RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
CPNE8-207ENST00000550863 LTBP4Q8N2S1 1624 aa18.2■□□□□ 0.5
CPNE8-207ENST00000550863 EIF2AK4Q9P2K8 1649 aaKnown RBP18.2■□□□□ 0.5
CPNE8-207ENST00000550863 ZC3H13Q5T200 1668 aaKnown RBP18.18■□□□□ 0.5
CPNE8-207ENST00000550863 KIF3BO15066 747 aa18.18■□□□□ 0.5
CPNE8-207ENST00000550863 CERKQ8TCT0 537 aa18.18■□□□□ 0.5
CPNE8-207ENST00000550863 PTPRTO14522 1441 aa18.16■□□□□ 0.5
CPNE8-207ENST00000550863 PZPP20742 1482 aa18.15■□□□□ 0.5
CPNE8-207ENST00000550863 ABCC3O15438 1527 aa18.15■□□□□ 0.5
CPNE8-207ENST00000550863 NEURL4Q96JN8 1562 aa18.15■□□□□ 0.5
CPNE8-207ENST00000550863 MIA2Q96PC5 1412 aa18.15■□□□□ 0.5
CPNE8-207ENST00000550863 FAM135AQ9P2D6 1515 aa18.14■□□□□ 0.49
CPNE8-207ENST00000550863 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.49
CPNE8-207ENST00000550863 NCKAP5LQ9HCH0 1330 aa18.14■□□□□ 0.49
CPNE8-207ENST00000550863 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.49
CPNE8-207ENST00000550863 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.49
CPNE8-207ENST00000550863 PLA2R1Q13018 1463 aa18.12■□□□□ 0.49
CPNE8-207ENST00000550863 ABCC5O15440 1437 aa18.1■□□□□ 0.49
CPNE8-207ENST00000550863 FGD6Q6ZV73 1430 aa18.1■□□□□ 0.49
CPNE8-207ENST00000550863 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
CPNE8-207ENST00000550863 PRDM15P57071 1507 aaPredicted RBP18.09■□□□□ 0.49
CPNE8-207ENST00000550863 DUOX2Q9NRD8 1548 aa18.09■□□□□ 0.49
CPNE8-207ENST00000550863 SHANK2Q9UPX8 1470 aa18.09■□□□□ 0.49
CPNE8-207ENST00000550863 TNRQ92752 1358 aa18.09■□□□□ 0.49
CPNE8-207ENST00000550863 DAPK1P53355 1430 aa18.08■□□□□ 0.49
CPNE8-207ENST00000550863 TSPY4P0CV99 314 aa18.08■□□□□ 0.48
CPNE8-207ENST00000550863 TSPY10P0CW01 314 aa18.08■□□□□ 0.48
CPNE8-207ENST00000550863 SPATA31D1Q6ZQQ2 1576 aa18.08■□□□□ 0.48
CPNE8-207ENST00000550863 WASHC2CQ9Y4E1 1318 aa18.07■□□□□ 0.48
CPNE8-207ENST00000550863 RSPH4AQ5TD94 716 aa18.07■□□□□ 0.48
CPNE8-207ENST00000550863 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
CPNE8-207ENST00000550863 ZNF335Q9H4Z2 1342 aaPredicted RBP18.06■□□□□ 0.48
CPNE8-207ENST00000550863 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
CPNE8-207ENST00000550863 UBR1Q8IWV7 1749 aa18.05■□□□□ 0.48
CPNE8-207ENST00000550863 ERVK-7P63135 1459 aa18.05■□□□□ 0.48
CPNE8-207ENST00000550863 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
CPNE8-207ENST00000550863 UGGT1Q9NYU2 1555 aa18.04■□□□□ 0.48
CPNE8-207ENST00000550863 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.48
CPNE8-207ENST00000550863 IQGAP1P46940 1657 aa18.02■□□□□ 0.47
CPNE8-207ENST00000550863 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.02■□□□□ 0.47
CPNE8-207ENST00000550863 ERBINQ96RT1 1412 aa18.01■□□□□ 0.47
CPNE8-207ENST00000550863 APLP2Q06481 763 aa18.01■□□□□ 0.47
CPNE8-207ENST00000550863 NLRP1Q9C000 1473 aa18.01■□□□□ 0.47
CPNE8-207ENST00000550863 PIK3C2BO00750 1634 aa17.99■□□□□ 0.47
CPNE8-207ENST00000550863 RRP7BPQ9NSQ0 103 aa17.99■□□□□ 0.47
CPNE8-207ENST00000550863 VWDEQ8N2E2 1590 aa17.99■□□□□ 0.47
CPNE8-207ENST00000550863 CHIC2Q9UKJ5 165 aa17.98■□□□□ 0.47
CPNE8-207ENST00000550863 IQSEC2Q5JU85 1478 aa17.96■□□□□ 0.47
CPNE8-207ENST00000550863 PKD2Q13563 968 aa17.96■□□□□ 0.47
CPNE8-207ENST00000550863 SYNMO15061 1565 aa17.95■□□□□ 0.46
CPNE8-207ENST00000550863 MYO5BQ9ULV0 1848 aa17.94■□□□□ 0.46
CPNE8-207ENST00000550863 ADGRL2O95490 1459 aa17.93■□□□□ 0.46
CPNE8-207ENST00000550863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.46
CPNE8-207ENST00000550863 EFCAB6Q5THR3 1501 aa17.92■□□□□ 0.46
CPNE8-207ENST00000550863 NPHP4O75161 1426 aaPredicted RBP17.91■□□□□ 0.46
CPNE8-207ENST00000550863 MED14O60244 1454 aa17.9■□□□□ 0.46
CPNE8-207ENST00000550863 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
CPNE8-207ENST00000550863 XIRP1Q702N8 1843 aaKnown RBP17.89■□□□□ 0.45
CPNE8-207ENST00000550863 LMTK2Q8IWU2 1503 aa17.89■□□□□ 0.45
CPNE8-207ENST00000550863 FAM50AQ14320 339 aaKnown RBP17.89■□□□□ 0.45
CPNE8-207ENST00000550863 ALKQ9UM73 1620 aa17.89■□□□□ 0.45
CPNE8-207ENST00000550863 ARHGAP31Q2M1Z3 1444 aa17.89■□□□□ 0.45
CPNE8-207ENST00000550863 UNC13BO14795 1591 aa17.88■□□□□ 0.45
CPNE8-207ENST00000550863 GCC2Q8IWJ2 1684 aa17.88■□□□□ 0.45
CPNE8-207ENST00000550863 PPARGC1BQ86YN6 1023 aaKnown RBP17.87■□□□□ 0.45
CPNE8-207ENST00000550863 CPS1P31327 1500 aa17.87■□□□□ 0.45
CPNE8-207ENST00000550863 TET3O43151 1660 aa17.86■□□□□ 0.45
CPNE8-207ENST00000550863 SLIT1O75093 1534 aa17.85■□□□□ 0.45
CPNE8-207ENST00000550863 ARHGAP23Q9P227 1491 aa17.85■□□□□ 0.45
CPNE8-207ENST00000550863 E9PCH4 1651 aa17.84■□□□□ 0.45
CPNE8-207ENST00000550863 KDM5AP29375 1690 aaKnown RBP17.84■□□□□ 0.45
CPNE8-207ENST00000550863 SCAF11Q99590 1463 aaKnown RBP17.84■□□□□ 0.45
CPNE8-207ENST00000550863 ANKLE2Q86XL3 938 aa17.84■□□□□ 0.45
CPNE8-207ENST00000550863 THEMISQ8N1K5 641 aaPredicted RBP17.84■□□□□ 0.45
CPNE8-207ENST00000550863 ADGRB3O60242 1522 aa17.82■□□□□ 0.44
CPNE8-207ENST00000550863 KANK1Q14678 1352 aa17.82■□□□□ 0.44
CPNE8-207ENST00000550863 UBAP1LF5GYI3 381 aa17.82■□□□□ 0.44
CPNE8-207ENST00000550863 ANKRD50Q9ULJ7 1429 aa17.81■□□□□ 0.44
CPNE8-207ENST00000550863 IQGAP3Q86VI3 1631 aa17.8■□□□□ 0.44
CPNE8-207ENST00000550863 LRRC7Q96NW7 1537 aa17.79■□□□□ 0.44
CPNE8-207ENST00000550863 LTKP29376 864 aa17.79■□□□□ 0.44
CPNE8-207ENST00000550863 NOS1P29475 1434 aa17.79■□□□□ 0.44
CPNE8-207ENST00000550863 DISP3Q9P2K9 1392 aa17.78■□□□□ 0.44
CPNE8-207ENST00000550863 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
CPNE8-207ENST00000550863 PIP4K2BP78356 416 aa17.75■□□□□ 0.43
CPNE8-207ENST00000550863 TMEM131LA2VDJ0 1609 aa17.75■□□□□ 0.43
CPNE8-207ENST00000550863 ITGAEP38570 1179 aa17.74■□□□□ 0.43
CPNE8-207ENST00000550863 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
CPNE8-207ENST00000550863 TMEM2Q9UHN6 1383 aa17.74■□□□□ 0.43
CPNE8-207ENST00000550863 IDI1Q13907 227 aa17.73■□□□□ 0.43
CPNE8-207ENST00000550863 ILDR2Q71H61 639 aa17.73■□□□□ 0.43
CPNE8-207ENST00000550863 RPRD2Q5VT52 1461 aaKnown RBP17.71■□□□□ 0.43
CPNE8-207ENST00000550863 TXNDC2Q86VQ3 553 aa17.71■□□□□ 0.43
CPNE8-207ENST00000550863 SPHKAPQ2M3C7 1700 aa17.71■□□□□ 0.43
CPNE8-207ENST00000550863 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
CPNE8-207ENST00000550863 NWD1Q149M9 1564 aa17.69■□□□□ 0.42
CPNE8-207ENST00000550863 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
CPNE8-207ENST00000550863 HSPA1LP34931 641 aa17.68■□□□□ 0.42
CPNE8-207ENST00000550863 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
CPNE8-207ENST00000550863 ZFYVE9O95405 1425 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms