RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TCOF1Q13428 1488 aaKnown RBP18.4■□□□□ 0.54
PRPF40B-212ENST00000551111 PLA2R1Q13018 1463 aa18.39■□□□□ 0.53
PRPF40B-212ENST00000551111 A2ML1A8K2U0 1454 aa18.38■□□□□ 0.53
PRPF40B-212ENST00000551111 KDM5DQ9BY66 1539 aa18.38■□□□□ 0.53
PRPF40B-212ENST00000551111 RSPH4AQ5TD94 716 aa18.37■□□□□ 0.53
PRPF40B-212ENST00000551111 POLR1AO95602 1720 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-212ENST00000551111 PZPP20742 1482 aa18.35■□□□□ 0.53
PRPF40B-212ENST00000551111 WASHC2CQ9Y4E1 1318 aa18.35■□□□□ 0.53
PRPF40B-212ENST00000551111 PKD2Q13563 968 aa18.35■□□□□ 0.53
PRPF40B-212ENST00000551111 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
PRPF40B-212ENST00000551111 TNRQ92752 1358 aa18.34■□□□□ 0.53
PRPF40B-212ENST00000551111 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
PRPF40B-212ENST00000551111 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
PRPF40B-212ENST00000551111 RNF17Q9BXT8 1623 aaKnown RBP18.34■□□□□ 0.53
PRPF40B-212ENST00000551111 NEURL4Q96JN8 1562 aa18.34■□□□□ 0.53
PRPF40B-212ENST00000551111 MAP3K1Q13233 1512 aa18.33■□□□□ 0.53
PRPF40B-212ENST00000551111 CEP152O94986 1710 aa18.33■□□□□ 0.52
PRPF40B-212ENST00000551111 MROH1Q8NDA8 1641 aa18.32■□□□□ 0.52
PRPF40B-212ENST00000551111 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
PRPF40B-212ENST00000551111 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
PRPF40B-212ENST00000551111 ABCC3O15438 1527 aa18.29■□□□□ 0.52
PRPF40B-212ENST00000551111 FAM135AQ9P2D6 1515 aa18.29■□□□□ 0.52
PRPF40B-212ENST00000551111 MIA2Q96PC5 1412 aa18.29■□□□□ 0.52
PRPF40B-212ENST00000551111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.29■□□□□ 0.52
PRPF40B-212ENST00000551111 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
PRPF40B-212ENST00000551111 ILDR2Q71H61 639 aa18.27■□□□□ 0.52
PRPF40B-212ENST00000551111 CROCC2H7BZ55 1655 aa18.27■□□□□ 0.52
PRPF40B-212ENST00000551111 DISP3Q9P2K9 1392 aa18.26■□□□□ 0.51
PRPF40B-212ENST00000551111 ZC3H13Q5T200 1668 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-212ENST00000551111 PTPN23Q9H3S7 1636 aa18.25■□□□□ 0.51
PRPF40B-212ENST00000551111 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
PRPF40B-212ENST00000551111 UBAP1LF5GYI3 381 aa18.24■□□□□ 0.51
PRPF40B-212ENST00000551111 SPATA31D1Q6ZQQ2 1576 aa18.24■□□□□ 0.51
PRPF40B-212ENST00000551111 ABCC5O15440 1437 aa18.23■□□□□ 0.51
PRPF40B-212ENST00000551111 STRCP1A6NGW2 1772 aa18.23■□□□□ 0.51
PRPF40B-212ENST00000551111 NLRP1Q9C000 1473 aa18.22■□□□□ 0.51
PRPF40B-212ENST00000551111 DUOX2Q9NRD8 1548 aa18.22■□□□□ 0.51
PRPF40B-212ENST00000551111 VWDEQ8N2E2 1590 aa18.21■□□□□ 0.51
PRPF40B-212ENST00000551111 ERVK-7P63135 1459 aa18.21■□□□□ 0.51
PRPF40B-212ENST00000551111 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
PRPF40B-212ENST00000551111 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
PRPF40B-212ENST00000551111 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
PRPF40B-212ENST00000551111 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
PRPF40B-212ENST00000551111 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
PRPF40B-212ENST00000551111 SHANK2Q9UPX8 1470 aa18.2■□□□□ 0.5
PRPF40B-212ENST00000551111 IQGAP1P46940 1657 aa18.18■□□□□ 0.5
PRPF40B-212ENST00000551111 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
PRPF40B-212ENST00000551111 NPHP4O75161 1426 aaPredicted RBP18.17■□□□□ 0.5
PRPF40B-212ENST00000551111 DAPK1P53355 1430 aa18.17■□□□□ 0.5
PRPF40B-212ENST00000551111 MED14O60244 1454 aa18.17■□□□□ 0.5
PRPF40B-212ENST00000551111 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
PRPF40B-212ENST00000551111 CHIC2Q9UKJ5 165 aa18.16■□□□□ 0.5
PRPF40B-212ENST00000551111 PRDM15P57071 1507 aaPredicted RBP18.16■□□□□ 0.5
PRPF40B-212ENST00000551111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.5
PRPF40B-212ENST00000551111 ALKQ9UM73 1620 aa18.15■□□□□ 0.5
PRPF40B-212ENST00000551111 CPS1P31327 1500 aa18.14■□□□□ 0.49
PRPF40B-212ENST00000551111 APLP2Q06481 763 aa18.14■□□□□ 0.49
PRPF40B-212ENST00000551111 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
PRPF40B-212ENST00000551111 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
PRPF40B-212ENST00000551111 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
PRPF40B-212ENST00000551111 LTKP29376 864 aa18.11■□□□□ 0.49
PRPF40B-212ENST00000551111 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
PRPF40B-212ENST00000551111 HSPA1LP34931 641 aa18.1■□□□□ 0.49
PRPF40B-212ENST00000551111 ARHGAP31Q2M1Z3 1444 aa18.09■□□□□ 0.49
PRPF40B-212ENST00000551111 XIRP1Q702N8 1843 aaKnown RBP18.09■□□□□ 0.49
PRPF40B-212ENST00000551111 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
PRPF40B-212ENST00000551111 LRRC7Q96NW7 1537 aa18.07■□□□□ 0.48
PRPF40B-212ENST00000551111 SLIT1O75093 1534 aa18.06■□□□□ 0.48
PRPF40B-212ENST00000551111 SCAF11Q99590 1463 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-212ENST00000551111 SYNMO15061 1565 aa18.05■□□□□ 0.48
PRPF40B-212ENST00000551111 TXNDC2Q86VQ3 553 aa18.05■□□□□ 0.48
PRPF40B-212ENST00000551111 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
PRPF40B-212ENST00000551111 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
PRPF40B-212ENST00000551111 SOCS7O14512 581 aa18.04■□□□□ 0.48
PRPF40B-212ENST00000551111 TOM1O60784 492 aa18.04■□□□□ 0.48
PRPF40B-212ENST00000551111 LMTK2Q8IWU2 1503 aa18.03■□□□□ 0.48
PRPF40B-212ENST00000551111 IDI1Q13907 227 aa18.02■□□□□ 0.48
PRPF40B-212ENST00000551111 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
PRPF40B-212ENST00000551111 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
PRPF40B-212ENST00000551111 ADGRL2O95490 1459 aa18.01■□□□□ 0.47
PRPF40B-212ENST00000551111 KANK1Q14678 1352 aa18.01■□□□□ 0.47
PRPF40B-212ENST00000551111 EFCAB6Q5THR3 1501 aa18■□□□□ 0.47
PRPF40B-212ENST00000551111 TMEM2Q9UHN6 1383 aa17.99■□□□□ 0.47
PRPF40B-212ENST00000551111 MED1Q15648 1581 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-212ENST00000551111 KDM5AP29375 1690 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-212ENST00000551111 NOS1P29475 1434 aa17.98■□□□□ 0.47
PRPF40B-212ENST00000551111 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
PRPF40B-212ENST00000551111 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
PRPF40B-212ENST00000551111 TET3O43151 1660 aa17.95■□□□□ 0.46
PRPF40B-212ENST00000551111 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
PRPF40B-212ENST00000551111 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
PRPF40B-212ENST00000551111 ADGRB3O60242 1522 aa17.93■□□□□ 0.46
PRPF40B-212ENST00000551111 PPARGC1BQ86YN6 1023 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-212ENST00000551111 RBM33Q96EV2 1170 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-212ENST00000551111 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
PRPF40B-212ENST00000551111 E9PCH4 1651 aa17.9■□□□□ 0.46
PRPF40B-212ENST00000551111 UNC13BO14795 1591 aa17.9■□□□□ 0.46
PRPF40B-212ENST00000551111 TMEM131LA2VDJ0 1609 aa17.89■□□□□ 0.45
PRPF40B-212ENST00000551111 CHD2O14647 1828 aaKnown RBP17.87■□□□□ 0.45
PRPF40B-212ENST00000551111 RPRD2Q5VT52 1461 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms