RNA–Protein interactions for RNA: ENST00000551297.6

TMEM116-214, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-214ENST00000551297 RIMBP3Q9UFD9 1639 aa11.04□□□□□ -0.64
TMEM116-214ENST00000551297 BCORL1Q5H9F3 1711 aa11.03□□□□□ -0.64
TMEM116-214ENST00000551297 MAP3K4Q9Y6R4 1608 aa11.02□□□□□ -0.64
TMEM116-214ENST00000551297 MLH3Q9UHC1 1453 aa11.02□□□□□ -0.65
TMEM116-214ENST00000551297 POLR1AO95602 1720 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-214ENST00000551297 EIF4G2P78344 907 aaKnown RBP eCLIP11.02□□□□□ -0.65
TMEM116-214ENST00000551297 L3MBTL2Q969R5 705 aa11.02□□□□□ -0.65
TMEM116-214ENST00000551297 RNF17Q9BXT8 1623 aaKnown RBP11.02□□□□□ -0.65
TMEM116-214ENST00000551297 RALGAPBQ86X10 1494 aa11.01□□□□□ -0.65
TMEM116-214ENST00000551297 VWDEQ8N2E2 1590 aa11.01□□□□□ -0.65
TMEM116-214ENST00000551297 NEURL4Q96JN8 1562 aa11.01□□□□□ -0.65
TMEM116-214ENST00000551297 DHX29Q7Z478 1369 aaKnown RBP11.01□□□□□ -0.65
TMEM116-214ENST00000551297 TRPM2O94759 1503 aa11□□□□□ -0.65
TMEM116-214ENST00000551297 KIDINS220Q9ULH0 1771 aa11□□□□□ -0.65
TMEM116-214ENST00000551297 LMTK2Q8IWU2 1503 aa10.99□□□□□ -0.65
TMEM116-214ENST00000551297 STAC3Q96MF2 364 aa10.99□□□□□ -0.65
TMEM116-214ENST00000551297 LAMC1P11047 1609 aa10.98□□□□□ -0.65
TMEM116-214ENST00000551297 SPHKAPQ2M3C7 1700 aa10.98□□□□□ -0.65
TMEM116-214ENST00000551297 FOXD1Q16676 465 aa10.98□□□□□ -0.65
TMEM116-214ENST00000551297 A2MP01023 1474 aa10.98□□□□□ -0.65
TMEM116-214ENST00000551297 DIP2BQ9P265 1576 aa10.97□□□□□ -0.65
TMEM116-214ENST00000551297 CEP152O94986 1710 aa10.96□□□□□ -0.65
TMEM116-214ENST00000551297 E9PCH4 1651 aa10.96□□□□□ -0.65
TMEM116-214ENST00000551297 ZC3H13Q5T200 1668 aaKnown RBP10.96□□□□□ -0.65
TMEM116-214ENST00000551297 EFCAB6Q5THR3 1501 aa10.96□□□□□ -0.65
TMEM116-214ENST00000551297 ZMYM4Q5VZL5 1548 aa10.95□□□□□ -0.66
TMEM116-214ENST00000551297 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
TMEM116-214ENST00000551297 POTEDQ86YR6 584 aa10.95□□□□□ -0.66
TMEM116-214ENST00000551297 MIER1Q8N108 512 aa10.95□□□□□ -0.66
TMEM116-214ENST00000551297 AFAP1Q8N556 730 aa10.95□□□□□ -0.66
TMEM116-214ENST00000551297 MYT1LQ9UL68 1186 aa10.95□□□□□ -0.66
TMEM116-214ENST00000551297 MROH1Q8NDA8 1641 aa10.95□□□□□ -0.66
TMEM116-214ENST00000551297 PTPRTO14522 1441 aa10.94□□□□□ -0.66
TMEM116-214ENST00000551297 RICTORQ6R327 1708 aa10.94□□□□□ -0.66
TMEM116-214ENST00000551297 HSPA5P11021 654 aaKnown RBP10.93□□□□□ -0.66
TMEM116-214ENST00000551297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.66
TMEM116-214ENST00000551297 ABCA6Q8N139 1617 aa10.93□□□□□ -0.66
TMEM116-214ENST00000551297 SPATA31E1Q6ZUB1 1445 aa10.92□□□□□ -0.66
TMEM116-214ENST00000551297 ROCK2O75116 1388 aaKnown RBP10.92□□□□□ -0.66
TMEM116-214ENST00000551297 USP47Q96K76 1375 aa10.92□□□□□ -0.66
TMEM116-214ENST00000551297 TRPM1Q7Z4N2 1603 aa10.92□□□□□ -0.66
TMEM116-214ENST00000551297 ANP32CO43423 234 aa10.92□□□□□ -0.66
TMEM116-214ENST00000551297 PLA2R1Q13018 1463 aa10.92□□□□□ -0.66
TMEM116-214ENST00000551297 PRAG1Q86YV5 1406 aa10.92□□□□□ -0.66
TMEM116-214ENST00000551297 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
TMEM116-214ENST00000551297 REREQ9P2R6 1566 aa10.91□□□□□ -0.66
TMEM116-214ENST00000551297 DIP2CQ9Y2E4 1556 aa10.91□□□□□ -0.66
TMEM116-214ENST00000551297 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.66
TMEM116-214ENST00000551297 CCER2I3L3R5 266 aa10.9□□□□□ -0.66
TMEM116-214ENST00000551297 GPRASP1Q5JY77 1395 aa10.9□□□□□ -0.67
TMEM116-214ENST00000551297 KIF3BO15066 747 aa10.89□□□□□ -0.67
TMEM116-214ENST00000551297 NBPF8Q3BBV2 869 aa10.89□□□□□ -0.67
TMEM116-214ENST00000551297 KIAA1210Q9ULL0 1709 aa10.89□□□□□ -0.67
TMEM116-214ENST00000551297 CCDC7Q96M83 1385 aa10.89□□□□□ -0.67
TMEM116-214ENST00000551297 PPRC1Q5VV67 1664 aaKnown RBP10.89□□□□□ -0.67
TMEM116-214ENST00000551297 KIF1BO60333 1816 aa10.88□□□□□ -0.67
TMEM116-214ENST00000551297 CLTCL1P53675 1640 aa10.88□□□□□ -0.67
TMEM116-214ENST00000551297 DDX10Q13206 875 aaKnown RBP10.88□□□□□ -0.67
TMEM116-214ENST00000551297 CYB5RLQ6IPT4 315 aa10.88□□□□□ -0.67
TMEM116-214ENST00000551297 MYOM2P54296 1465 aa10.87□□□□□ -0.67
TMEM116-214ENST00000551297 ABCC3O15438 1527 aa10.87□□□□□ -0.67
TMEM116-214ENST00000551297 CAMSAP1Q5T5Y3 1602 aa10.87□□□□□ -0.67
TMEM116-214ENST00000551297 MADDQ8WXG6 1647 aa10.87□□□□□ -0.67
TMEM116-214ENST00000551297 DCAF11Q8TEB1 546 aa10.86□□□□□ -0.67
TMEM116-214ENST00000551297 CARD11Q9BXL7 1154 aa10.86□□□□□ -0.67
TMEM116-214ENST00000551297 ARHGAP31Q2M1Z3 1444 aa10.85□□□□□ -0.67
TMEM116-214ENST00000551297 AGLP35573 1532 aa10.85□□□□□ -0.67
TMEM116-214ENST00000551297 ZNF326Q5BKZ1 582 aaKnown RBP10.85□□□□□ -0.67
TMEM116-214ENST00000551297 WASHC2AQ641Q2 1341 aa10.84□□□□□ -0.67
TMEM116-214ENST00000551297 SLC24A1O60721 1099 aa10.84□□□□□ -0.67
TMEM116-214ENST00000551297 EIF3AQ14152 1382 aaKnown RBP10.84□□□□□ -0.67
TMEM116-214ENST00000551297 ADGRB3O60242 1522 aa10.84□□□□□ -0.67
TMEM116-214ENST00000551297 ARHGEF40Q8TER5 1519 aa10.84□□□□□ -0.67
TMEM116-214ENST00000551297 FAM69CQ0P6D2 419 aa10.83□□□□□ -0.68
TMEM116-214ENST00000551297 PPP6R1Q9UPN7 881 aa10.83□□□□□ -0.68
TMEM116-214ENST00000551297 IFT172Q9UG01 1749 aa10.82□□□□□ -0.68
TMEM116-214ENST00000551297 KTN1Q86UP2 1357 aaKnown RBP10.81□□□□□ -0.68
TMEM116-214ENST00000551297 KIF7Q2M1P5 1343 aa10.81□□□□□ -0.68
TMEM116-214ENST00000551297 IQGAP1P46940 1657 aa10.8□□□□□ -0.68
TMEM116-214ENST00000551297 KIF13AQ9H1H9 1805 aa10.8□□□□□ -0.68
TMEM116-214ENST00000551297 HIRIP3Q9BW71 556 aaPredicted RBP10.8□□□□□ -0.68
TMEM116-214ENST00000551297 KDM2AQ9Y2K7 1162 aa10.8□□□□□ -0.68
TMEM116-214ENST00000551297 NPATQ14207 1427 aa10.8□□□□□ -0.68
TMEM116-214ENST00000551297 COL17A1Q9UMD9 1497 aaPredicted RBP10.8□□□□□ -0.68
TMEM116-214ENST00000551297 NOS1P29475 1434 aa10.79□□□□□ -0.68
TMEM116-214ENST00000551297 YTHDC1Q96MU7 727 aaKnown RBP10.79□□□□□ -0.68
TMEM116-214ENST00000551297 PIK3C2BO00750 1634 aa10.79□□□□□ -0.68
TMEM116-214ENST00000551297 SCAF11Q99590 1463 aaKnown RBP10.79□□□□□ -0.68
TMEM116-214ENST00000551297 RPGRIP1LQ68CZ1 1315 aa10.79□□□□□ -0.68
TMEM116-214ENST00000551297 WASHC2CQ9Y4E1 1318 aa10.79□□□□□ -0.68
TMEM116-214ENST00000551297 TSPOAP1O95153 1857 aa10.78□□□□□ -0.68
TMEM116-214ENST00000551297 SETBP1Q9Y6X0 1596 aa10.78□□□□□ -0.68
TMEM116-214ENST00000551297 RGL3Q3MIN7 710 aa10.78□□□□□ -0.68
TMEM116-214ENST00000551297 CDCA8Q53HL2 280 aa10.78□□□□□ -0.68
TMEM116-214ENST00000551297 NRXN1Q9ULB1 1477 aa10.77□□□□□ -0.69
TMEM116-214ENST00000551297 RAPGEF3O95398 923 aa10.77□□□□□ -0.69
TMEM116-214ENST00000551297 YEATS2Q9ULM3 1422 aa10.76□□□□□ -0.69
TMEM116-214ENST00000551297 MROH2AA6NES4 1674 aa10.76□□□□□ -0.69
TMEM116-214ENST00000551297 PPLO60437 1756 aa10.76□□□□□ -0.69
TMEM116-214ENST00000551297 GGT6Q6P531 493 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms