RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 LAPTM4BQ86VI4 370 aa9.97□□□□□ -0.81
TSPAN8-205ENST00000550818 DNAJC5Q9H3Z4 198 aa9.97□□□□□ -0.81
TSPAN8-205ENST00000550818 KCNC4Q03721 635 aa9.96□□□□□ -0.82
TSPAN8-205ENST00000550818 ZFRQ96KR1 1074 aaKnown RBP9.95□□□□□ -0.82
TSPAN8-205ENST00000550818 KIAA1468Q9P260 1216 aa9.94□□□□□ -0.82
TSPAN8-205ENST00000550818 MAP3K9P80192 1104 aa9.93□□□□□ -0.82
TSPAN8-205ENST00000550818 LAPTM4AQ15012 233 aa9.92□□□□□ -0.82
TSPAN8-205ENST00000550818 EMILIN3Q9NT22 766 aa9.92□□□□□ -0.82
TSPAN8-205ENST00000550818 RYDENQ9NUL5 291 aaKnown RBP9.92□□□□□ -0.82
TSPAN8-205ENST00000550818 LARP6Q9BRS8 491 aaKnown RBP9.91□□□□□ -0.82
TSPAN8-205ENST00000550818 TRAF7Q6Q0C0 670 aa9.9□□□□□ -0.82
TSPAN8-205ENST00000550818 FBXW7Q969H0 707 aa9.9□□□□□ -0.82
TSPAN8-205ENST00000550818 DDX27Q96GQ7 796 aaKnown RBP9.9□□□□□ -0.82
TSPAN8-205ENST00000550818 SEPT9Q9UHD8 586 aaPredicted RBP9.9□□□□□ -0.82
TSPAN8-205ENST00000550818 GFRA3O60609 400 aa9.89□□□□□ -0.83
TSPAN8-205ENST00000550818 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
TSPAN8-205ENST00000550818 ONECUT3O60422 494 aaPredicted RBP9.88□□□□□ -0.83
TSPAN8-205ENST00000550818 MFSD10Q14728 455 aa9.88□□□□□ -0.83
TSPAN8-205ENST00000550818 PHF14O94880 888 aa9.87□□□□□ -0.83
TSPAN8-205ENST00000550818 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
TSPAN8-205ENST00000550818 FAM98CQ17RN3 349 aaKnown RBP9.84□□□□□ -0.83
TSPAN8-205ENST00000550818 C6orf132Q5T0Z8 1188 aa9.84□□□□□ -0.83
TSPAN8-205ENST00000550818 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
TSPAN8-205ENST00000550818 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
TSPAN8-205ENST00000550818 TRIM6-TRIM34B2RNG4 842 aa9.82□□□□□ -0.84
TSPAN8-205ENST00000550818 GTPBP6O43824 516 aaPredicted RBP9.81□□□□□ -0.84
TSPAN8-205ENST00000550818 LRCH3Q96II8 777 aa9.81□□□□□ -0.84
TSPAN8-205ENST00000550818 NRG2O14511 850 aaPredicted RBP9.79□□□□□ -0.84
TSPAN8-205ENST00000550818 PRKD2Q9BZL6 878 aa9.79□□□□□ -0.84
TSPAN8-205ENST00000550818 TJAP1Q5JTD0 557 aa9.78□□□□□ -0.84
TSPAN8-205ENST00000550818 EPAS1Q99814 870 aa9.78□□□□□ -0.84
TSPAN8-205ENST00000550818 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
TSPAN8-205ENST00000550818 PPP4CP60510 307 aa9.73□□□□□ -0.85
TSPAN8-205ENST00000550818 TSKSQ9UJT2 592 aa9.73□□□□□ -0.85
TSPAN8-205ENST00000550818 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
TSPAN8-205ENST00000550818 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
TSPAN8-205ENST00000550818 CADPS2Q86UW7 1296 aa9.72□□□□□ -0.85
TSPAN8-205ENST00000550818 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
TSPAN8-205ENST00000550818 ZNF787Q6DD87 383 aa9.71□□□□□ -0.86
TSPAN8-205ENST00000550818 DPYSL4O14531 572 aa9.7□□□□□ -0.86
TSPAN8-205ENST00000550818 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
TSPAN8-205ENST00000550818 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
TSPAN8-205ENST00000550818 MTRQ99707 1265 aa9.7□□□□□ -0.86
TSPAN8-205ENST00000550818 DDX12PQ92771 950 aa9.68□□□□□ -0.86
TSPAN8-205ENST00000550818 TSR1Q2NL82 804 aaKnown RBP9.67□□□□□ -0.86
TSPAN8-205ENST00000550818 SAMD7Q7Z3H4 446 aa9.67□□□□□ -0.86
TSPAN8-205ENST00000550818 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
TSPAN8-205ENST00000550818 ZNF775Q96BV0 537 aaPredicted RBP9.67□□□□□ -0.86
TSPAN8-205ENST00000550818 IL21Q9HBE4 155 aa9.67□□□□□ -0.86
TSPAN8-205ENST00000550818 PDZRN3Q9UPQ7 1066 aa9.66□□□□□ -0.86
TSPAN8-205ENST00000550818 SMAPO00193 183 aa9.65□□□□□ -0.86
TSPAN8-205ENST00000550818 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
TSPAN8-205ENST00000550818 C3orf80F5H4A9 247 aa9.64□□□□□ -0.87
TSPAN8-205ENST00000550818 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
TSPAN8-205ENST00000550818 FAM198AQ9UFP1 575 aa9.64□□□□□ -0.87
TSPAN8-205ENST00000550818 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
TSPAN8-205ENST00000550818 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
TSPAN8-205ENST00000550818 MAP3K7O43318 606 aa9.61□□□□□ -0.87
TSPAN8-205ENST00000550818 NBR1Q14596 966 aa9.61□□□□□ -0.87
TSPAN8-205ENST00000550818 APLP1P51693 650 aa9.59□□□□□ -0.87
TSPAN8-205ENST00000550818 PRSS12P56730 875 aa9.59□□□□□ -0.87
TSPAN8-205ENST00000550818 TATDN2Q93075 761 aa9.57□□□□□ -0.88
TSPAN8-205ENST00000550818 PRIM1P49642 420 aaKnown RBP9.55□□□□□ -0.88
TSPAN8-205ENST00000550818 TRIM67Q6ZTA4 783 aa9.55□□□□□ -0.88
TSPAN8-205ENST00000550818 PDIA6Q15084 440 aa9.54□□□□□ -0.88
TSPAN8-205ENST00000550818 PNMA3Q9UL41 463 aa9.54□□□□□ -0.88
TSPAN8-205ENST00000550818 NBPF26B4DH59 902 aa9.52□□□□□ -0.89
TSPAN8-205ENST00000550818 POTECB2RU33 542 aa9.51□□□□□ -0.89
TSPAN8-205ENST00000550818 RNF40O75150 1001 aa9.51□□□□□ -0.89
TSPAN8-205ENST00000550818 GGCXP38435 758 aa9.51□□□□□ -0.89
TSPAN8-205ENST00000550818 COPS2P61201 443 aa9.51□□□□□ -0.89
TSPAN8-205ENST00000550818 CERKQ8TCT0 537 aa9.51□□□□□ -0.89
TSPAN8-205ENST00000550818 TMUB1Q9BVT8 246 aa9.51□□□□□ -0.89
TSPAN8-205ENST00000550818 EMID1Q96A84 441 aaPredicted RBP9.5□□□□□ -0.89
TSPAN8-205ENST00000550818 DCAF8L2P0C7V8 631 aa9.49□□□□□ -0.89
TSPAN8-205ENST00000550818 MYT1Q01538 1121 aa9.49□□□□□ -0.89
TSPAN8-205ENST00000550818 NUDT18Q6ZVK8 323 aa9.49□□□□□ -0.89
TSPAN8-205ENST00000550818 HDGFP51858 240 aaKnown RBP9.47□□□□□ -0.89
TSPAN8-205ENST00000550818 SPDYE16A6NNV3 312 aaPredicted RBP9.46□□□□□ -0.9
TSPAN8-205ENST00000550818 ZPR1O75312 459 aa9.46□□□□□ -0.9
TSPAN8-205ENST00000550818 RNF223E7ERA6 249 aa9.45□□□□□ -0.9
TSPAN8-205ENST00000550818 SLC19A1P41440 591 aa9.45□□□□□ -0.9
TSPAN8-205ENST00000550818 PKDCCQ504Y2 493 aa9.45□□□□□ -0.9
TSPAN8-205ENST00000550818 CDHR5Q9HBB8 845 aa9.45□□□□□ -0.9
TSPAN8-205ENST00000550818 DGAT1O75907 488 aa9.44□□□□□ -0.9
TSPAN8-205ENST00000550818 SWT1Q5T5J6 900 aaKnown RBP9.44□□□□□ -0.9
TSPAN8-205ENST00000550818 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
TSPAN8-205ENST00000550818 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
TSPAN8-205ENST00000550818 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
TSPAN8-205ENST00000550818 PRR20EP86478 221 aa9.42□□□□□ -0.9
TSPAN8-205ENST00000550818 PRR20CP86479 221 aa9.42□□□□□ -0.9
TSPAN8-205ENST00000550818 PRR20DP86480 221 aa9.42□□□□□ -0.9
TSPAN8-205ENST00000550818 PRR20BP86481 221 aa9.42□□□□□ -0.9
TSPAN8-205ENST00000550818 PRR20AP86496 221 aa9.42□□□□□ -0.9
TSPAN8-205ENST00000550818 SPRYD7Q5W111 196 aa9.42□□□□□ -0.9
TSPAN8-205ENST00000550818 SLF2Q8IX21 1173 aa9.42□□□□□ -0.9
TSPAN8-205ENST00000550818 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
TSPAN8-205ENST00000550818 GRXCR2A6NFK2 248 aa9.41□□□□□ -0.9
TSPAN8-205ENST00000550818 PLCB2Q00722 1185 aa9.41□□□□□ -0.9
TSPAN8-205ENST00000550818 OSBPP22059 807 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms