RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 GABBR2O75899 941 aa14.37□□□□□ -0.11
ATP2B1-207ENST00000550716 FBXO41Q8TF61 875 aa14.37□□□□□ -0.11
ATP2B1-207ENST00000550716 C9orf84Q5VXU9 1444 aa14.37□□□□□ -0.11
ATP2B1-207ENST00000550716 ATP10AO60312 1499 aa14.37□□□□□ -0.11
ATP2B1-207ENST00000550716 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
ATP2B1-207ENST00000550716 ARHGEF12Q9NZN5 1544 aa14.36□□□□□ -0.11
ATP2B1-207ENST00000550716 AFAP1Q8N556 730 aa14.35□□□□□ -0.11
ATP2B1-207ENST00000550716 KDM5CP41229 1560 aa14.34□□□□□ -0.11
ATP2B1-207ENST00000550716 FER1L4A9Z1Z3 1794 aa14.34□□□□□ -0.11
ATP2B1-207ENST00000550716 ZNF518AQ6AHZ1 1483 aa14.34□□□□□ -0.11
ATP2B1-207ENST00000550716 CDK11AQ9UQ88 783 aaPredicted RBP14.34□□□□□ -0.11
ATP2B1-207ENST00000550716 DIP2CQ9Y2E4 1556 aa14.33□□□□□ -0.12
ATP2B1-207ENST00000550716 CLIP1P30622 1438 aa14.32□□□□□ -0.12
ATP2B1-207ENST00000550716 CASKIN1Q8WXD9 1431 aa14.32□□□□□ -0.12
ATP2B1-207ENST00000550716 CEBPAP49715 358 aaPredicted RBP14.32□□□□□ -0.12
ATP2B1-207ENST00000550716 DCAF8Q5TAQ9 597 aa14.32□□□□□ -0.12
ATP2B1-207ENST00000550716 TRAPPC8Q9Y2L5 1435 aa14.32□□□□□ -0.12
ATP2B1-207ENST00000550716 ABCA6Q8N139 1617 aa14.3□□□□□ -0.12
ATP2B1-207ENST00000550716 CDC42BPBQ9Y5S2 1711 aa14.3□□□□□ -0.12
ATP2B1-207ENST00000550716 ABCC1P33527 1531 aa14.3□□□□□ -0.12
ATP2B1-207ENST00000550716 PREX2Q70Z35 1606 aa14.3□□□□□ -0.12
ATP2B1-207ENST00000550716 CLCN6P51797 869 aa14.28□□□□□ -0.12
ATP2B1-207ENST00000550716 CCDC18Q5T9S5 1454 aa14.28□□□□□ -0.12
ATP2B1-207ENST00000550716 MLH3Q9UHC1 1453 aa14.27□□□□□ -0.12
ATP2B1-207ENST00000550716 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
ATP2B1-207ENST00000550716 GSE1Q14687 1217 aa14.26□□□□□ -0.13
ATP2B1-207ENST00000550716 REREQ9P2R6 1566 aa14.26□□□□□ -0.13
ATP2B1-207ENST00000550716 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
ATP2B1-207ENST00000550716 MYT1LQ9UL68 1186 aa14.25□□□□□ -0.13
ATP2B1-207ENST00000550716 ITSN2Q9NZM3 1697 aa14.25□□□□□ -0.13
ATP2B1-207ENST00000550716 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
ATP2B1-207ENST00000550716 PREX1Q8TCU6 1659 aa14.23□□□□□ -0.13
ATP2B1-207ENST00000550716 KIF12Q96FN5 646 aa14.23□□□□□ -0.13
ATP2B1-207ENST00000550716 MS4A3Q96HJ5 214 aa14.23□□□□□ -0.13
ATP2B1-207ENST00000550716 CDC42BPAQ5VT25 1732 aa14.23□□□□□ -0.13
ATP2B1-207ENST00000550716 SAMD9LQ8IVG5 1584 aa14.22□□□□□ -0.13
ATP2B1-207ENST00000550716 AGLP35573 1532 aa14.22□□□□□ -0.13
ATP2B1-207ENST00000550716 KIDINS220Q9ULH0 1771 aa14.22□□□□□ -0.13
ATP2B1-207ENST00000550716 SYCP2Q9BX26 1530 aa14.2□□□□□ -0.14
ATP2B1-207ENST00000550716 GPATCH8Q9UKJ3 1502 aaKnown RBP14.2□□□□□ -0.14
ATP2B1-207ENST00000550716 MAP3K13O43283 966 aa14.2□□□□□ -0.14
ATP2B1-207ENST00000550716 PYGBP11216 843 aa14.2□□□□□ -0.14
ATP2B1-207ENST00000550716 CERKQ8TCT0 537 aa14.2□□□□□ -0.14
ATP2B1-207ENST00000550716 ZNF777Q9ULD5 760 aaPredicted RBP14.2□□□□□ -0.14
ATP2B1-207ENST00000550716 UHRF1BP1Q6BDS2 1440 aa14.2□□□□□ -0.14
ATP2B1-207ENST00000550716 C3P01024 1663 aa14.19□□□□□ -0.14
ATP2B1-207ENST00000550716 STRCQ7RTU9 1775 aa14.19□□□□□ -0.14
ATP2B1-207ENST00000550716 HNRNPMP52272 730 aaKnown RBP eCLIP14.17□□□□□ -0.14
ATP2B1-207ENST00000550716 PCDHB13Q9Y5F0 798 aa14.16□□□□□ -0.14
ATP2B1-207ENST00000550716 SPAG9O60271 1321 aaKnown RBP14.14□□□□□ -0.15
ATP2B1-207ENST00000550716 INO80Q9ULG1 1556 aaPredicted RBP14.13□□□□□ -0.15
ATP2B1-207ENST00000550716 DCBLD2Q96PD2 775 aa14.13□□□□□ -0.15
ATP2B1-207ENST00000550716 ATP7AQ04656 1500 aa14.13□□□□□ -0.15
ATP2B1-207ENST00000550716 KIAA1107Q9UPP5 1409 aa14.12□□□□□ -0.15
ATP2B1-207ENST00000550716 PLXNC1O60486 1568 aa14.12□□□□□ -0.15
ATP2B1-207ENST00000550716 ZNF644Q9H582 1327 aaPredicted RBP14.12□□□□□ -0.15
ATP2B1-207ENST00000550716 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
ATP2B1-207ENST00000550716 TIAM1Q13009 1591 aa14.11□□□□□ -0.15
ATP2B1-207ENST00000550716 ESF1Q9H501 851 aaKnown RBP14.11□□□□□ -0.15
ATP2B1-207ENST00000550716 CNTLNQ9NXG0 1405 aa14.11□□□□□ -0.15
ATP2B1-207ENST00000550716 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
ATP2B1-207ENST00000550716 MTUS2Q5JR59 1369 aa14.1□□□□□ -0.15
ATP2B1-207ENST00000550716 NCOA1Q15788 1441 aa14.1□□□□□ -0.15
ATP2B1-207ENST00000550716 SUPT6HQ7KZ85 1726 aaKnown RBP14.1□□□□□ -0.15
ATP2B1-207ENST00000550716 PTPRTO14522 1441 aa14.09□□□□□ -0.15
ATP2B1-207ENST00000550716 SGIP1Q9BQI5 828 aa14.09□□□□□ -0.15
ATP2B1-207ENST00000550716 A2MP01023 1474 aa14.09□□□□□ -0.15
ATP2B1-207ENST00000550716 PLEKHH2Q8IVE3 1493 aa14.09□□□□□ -0.15
ATP2B1-207ENST00000550716 ZMYM3Q14202 1370 aa14.09□□□□□ -0.15
ATP2B1-207ENST00000550716 IFNL1Q8IU54 200 aa14.08□□□□□ -0.16
ATP2B1-207ENST00000550716 LTBP4Q8N2S1 1624 aa14.08□□□□□ -0.16
ATP2B1-207ENST00000550716 NPATQ14207 1427 aa14.07□□□□□ -0.16
ATP2B1-207ENST00000550716 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
ATP2B1-207ENST00000550716 EHBP1L1Q8N3D4 1523 aa14.07□□□□□ -0.16
ATP2B1-207ENST00000550716 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
ATP2B1-207ENST00000550716 SETD1BQ9UPS6 1966 aaKnown RBP14.07□□□□□ -0.16
ATP2B1-207ENST00000550716 MROH2AA6NES4 1674 aa14.07□□□□□ -0.16
ATP2B1-207ENST00000550716 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
ATP2B1-207ENST00000550716 CAMSAP1Q5T5Y3 1602 aa14.06□□□□□ -0.16
ATP2B1-207ENST00000550716 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
ATP2B1-207ENST00000550716 CLTCQ00610 1675 aaKnown RBP14.06□□□□□ -0.16
ATP2B1-207ENST00000550716 PTPRKQ15262 1439 aa14.05□□□□□ -0.16
ATP2B1-207ENST00000550716 GGT6Q6P531 493 aa14.04□□□□□ -0.16
ATP2B1-207ENST00000550716 MYO3AQ8NEV4 1616 aa14.04□□□□□ -0.16
ATP2B1-207ENST00000550716 CHRM1P11229 460 aaPredicted RBP14.03□□□□□ -0.16
ATP2B1-207ENST00000550716 NCKAP5LQ9HCH0 1330 aa14.03□□□□□ -0.16
ATP2B1-207ENST00000550716 PCDHB8Q9UN66 801 aa14.02□□□□□ -0.17
ATP2B1-207ENST00000550716 NCOA2Q15596 1464 aa14.01□□□□□ -0.17
ATP2B1-207ENST00000550716 CEP170BQ9Y4F5 1589 aaPredicted RBP14□□□□□ -0.17
ATP2B1-207ENST00000550716 ZNF142P52746 1687 aaPredicted RBP14□□□□□ -0.17
ATP2B1-207ENST00000550716 ADGBQ8N7X0 1667 aa14□□□□□ -0.17
ATP2B1-207ENST00000550716 CAMSAP2Q08AD1 1489 aa13.99□□□□□ -0.17
ATP2B1-207ENST00000550716 ZNF335Q9H4Z2 1342 aaPredicted RBP13.99□□□□□ -0.17
ATP2B1-207ENST00000550716 ZNF467Q7Z7K2 595 aaPredicted RBP13.99□□□□□ -0.17
ATP2B1-207ENST00000550716 TCOF1Q13428 1488 aaKnown RBP13.99□□□□□ -0.17
ATP2B1-207ENST00000550716 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
ATP2B1-207ENST00000550716 DHX29Q7Z478 1369 aaKnown RBP13.98□□□□□ -0.17
ATP2B1-207ENST00000550716 TIE1P35590 1138 aa13.98□□□□□ -0.17
ATP2B1-207ENST00000550716 BMP2KQ9NSY1 1161 aaPredicted RBP13.98□□□□□ -0.17
ATP2B1-207ENST00000550716 CCDC141Q6ZP82 1450 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms