RNA–Protein interactions for RNA: ENST00000550762.1

PMEL-217, Transcript of premelanosome protein, humanhuman

TSL 1 (best)

Gene PMEL, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-217ENST00000550762 ABCC5O15440 1437 aa20.16■□□□□ 0.82
PMEL-217ENST00000550762 TCOF1Q13428 1488 aaKnown RBP20.16■□□□□ 0.82
PMEL-217ENST00000550762 PTPRTO14522 1441 aa20.15■□□□□ 0.82
PMEL-217ENST00000550762 NCOA1Q15788 1441 aa20.15■□□□□ 0.82
PMEL-217ENST00000550762 STRCQ7RTU9 1775 aa20.14■□□□□ 0.81
PMEL-217ENST00000550762 DUOX2Q9NRD8 1548 aa20.14■□□□□ 0.81
PMEL-217ENST00000550762 PZPP20742 1482 aa20.14■□□□□ 0.81
PMEL-217ENST00000550762 DAPK1P53355 1430 aa20.13■□□□□ 0.81
PMEL-217ENST00000550762 MYO3AQ8NEV4 1616 aa20.13■□□□□ 0.81
PMEL-217ENST00000550762 EIF2AK4Q9P2K8 1649 aaKnown RBP20.13■□□□□ 0.81
PMEL-217ENST00000550762 KIF15Q9NS87 1388 aa20.12■□□□□ 0.81
PMEL-217ENST00000550762 CAMSAP1Q5T5Y3 1602 aa20.12■□□□□ 0.81
PMEL-217ENST00000550762 RNF17Q9BXT8 1623 aaKnown RBP20.12■□□□□ 0.81
PMEL-217ENST00000550762 CEP170BQ9Y4F5 1589 aaPredicted RBP20.12■□□□□ 0.81
PMEL-217ENST00000550762 TNRQ92752 1358 aa20.11■□□□□ 0.81
PMEL-217ENST00000550762 CERKQ8TCT0 537 aa20.11■□□□□ 0.81
PMEL-217ENST00000550762 ZNF142P52746 1687 aaPredicted RBP20.1■□□□□ 0.81
PMEL-217ENST00000550762 FBXO31Q5XUX0 539 aaPredicted RBP20.1■□□□□ 0.81
PMEL-217ENST00000550762 RRP7BPQ9NSQ0 103 aa20.1■□□□□ 0.81
PMEL-217ENST00000550762 A2ML1A8K2U0 1454 aa20.1■□□□□ 0.81
PMEL-217ENST00000550762 PLA2R1Q13018 1463 aa20.1■□□□□ 0.81
PMEL-217ENST00000550762 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
PMEL-217ENST00000550762 PKD2Q13563 968 aa20.09■□□□□ 0.81
PMEL-217ENST00000550762 ERBINQ96RT1 1412 aa20.09■□□□□ 0.81
PMEL-217ENST00000550762 CROCC2H7BZ55 1655 aa20.08■□□□□ 0.81
PMEL-217ENST00000550762 ANKRD30AQ9BXX3 1397 aa20.08■□□□□ 0.8
PMEL-217ENST00000550762 ABCC3O15438 1527 aa20.07■□□□□ 0.8
PMEL-217ENST00000550762 ZC3H13Q5T200 1668 aaKnown RBP20.06■□□□□ 0.8
PMEL-217ENST00000550762 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
PMEL-217ENST00000550762 NCKAP5LQ9HCH0 1330 aa20.04■□□□□ 0.8
PMEL-217ENST00000550762 CHIC2Q9UKJ5 165 aa20.04■□□□□ 0.8
PMEL-217ENST00000550762 NLRP1Q9C000 1473 aa20.04■□□□□ 0.8
PMEL-217ENST00000550762 MROH1Q8NDA8 1641 aa20.02■□□□□ 0.8
PMEL-217ENST00000550762 KANK1Q14678 1352 aa20■□□□□ 0.79
PMEL-217ENST00000550762 THEMISQ8N1K5 641 aaPredicted RBP20■□□□□ 0.79
PMEL-217ENST00000550762 PRDM15P57071 1507 aaPredicted RBP20■□□□□ 0.79
PMEL-217ENST00000550762 ADGRL2O95490 1459 aa19.99■□□□□ 0.79
PMEL-217ENST00000550762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.98■□□□□ 0.79
PMEL-217ENST00000550762 SPATA31D1Q6ZQQ2 1576 aa19.98■□□□□ 0.79
PMEL-217ENST00000550762 ERVK-7P63135 1459 aa19.98■□□□□ 0.79
PMEL-217ENST00000550762 ARHGAP31Q2M1Z3 1444 aa19.97■□□□□ 0.79
PMEL-217ENST00000550762 ANKLE2Q86XL3 938 aa19.96■□□□□ 0.79
PMEL-217ENST00000550762 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
PMEL-217ENST00000550762 DEPDC5O75140 1603 aa19.94■□□□□ 0.78
PMEL-217ENST00000550762 LTBP4Q8N2S1 1624 aa19.94■□□□□ 0.78
PMEL-217ENST00000550762 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.94■□□□□ 0.78
PMEL-217ENST00000550762 CEP152O94986 1710 aa19.93■□□□□ 0.78
PMEL-217ENST00000550762 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
PMEL-217ENST00000550762 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
PMEL-217ENST00000550762 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
PMEL-217ENST00000550762 LMTK2Q8IWU2 1503 aa19.9■□□□□ 0.78
PMEL-217ENST00000550762 VWDEQ8N2E2 1590 aa19.88■□□□□ 0.77
PMEL-217ENST00000550762 ROCK1Q13464 1354 aa19.87■□□□□ 0.77
PMEL-217ENST00000550762 POLR1AO95602 1720 aaPredicted RBP19.87■□□□□ 0.77
PMEL-217ENST00000550762 NEURL4Q96JN8 1562 aa19.87■□□□□ 0.77
PMEL-217ENST00000550762 PPARGC1BQ86YN6 1023 aaKnown RBP19.86■□□□□ 0.77
PMEL-217ENST00000550762 MED14O60244 1454 aa19.86■□□□□ 0.77
PMEL-217ENST00000550762 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
PMEL-217ENST00000550762 STAG3Q9UJ98 1225 aa19.82■□□□□ 0.76
PMEL-217ENST00000550762 EFCAB6Q5THR3 1501 aa19.81■□□□□ 0.76
PMEL-217ENST00000550762 RPRD2Q5VT52 1461 aaKnown RBP19.8■□□□□ 0.76
PMEL-217ENST00000550762 ITGAEP38570 1179 aa19.8■□□□□ 0.76
PMEL-217ENST00000550762 UBR1Q8IWV7 1749 aa19.79■□□□□ 0.76
PMEL-217ENST00000550762 NOS1P29475 1434 aa19.79■□□□□ 0.76
PMEL-217ENST00000550762 CFAP65Q6ZU64 1925 aaKnown RBP19.79■□□□□ 0.76
PMEL-217ENST00000550762 EID1Q9Y6B2 187 aa19.79■□□□□ 0.76
PMEL-217ENST00000550762 CPS1P31327 1500 aa19.79■□□□□ 0.76
PMEL-217ENST00000550762 SCAF11Q99590 1463 aaKnown RBP19.79■□□□□ 0.76
PMEL-217ENST00000550762 IDI1Q13907 227 aa19.78■□□□□ 0.76
PMEL-217ENST00000550762 TXNDC2Q86VQ3 553 aa19.78■□□□□ 0.76
PMEL-217ENST00000550762 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
PMEL-217ENST00000550762 ARHGAP23Q9P227 1491 aa19.78■□□□□ 0.76
PMEL-217ENST00000550762 SLIT1O75093 1534 aa19.77■□□□□ 0.76
PMEL-217ENST00000550762 IQGAP1P46940 1657 aa19.76■□□□□ 0.75
PMEL-217ENST00000550762 TMEM2Q9UHN6 1383 aa19.76■□□□□ 0.75
PMEL-217ENST00000550762 UNC13BO14795 1591 aa19.75■□□□□ 0.75
PMEL-217ENST00000550762 UBAP1LF5GYI3 381 aa19.75■□□□□ 0.75
PMEL-217ENST00000550762 PIK3C2BO00750 1634 aa19.75■□□□□ 0.75
PMEL-217ENST00000550762 LTKP29376 864 aa19.74■□□□□ 0.75
PMEL-217ENST00000550762 RRBP1Q9P2E9 1410 aaKnown RBP19.74■□□□□ 0.75
PMEL-217ENST00000550762 SYNMO15061 1565 aa19.74■□□□□ 0.75
PMEL-217ENST00000550762 TET3O43151 1660 aa19.73■□□□□ 0.75
PMEL-217ENST00000550762 KDM5AP29375 1690 aaKnown RBP19.72■□□□□ 0.75
PMEL-217ENST00000550762 NUP155O75694 1391 aa19.7■□□□□ 0.74
PMEL-217ENST00000550762 ADGRB3O60242 1522 aa19.69■□□□□ 0.74
PMEL-217ENST00000550762 TOM1O60784 492 aa19.68■□□□□ 0.74
PMEL-217ENST00000550762 GCC2Q8IWJ2 1684 aa19.68■□□□□ 0.74
PMEL-217ENST00000550762 IQGAP3Q86VI3 1631 aa19.67■□□□□ 0.74
PMEL-217ENST00000550762 HDGFP51858 240 aaKnown RBP19.66■□□□□ 0.74
PMEL-217ENST00000550762 LRRC7Q96NW7 1537 aa19.62■□□□□ 0.73
PMEL-217ENST00000550762 E9PCH4 1651 aa19.62■□□□□ 0.73
PMEL-217ENST00000550762 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
PMEL-217ENST00000550762 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
PMEL-217ENST00000550762 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
PMEL-217ENST00000550762 BCANQ96GW7 911 aa19.6■□□□□ 0.73
PMEL-217ENST00000550762 NAIPQ13075 1403 aa19.59■□□□□ 0.73
PMEL-217ENST00000550762 PIP4K2BP78356 416 aa19.59■□□□□ 0.73
PMEL-217ENST00000550762 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.59■□□□□ 0.73
PMEL-217ENST00000550762 ZFYVE9O95405 1425 aa19.59■□□□□ 0.73
PMEL-217ENST00000550762 RIMS2Q9UQ26 1411 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms