RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 DIP2BQ9P265 1576 aa28.14■■■□□ 2.1
SSH1-209ENST00000551165 NBPF8Q3BBV2 869 aa28.13■■■□□ 2.09
SSH1-209ENST00000551165 KDM5CP41229 1560 aa28.13■■■□□ 2.09
SSH1-209ENST00000551165 DHX29Q7Z478 1369 aaKnown RBP28.12■■■□□ 2.09
SSH1-209ENST00000551165 KIF3BO15066 747 aa28.1■■■□□ 2.09
SSH1-209ENST00000551165 PLA2R1Q13018 1463 aa28.1■■■□□ 2.09
SSH1-209ENST00000551165 DEPDC5O75140 1603 aa28.06■■■□□ 2.08
SSH1-209ENST00000551165 MLH3Q9UHC1 1453 aa28.06■■■□□ 2.08
SSH1-209ENST00000551165 TSPOAP1O95153 1857 aa28.05■■■□□ 2.08
SSH1-209ENST00000551165 HECW2Q9P2P5 1572 aa28.04■■■□□ 2.08
SSH1-209ENST00000551165 MIER1Q8N108 512 aa28.04■■■□□ 2.08
SSH1-209ENST00000551165 A2MP01023 1474 aa28.02■■■□□ 2.08
SSH1-209ENST00000551165 MROH1Q8NDA8 1641 aa28.01■■■□□ 2.07
SSH1-209ENST00000551165 FRMPD1Q5SYB0 1578 aa28■■■□□ 2.07
SSH1-209ENST00000551165 ABCA6Q8N139 1617 aa28■■■□□ 2.07
SSH1-209ENST00000551165 RICTORQ6R327 1708 aa28■■■□□ 2.07
SSH1-209ENST00000551165 EIF2AK4Q9P2K8 1649 aaKnown RBP28■■■□□ 2.07
SSH1-209ENST00000551165 PPRC1Q5VV67 1664 aaKnown RBP28■■■□□ 2.07
SSH1-209ENST00000551165 CCDC144AA2RUR9 1427 aa27.99■■■□□ 2.07
SSH1-209ENST00000551165 E9PCH4 1651 aa27.99■■■□□ 2.07
SSH1-209ENST00000551165 ZNF326Q5BKZ1 582 aaKnown RBP27.98■■■□□ 2.07
SSH1-209ENST00000551165 VWDEQ8N2E2 1590 aa27.97■■■□□ 2.07
SSH1-209ENST00000551165 PRDM15P57071 1507 aaPredicted RBP27.95■■■□□ 2.07
SSH1-209ENST00000551165 HSPA5P11021 654 aaKnown RBP27.95■■■□□ 2.06
SSH1-209ENST00000551165 KDM2AQ9Y2K7 1162 aa27.94■■■□□ 2.06
SSH1-209ENST00000551165 KANK1Q14678 1352 aa27.93■■■□□ 2.06
SSH1-209ENST00000551165 KIF13AQ9H1H9 1805 aa27.92■■■□□ 2.06
SSH1-209ENST00000551165 ATP10AO60312 1499 aa27.92■■■□□ 2.06
SSH1-209ENST00000551165 YEATS2Q9ULM3 1422 aa27.92■■■□□ 2.06
SSH1-209ENST00000551165 RGL3Q3MIN7 710 aa27.92■■■□□ 2.06
SSH1-209ENST00000551165 DCAF11Q8TEB1 546 aa27.92■■■□□ 2.06
SSH1-209ENST00000551165 DIP2CQ9Y2E4 1556 aa27.91■■■□□ 2.06
SSH1-209ENST00000551165 TET3O43151 1660 aa27.91■■■□□ 2.06
SSH1-209ENST00000551165 DDX10Q13206 875 aaKnown RBP27.91■■■□□ 2.06
SSH1-209ENST00000551165 GGT6Q6P531 493 aa27.89■■■□□ 2.06
SSH1-209ENST00000551165 EIF4G2P78344 907 aaKnown RBP eCLIP27.87■■■□□ 2.053e-7■■■■■ 36.1
SSH1-209ENST00000551165 RNF17Q9BXT8 1623 aaKnown RBP27.87■■■□□ 2.05
SSH1-209ENST00000551165 UHRF1BP1Q6BDS2 1440 aa27.85■■■□□ 2.05
SSH1-209ENST00000551165 CEP152O94986 1710 aa27.84■■■□□ 2.05
SSH1-209ENST00000551165 PTPRTO14522 1441 aa27.84■■■□□ 2.05
SSH1-209ENST00000551165 SPHKAPQ2M3C7 1700 aa27.83■■■□□ 2.05
SSH1-209ENST00000551165 TRPM2O94759 1503 aa27.81■■■□□ 2.04
SSH1-209ENST00000551165 EFCAB6Q5THR3 1501 aa27.8■■■□□ 2.04
SSH1-209ENST00000551165 COL17A1Q9UMD9 1497 aaPredicted RBP27.79■■■□□ 2.04
SSH1-209ENST00000551165 BCORL1Q5H9F3 1711 aa27.79■■■□□ 2.04
SSH1-209ENST00000551165 CLTCL1P53675 1640 aa27.79■■■□□ 2.04
SSH1-209ENST00000551165 SPATA31E1Q6ZUB1 1445 aa27.79■■■□□ 2.04
SSH1-209ENST00000551165 ZMYM4Q5VZL5 1548 aa27.78■■■□□ 2.04
SSH1-209ENST00000551165 C11orf95C9JLR9 678 aaPredicted RBP27.77■■■□□ 2.04
SSH1-209ENST00000551165 LMTK2Q8IWU2 1503 aa27.77■■■□□ 2.04
SSH1-209ENST00000551165 UGGT1Q9NYU2 1555 aa27.76■■■□□ 2.03
SSH1-209ENST00000551165 WASHC2AQ641Q2 1341 aa27.76■■■□□ 2.03
SSH1-209ENST00000551165 RALGAPBQ86X10 1494 aa27.75■■■□□ 2.03
SSH1-209ENST00000551165 WASHC2CQ9Y4E1 1318 aa27.74■■■□□ 2.03
SSH1-209ENST00000551165 PRAG1Q86YV5 1406 aa27.73■■■□□ 2.03
SSH1-209ENST00000551165 ABCC3O15438 1527 aa27.72■■■□□ 2.03
SSH1-209ENST00000551165 NPATQ14207 1427 aa27.71■■■□□ 2.03
SSH1-209ENST00000551165 CFAP65Q6ZU64 1925 aaKnown RBP27.71■■■□□ 2.03
SSH1-209ENST00000551165 USP47Q96K76 1375 aa27.7■■■□□ 2.03
SSH1-209ENST00000551165 CARD11Q9BXL7 1154 aa27.69■■■□□ 2.02
SSH1-209ENST00000551165 NBPF1Q3BBV0 1214 aa27.67■■■□□ 2.02
SSH1-209ENST00000551165 TRPM1Q7Z4N2 1603 aa27.66■■■□□ 2.02
SSH1-209ENST00000551165 ROCK2O75116 1388 aaKnown RBP27.64■■■□□ 2.02
SSH1-209ENST00000551165 CAMSAP1Q5T5Y3 1602 aa27.63■■■□□ 2.01
SSH1-209ENST00000551165 SIGLEC1Q9BZZ2 1709 aa27.63■■■□□ 2.01
SSH1-209ENST00000551165 CCDC7Q96M83 1385 aa27.61■■■□□ 2.01
SSH1-209ENST00000551165 YTHDC1Q96MU7 727 aaKnown RBP27.61■■■□□ 2.01
SSH1-209ENST00000551165 KIF7Q2M1P5 1343 aa27.59■■■□□ 2.01
SSH1-209ENST00000551165 MROH2AA6NES4 1674 aa27.56■■■□□ 2
SSH1-209ENST00000551165 ST20-MTHFSA0A0A6YYL1 179 aa27.56■■■□□ 2
SSH1-209ENST00000551165 MADDQ8WXG6 1647 aa27.55■■■□□ 2
SSH1-209ENST00000551165 KIF1BO60333 1816 aa27.54■■■□□ 2
SSH1-209ENST00000551165 REREQ9P2R6 1566 aa27.53■■■□□ 2
SSH1-209ENST00000551165 CHGAP10645 457 aaKnown RBP27.53■■■□□ 2
SSH1-209ENST00000551165 GPRASP1Q5JY77 1395 aa27.52■■■□□ 2
SSH1-209ENST00000551165 NOS1P29475 1434 aa27.52■■■□□ 2
SSH1-209ENST00000551165 CNTLNQ9NXG0 1405 aa27.52■■■□□ 2
SSH1-209ENST00000551165 ZC3H13Q5T200 1668 aaKnown RBP27.52■■■□□ 2
SSH1-209ENST00000551165 ARHGEF40Q8TER5 1519 aa27.51■■■□□ 2
SSH1-209ENST00000551165 MLECQ14165 292 aa27.51■■□□□ 1.99
SSH1-209ENST00000551165 SYNMO15061 1565 aa27.51■■□□□ 1.99
SSH1-209ENST00000551165 AGLP35573 1532 aa27.5■■□□□ 1.99
SSH1-209ENST00000551165 POLR1AO95602 1720 aaPredicted RBP27.5■■□□□ 1.99
SSH1-209ENST00000551165 NEURL4Q96JN8 1562 aa27.5■■□□□ 1.99
SSH1-209ENST00000551165 ARHGAP31Q2M1Z3 1444 aa27.49■■□□□ 1.99
SSH1-209ENST00000551165 ADGRB3O60242 1522 aa27.48■■□□□ 1.99
SSH1-209ENST00000551165 TRHP20396 242 aaPredicted RBP27.48■■□□□ 1.99
SSH1-209ENST00000551165 ADGRF5Q8IZF2 1346 aa27.47■■□□□ 1.99
SSH1-209ENST00000551165 POLR3GLQ9BT43 218 aa27.47■■□□□ 1.99
SSH1-209ENST00000551165 ANP32CO43423 234 aa27.45■■□□□ 1.99
SSH1-209ENST00000551165 FBXO31Q5XUX0 539 aaPredicted RBP27.45■■□□□ 1.99
SSH1-209ENST00000551165 IFT172Q9UG01 1749 aa27.43■■□□□ 1.98
SSH1-209ENST00000551165 LAMC1P11047 1609 aa27.43■■□□□ 1.98
SSH1-209ENST00000551165 PIK3C2BO00750 1634 aa27.43■■□□□ 1.98
SSH1-209ENST00000551165 IDI1Q13907 227 aa27.42■■□□□ 1.98
SSH1-209ENST00000551165 STAC3Q96MF2 364 aa27.42■■□□□ 1.98
SSH1-209ENST00000551165 CLTCQ00610 1675 aaKnown RBP27.4■■□□□ 1.98
SSH1-209ENST00000551165 PREX1Q8TCU6 1659 aa27.4■■□□□ 1.98
SSH1-209ENST00000551165 MYOM2P54296 1465 aa27.4■■□□□ 1.98
SSH1-209ENST00000551165 CFAP70Q5T0N1 1121 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms