ENST00000551551	ERVK-7	P63135	1459 aa		13.61	□□□□□ -0.23
ATXN2-223	ENST00000551551	DEPDC5	O75140	1603 aa		13.61	□□□□□ -0.23
ATXN2-223	ENST00000551551	TXNDC2	Q86VQ3	553 aa		13.6	□□□□□ -0.23
ATXN2-223	ENST00000551551	RRBP1	Q9P2E9	1410 aa	Known RBP	13.6	□□□□□ -0.23
ATXN2-223	ENST00000551551	MED14	O60244	1454 aa		13.6	□□□□□ -0.23
ATXN2-223	ENST00000551551	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
ATXN2-223	ENST00000551551	ITGAE	P38570	1179 aa		13.58	□□□□□ -0.24
ATXN2-223	ENST00000551551	IDI1	Q13907	227 aa		13.58	□□□□□ -0.24
ATXN2-223	ENST00000551551	TOM1	O60784	492 aa		13.57	□□□□□ -0.24
ATXN2-223	ENST00000551551	VWDE	Q8N2E2	1590 aa		13.57	□□□□□ -0.24
ATXN2-223	ENST00000551551	NUP155	O75694	1391 aa		13.57	□□□□□ -0.24
ATXN2-223	ENST00000551551	MROH1	Q8NDA8	1641 aa		13.57	□□□□□ -0.24
ATXN2-223	ENST00000551551	NPHP4	O75161	1426 aa	Predicted RBP	13.56	□□□□□ -0.24
ATXN2-223	ENST00000551551	KDM5A	P29375	1690 aa	Known RBP	13.55	□□□□□ -0.24
ATXN2-223	ENST00000551551	TMEM2	Q9UHN6	1383 aa		13.55	□□□□□ -0.24
ATXN2-223	ENST00000551551	NOS1	P29475	1434 aa		13.55	□□□□□ -0.24
ATXN2-223	ENST00000551551	CPS1	P31327	1500 aa		13.54	□□□□□ -0.24
ATXN2-223	ENST00000551551	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.53	□□□□□ -0.24
ATXN2-223	ENST00000551551	SCAF11	Q99590	1463 aa	Known RBP	13.53	□□□□□ -0.24
ATXN2-223	ENST00000551551	SLIT1	O75093	1534 aa		13.53	□□□□□ -0.24
ATXN2-223	ENST00000551551	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.52	□□□□□ -0.25
ATXN2-223	ENST00000551551	EFCAB6	Q5THR3	1501 aa		13.52	□□□□□ -0.25
ATXN2-223	ENST00000551551	CEP152	O94986	1710 aa		13.5	□□□□□ -0.25
ATXN2-223	ENST00000551551	LTBP4	Q8N2S1	1624 aa		13.5	□□□□□ -0.25
ATXN2-223	ENST00000551551	ARHGAP23	Q9P227	1491 aa		13.5	□□□□□ -0.25
ATXN2-223	ENST00000551551	UBAP1L	F5GYI3	381 aa		13.49	□□□□□ -0.25
ATXN2-223	ENST00000551551	PPP1R15A	O75807	674 aa	Predicted RBP	13.49	□□□□□ -0.25
ATXN2-223	ENST00000551551	BCAN	Q96GW7	911 aa		13.49	□□□□□ -0.25
ATXN2-223	ENST00000551551	TET3	O43151	1660 aa		13.49	□□□□□ -0.25
ATXN2-223	ENST00000551551	POLR1A	O95602	1720 aa	Predicted RBP	13.48	□□□□□ -0.25
ATXN2-223	ENST00000551551	LTK	P29376	864 aa		13.48	□□□□□ -0.25
ATXN2-223	ENST00000551551	UNC13B	O14795	1591 aa		13.48	□□□□□ -0.25
ATXN2-223	ENST00000551551	HFM1	A2PYH4	1435 aa		13.47	□□□□□ -0.25
ATXN2-223	ENST00000551551	KCNA6	P17658	529 aa		13.47	□□□□□ -0.25
ATXN2-223	ENST00000551551	TRIM52	Q96A61	297 aa		13.47	□□□□□ -0.25
ATXN2-223	ENST00000551551	TBX22	Q9Y458	520 aa		13.47	□□□□□ -0.25
ATXN2-223	ENST00000551551	UBR1	Q8IWV7	1749 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms