RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 TCOF1Q13428 1488 aaKnown RBP22.53■■□□□ 1.2
TPCN1-213ENST00000550543 ARHGEF5Q12774 1597 aa22.52■■□□□ 1.2
TPCN1-213ENST00000550543 WASHC2CQ9Y4E1 1318 aa22.52■■□□□ 1.2
TPCN1-213ENST00000550543 KDM5DQ9BY66 1539 aa22.52■■□□□ 1.19
TPCN1-213ENST00000550543 TNRQ92752 1358 aa22.5■■□□□ 1.19
TPCN1-213ENST00000550543 PZPP20742 1482 aa22.49■■□□□ 1.19
TPCN1-213ENST00000550543 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
TPCN1-213ENST00000550543 MAP3K1Q13233 1512 aa22.48■■□□□ 1.19
TPCN1-213ENST00000550543 THEMISQ8N1K5 641 aaPredicted RBP22.45■■□□□ 1.18
TPCN1-213ENST00000550543 DISP3Q9P2K9 1392 aa22.45■■□□□ 1.18
TPCN1-213ENST00000550543 MIA2Q96PC5 1412 aa22.44■■□□□ 1.18
TPCN1-213ENST00000550543 NLRP1Q9C000 1473 aa22.44■■□□□ 1.18
TPCN1-213ENST00000550543 ZNF335Q9H4Z2 1342 aaPredicted RBP22.44■■□□□ 1.18
TPCN1-213ENST00000550543 DNMT1P26358 1616 aaKnown RBP22.42■■□□□ 1.18
TPCN1-213ENST00000550543 UBAP1LF5GYI3 381 aa22.41■■□□□ 1.18
TPCN1-213ENST00000550543 ANKLE2Q86XL3 938 aa22.41■■□□□ 1.18
TPCN1-213ENST00000550543 APLP2Q06481 763 aa22.4■■□□□ 1.18
TPCN1-213ENST00000550543 MYOM3Q5VTT5 1437 aa22.4■■□□□ 1.18
TPCN1-213ENST00000550543 MAST1Q9Y2H9 1570 aa22.39■■□□□ 1.18
TPCN1-213ENST00000550543 FBXO31Q5XUX0 539 aaPredicted RBP22.38■■□□□ 1.17
TPCN1-213ENST00000550543 CPS1P31327 1500 aa22.36■■□□□ 1.17
TPCN1-213ENST00000550543 ZC3H13Q5T200 1668 aaKnown RBP22.35■■□□□ 1.17
TPCN1-213ENST00000550543 RNF17Q9BXT8 1623 aaKnown RBP22.35■■□□□ 1.17
TPCN1-213ENST00000550543 EIF2AK4Q9P2K8 1649 aaKnown RBP22.35■■□□□ 1.17
TPCN1-213ENST00000550543 UGGT1Q9NYU2 1555 aa22.33■■□□□ 1.17
TPCN1-213ENST00000550543 DUOX2Q9NRD8 1548 aa22.31■■□□□ 1.16
TPCN1-213ENST00000550543 SPATA31D1Q6ZQQ2 1576 aa22.31■■□□□ 1.16
TPCN1-213ENST00000550543 LOC105371045A0A1W2PR82 267 aa22.31■■□□□ 1.16
TPCN1-213ENST00000550543 TOM1O60784 492 aa22.31■■□□□ 1.16
TPCN1-213ENST00000550543 POLR1AO95602 1720 aaPredicted RBP22.31■■□□□ 1.16
TPCN1-213ENST00000550543 ABCC3O15438 1527 aa22.31■■□□□ 1.16
TPCN1-213ENST00000550543 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
TPCN1-213ENST00000550543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.3■■□□□ 1.16
TPCN1-213ENST00000550543 MED14O60244 1454 aa22.29■■□□□ 1.16
TPCN1-213ENST00000550543 KANK4Q5T7N3 995 aaPredicted RBP22.29■■□□□ 1.16
TPCN1-213ENST00000550543 DEPDC5O75140 1603 aa22.28■■□□□ 1.16
TPCN1-213ENST00000550543 NPHP4O75161 1426 aaPredicted RBP22.28■■□□□ 1.16
TPCN1-213ENST00000550543 NEURL4Q96JN8 1562 aa22.26■■□□□ 1.15
TPCN1-213ENST00000550543 ERBINQ96RT1 1412 aa22.26■■□□□ 1.15
TPCN1-213ENST00000550543 SOCS7O14512 581 aa22.25■■□□□ 1.15
TPCN1-213ENST00000550543 ERVK-7P63135 1459 aa22.25■■□□□ 1.15
TPCN1-213ENST00000550543 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
TPCN1-213ENST00000550543 KANK1Q14678 1352 aa22.24■■□□□ 1.15
TPCN1-213ENST00000550543 ARHGAP31Q2M1Z3 1444 aa22.23■■□□□ 1.15
TPCN1-213ENST00000550543 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
TPCN1-213ENST00000550543 PRDM15P57071 1507 aaPredicted RBP22.18■■□□□ 1.14
TPCN1-213ENST00000550543 ABCC5O15440 1437 aa22.18■■□□□ 1.14
TPCN1-213ENST00000550543 ANKRD30AQ9BXX3 1397 aa22.18■■□□□ 1.14
TPCN1-213ENST00000550543 ILDR2Q71H61 639 aa22.18■■□□□ 1.14
TPCN1-213ENST00000550543 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
TPCN1-213ENST00000550543 VWDEQ8N2E2 1590 aa22.17■■□□□ 1.14
TPCN1-213ENST00000550543 EID1Q9Y6B2 187 aa22.17■■□□□ 1.14
TPCN1-213ENST00000550543 IQGAP1P46940 1657 aa22.17■■□□□ 1.14
TPCN1-213ENST00000550543 PTPN23Q9H3S7 1636 aa22.17■■□□□ 1.14
TPCN1-213ENST00000550543 RRP7BPQ9NSQ0 103 aa22.16■■□□□ 1.14
TPCN1-213ENST00000550543 DAPK1P53355 1430 aa22.15■■□□□ 1.14
TPCN1-213ENST00000550543 FGD6Q6ZV73 1430 aa22.15■■□□□ 1.14
TPCN1-213ENST00000550543 PIP4K2BP78356 416 aa22.15■■□□□ 1.14
TPCN1-213ENST00000550543 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
TPCN1-213ENST00000550543 CROCC2H7BZ55 1655 aa22.12■■□□□ 1.13
TPCN1-213ENST00000550543 STAG3Q9UJ98 1225 aa22.12■■□□□ 1.13
TPCN1-213ENST00000550543 TXNDC2Q86VQ3 553 aa22.11■■□□□ 1.13
TPCN1-213ENST00000550543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.11■■□□□ 1.136e-12■■□□□ 13
TPCN1-213ENST00000550543 SYNMO15061 1565 aa22.11■■□□□ 1.13
TPCN1-213ENST00000550543 SLIT1O75093 1534 aa22.11■■□□□ 1.13
TPCN1-213ENST00000550543 CEP152O94986 1710 aa22.1■■□□□ 1.13
TPCN1-213ENST00000550543 HSPA1LP34931 641 aa22.1■■□□□ 1.13
TPCN1-213ENST00000550543 ARHGAP23Q9P227 1491 aa22.09■■□□□ 1.13
TPCN1-213ENST00000550543 UBR1Q8IWV7 1749 aa22.08■■□□□ 1.12
TPCN1-213ENST00000550543 LMTK2Q8IWU2 1503 aa22.07■■□□□ 1.12
TPCN1-213ENST00000550543 LRRC7Q96NW7 1537 aa22.06■■□□□ 1.12
TPCN1-213ENST00000550543 TMEM2Q9UHN6 1383 aa22.05■■□□□ 1.12
TPCN1-213ENST00000550543 SLC52A1Q9NWF4 448 aa22.03■■□□□ 1.12
TPCN1-213ENST00000550543 KDM5AP29375 1690 aaKnown RBP22.03■■□□□ 1.12
TPCN1-213ENST00000550543 LTKP29376 864 aa22.02■■□□□ 1.12
TPCN1-213ENST00000550543 CHIC2Q9UKJ5 165 aa22.02■■□□□ 1.12
TPCN1-213ENST00000550543 ADGRL2O95490 1459 aa22.02■■□□□ 1.12
TPCN1-213ENST00000550543 EFCAB6Q5THR3 1501 aa22.01■■□□□ 1.11
TPCN1-213ENST00000550543 RPRD2Q5VT52 1461 aaKnown RBP21.99■■□□□ 1.11
TPCN1-213ENST00000550543 HDGFP51858 240 aaKnown RBP21.99■■□□□ 1.11
TPCN1-213ENST00000550543 FAM50AQ14320 339 aaKnown RBP21.98■■□□□ 1.11
TPCN1-213ENST00000550543 PHF23Q9BUL5 403 aaPredicted RBP21.98■■□□□ 1.11
TPCN1-213ENST00000550543 CFAP65Q6ZU64 1925 aaKnown RBP21.98■■□□□ 1.11
TPCN1-213ENST00000550543 MED1Q15648 1581 aaPredicted RBP21.97■■□□□ 1.11
TPCN1-213ENST00000550543 IDI1Q13907 227 aa21.97■■□□□ 1.11
TPCN1-213ENST00000550543 NOS1P29475 1434 aa21.97■■□□□ 1.11
TPCN1-213ENST00000550543 PIK3C2BO00750 1634 aa21.96■■□□□ 1.11
TPCN1-213ENST00000550543 ANKRD50Q9ULJ7 1429 aa21.96■■□□□ 1.11
TPCN1-213ENST00000550543 KCNA6P17658 529 aa21.93■■□□□ 1.1
TPCN1-213ENST00000550543 ALKQ9UM73 1620 aa21.92■■□□□ 1.1
TPCN1-213ENST00000550543 STRCP1A6NGW2 1772 aa21.92■■□□□ 1.1
TPCN1-213ENST00000550543 ADGRB3O60242 1522 aa21.91■■□□□ 1.1
TPCN1-213ENST00000550543 FAM135BQ49AJ0 1406 aa21.89■■□□□ 1.09
TPCN1-213ENST00000550543 BCANQ96GW7 911 aa21.88■■□□□ 1.09
TPCN1-213ENST00000550543 NKTRP30414 1462 aaKnown RBP21.88■■□□□ 1.09
TPCN1-213ENST00000550543 TMEM94Q12767 1356 aa21.87■■□□□ 1.09
TPCN1-213ENST00000550543 PPP1R15AO75807 674 aaPredicted RBP21.86■■□□□ 1.09
TPCN1-213ENST00000550543 PROSER2Q86WR7 435 aaPredicted RBP21.86■■□□□ 1.09
TPCN1-213ENST00000550543 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.86■■□□□ 1.09
TPCN1-213ENST00000550543 ROCK1Q13464 1354 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms