RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 NCOA1Q15788 1441 aa31.58■■■□□ 2.65
SLC48A1-208ENST00000551301 MYO3AQ8NEV4 1616 aa31.57■■■□□ 2.64
SLC48A1-208ENST00000551301 PTPN23Q9H3S7 1636 aa31.57■■■□□ 2.64
SLC48A1-208ENST00000551301 CAMSAP1Q5T5Y3 1602 aa31.57■■■□□ 2.64
SLC48A1-208ENST00000551301 FGD6Q6ZV73 1430 aa31.54■■■□□ 2.64
SLC48A1-208ENST00000551301 CEP170BQ9Y4F5 1589 aaPredicted RBP31.54■■■□□ 2.64
SLC48A1-208ENST00000551301 ZNF142P52746 1687 aaPredicted RBP31.54■■■□□ 2.64
SLC48A1-208ENST00000551301 PZPP20742 1482 aa31.52■■■□□ 2.64
SLC48A1-208ENST00000551301 EIF2AK4Q9P2K8 1649 aaKnown RBP31.52■■■□□ 2.64
SLC48A1-208ENST00000551301 SHANK2Q9UPX8 1470 aa31.52■■■□□ 2.64
SLC48A1-208ENST00000551301 DUOX2Q9NRD8 1548 aa31.51■■■□□ 2.63
SLC48A1-208ENST00000551301 TNRQ92752 1358 aa31.51■■■□□ 2.63
SLC48A1-208ENST00000551301 RNF17Q9BXT8 1623 aaKnown RBP31.49■■■□□ 2.63
SLC48A1-208ENST00000551301 PKD2Q13563 968 aa31.49■■■□□ 2.63
SLC48A1-208ENST00000551301 ABCC5O15440 1437 aa31.49■■■□□ 2.63
SLC48A1-208ENST00000551301 A2ML1A8K2U0 1454 aa31.48■■■□□ 2.63
SLC48A1-208ENST00000551301 KIF15Q9NS87 1388 aa31.48■■■□□ 2.63
SLC48A1-208ENST00000551301 FBXO31Q5XUX0 539 aaPredicted RBP31.48■■■□□ 2.63
SLC48A1-208ENST00000551301 PLA2R1Q13018 1463 aa31.47■■■□□ 2.63
SLC48A1-208ENST00000551301 TCOF1Q13428 1488 aaKnown RBP31.46■■■□□ 2.63
SLC48A1-208ENST00000551301 CROCC2H7BZ55 1655 aa31.46■■■□□ 2.63
SLC48A1-208ENST00000551301 DAPK1P53355 1430 aa31.46■■■□□ 2.63
SLC48A1-208ENST00000551301 RRP7BPQ9NSQ0 103 aa31.45■■■□□ 2.63
SLC48A1-208ENST00000551301 NCKAP5LQ9HCH0 1330 aa31.45■■■□□ 2.62
SLC48A1-208ENST00000551301 ZC3H13Q5T200 1668 aaKnown RBP31.44■■■□□ 2.62
SLC48A1-208ENST00000551301 DNMT1P26358 1616 aaKnown RBP31.44■■■□□ 2.62
SLC48A1-208ENST00000551301 ERBINQ96RT1 1412 aa31.41■■■□□ 2.62
SLC48A1-208ENST00000551301 ABCC3O15438 1527 aa31.41■■■□□ 2.62
SLC48A1-208ENST00000551301 ANKRD30AQ9BXX3 1397 aa31.41■■■□□ 2.62
SLC48A1-208ENST00000551301 FAM50AQ14320 339 aaKnown RBP31.38■■■□□ 2.61
SLC48A1-208ENST00000551301 NLRP1Q9C000 1473 aa31.38■■■□□ 2.61
SLC48A1-208ENST00000551301 THEMISQ8N1K5 641 aaPredicted RBP31.37■■■□□ 2.61
SLC48A1-208ENST00000551301 CHIC2Q9UKJ5 165 aa31.37■■■□□ 2.61
SLC48A1-208ENST00000551301 KANK1Q14678 1352 aa31.34■■■□□ 2.61
SLC48A1-208ENST00000551301 MROH1Q8NDA8 1641 aa31.32■■■□□ 2.6
SLC48A1-208ENST00000551301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.32■■■□□ 2.6
SLC48A1-208ENST00000551301 ANKLE2Q86XL3 938 aa31.29■■■□□ 2.6
SLC48A1-208ENST00000551301 UGGT1Q9NYU2 1555 aa31.29■■■□□ 2.6
SLC48A1-208ENST00000551301 CEP152O94986 1710 aa31.29■■■□□ 2.6
SLC48A1-208ENST00000551301 PRDM15P57071 1507 aaPredicted RBP31.29■■■□□ 2.6
SLC48A1-208ENST00000551301 SPATA31D1Q6ZQQ2 1576 aa31.27■■■□□ 2.6
SLC48A1-208ENST00000551301 LTBP4Q8N2S1 1624 aa31.27■■■□□ 2.6
SLC48A1-208ENST00000551301 ERVK-7P63135 1459 aa31.27■■■□□ 2.6
SLC48A1-208ENST00000551301 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.25■■■□□ 2.59
SLC48A1-208ENST00000551301 IQSEC2Q5JU85 1478 aa31.24■■■□□ 2.59
SLC48A1-208ENST00000551301 POLR1AO95602 1720 aaPredicted RBP31.24■■■□□ 2.59
SLC48A1-208ENST00000551301 ZNF335Q9H4Z2 1342 aaPredicted RBP31.24■■■□□ 2.59
SLC48A1-208ENST00000551301 ARHGAP31Q2M1Z3 1444 aa31.23■■■□□ 2.59
SLC48A1-208ENST00000551301 ADGRL2O95490 1459 aa31.22■■■□□ 2.59
SLC48A1-208ENST00000551301 DEPDC5O75140 1603 aa31.21■■■□□ 2.59
SLC48A1-208ENST00000551301 CFAP65Q6ZU64 1925 aaKnown RBP31.21■■■□□ 2.59
SLC48A1-208ENST00000551301 ANKRD50Q9ULJ7 1429 aa31.13■■■□□ 2.57
SLC48A1-208ENST00000551301 NEURL4Q96JN8 1562 aa31.13■■■□□ 2.57
SLC48A1-208ENST00000551301 NPHP4O75161 1426 aaPredicted RBP31.11■■■□□ 2.57
SLC48A1-208ENST00000551301 LMTK2Q8IWU2 1503 aa31.1■■■□□ 2.57
SLC48A1-208ENST00000551301 STAG3Q9UJ98 1225 aa31.1■■■□□ 2.57
SLC48A1-208ENST00000551301 MED14O60244 1454 aa31.09■■■□□ 2.57
SLC48A1-208ENST00000551301 VWDEQ8N2E2 1590 aa31.07■■■□□ 2.56
SLC48A1-208ENST00000551301 UBR1Q8IWV7 1749 aa31.05■■■□□ 2.56
SLC48A1-208ENST00000551301 PPARGC1BQ86YN6 1023 aaKnown RBP31.05■■■□□ 2.56
SLC48A1-208ENST00000551301 EID1Q9Y6B2 187 aa31.05■■■□□ 2.56
SLC48A1-208ENST00000551301 CPS1P31327 1500 aa31.04■■■□□ 2.56
SLC48A1-208ENST00000551301 UBAP1LF5GYI3 381 aa31.04■■■□□ 2.56
SLC48A1-208ENST00000551301 ROCK1Q13464 1354 aa31.04■■■□□ 2.56
SLC48A1-208ENST00000551301 IQGAP1P46940 1657 aa31.03■■■□□ 2.56
SLC48A1-208ENST00000551301 EFCAB6Q5THR3 1501 aa31.02■■■□□ 2.56
SLC48A1-208ENST00000551301 ITGAEP38570 1179 aa31.01■■■□□ 2.55
SLC48A1-208ENST00000551301 TXNDC2Q86VQ3 553 aa31■■■□□ 2.55
SLC48A1-208ENST00000551301 SCAF11Q99590 1463 aaKnown RBP31■■■□□ 2.55
SLC48A1-208ENST00000551301 RPRD2Q5VT52 1461 aaKnown RBP30.96■■■□□ 2.55
SLC48A1-208ENST00000551301 PIK3C2BO00750 1634 aa30.96■■■□□ 2.55
SLC48A1-208ENST00000551301 IDI1Q13907 227 aa30.96■■■□□ 2.55
SLC48A1-208ENST00000551301 SLC52A1Q9NWF4 448 aa30.96■■■□□ 2.55
SLC48A1-208ENST00000551301 SLIT1O75093 1534 aa30.96■■■□□ 2.55
SLC48A1-208ENST00000551301 ARHGAP23Q9P227 1491 aa30.94■■■□□ 2.54
SLC48A1-208ENST00000551301 NOS1P29475 1434 aa30.93■■■□□ 2.54
SLC48A1-208ENST00000551301 KDM5AP29375 1690 aaKnown RBP30.93■■■□□ 2.54
SLC48A1-208ENST00000551301 TMEM2Q9UHN6 1383 aa30.92■■■□□ 2.54
SLC48A1-208ENST00000551301 TET3O43151 1660 aa30.91■■■□□ 2.54
SLC48A1-208ENST00000551301 TOM1O60784 492 aa30.91■■■□□ 2.54
SLC48A1-208ENST00000551301 LTKP29376 864 aa30.91■■■□□ 2.54
SLC48A1-208ENST00000551301 UNC13BO14795 1591 aa30.9■■■□□ 2.54
SLC48A1-208ENST00000551301 SYNMO15061 1565 aa30.89■■■□□ 2.54
SLC48A1-208ENST00000551301 GCC2Q8IWJ2 1684 aa30.86■■■□□ 2.53
SLC48A1-208ENST00000551301 SCAF1Q9H7N4 1312 aaKnown RBP30.85■■■□□ 2.53
SLC48A1-208ENST00000551301 ADGRB3O60242 1522 aa30.83■■■□□ 2.53
SLC48A1-208ENST00000551301 NUP155O75694 1391 aa30.83■■■□□ 2.53
SLC48A1-208ENST00000551301 HDGFP51858 240 aaKnown RBP30.82■■■□□ 2.52
SLC48A1-208ENST00000551301 PIP4K2BP78356 416 aa30.79■■■□□ 2.52
SLC48A1-208ENST00000551301 BCANQ96GW7 911 aa30.79■■■□□ 2.52
SLC48A1-208ENST00000551301 IQGAP3Q86VI3 1631 aa30.79■■■□□ 2.52
SLC48A1-208ENST00000551301 RRBP1Q9P2E9 1410 aaKnown RBP30.78■■■□□ 2.52
SLC48A1-208ENST00000551301 LRRC7Q96NW7 1537 aa30.74■■■□□ 2.51
SLC48A1-208ENST00000551301 PPP1R15AO75807 674 aaPredicted RBP30.74■■■□□ 2.51
SLC48A1-208ENST00000551301 CHGAP10645 457 aaKnown RBP30.74■■■□□ 2.51
SLC48A1-208ENST00000551301 DISP3Q9P2K9 1392 aa30.73■■■□□ 2.51
SLC48A1-208ENST00000551301 E9PCH4 1651 aa30.73■■■□□ 2.51
SLC48A1-208ENST00000551301 STRCP1A6NGW2 1772 aa30.72■■■□□ 2.51
SLC48A1-208ENST00000551301 SLC26A8Q96RN1 970 aa30.7■■■□□ 2.51
SLC48A1-208ENST00000551301 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms