RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 MYO3AQ8NEV4 1616 aa29.89■■■□□ 2.38
LETMD1-224ENST00000550446 TNRQ92752 1358 aa29.88■■■□□ 2.37
LETMD1-224ENST00000550446 PLA2R1Q13018 1463 aa29.87■■■□□ 2.37
LETMD1-224ENST00000550446 ARHGEF5Q12774 1597 aa29.86■■■□□ 2.37
LETMD1-224ENST00000550446 A2ML1A8K2U0 1454 aa29.85■■■□□ 2.37
LETMD1-224ENST00000550446 TCOF1Q13428 1488 aaKnown RBP29.83■■■□□ 2.37
LETMD1-224ENST00000550446 ZNF142P52746 1687 aaPredicted RBP29.82■■■□□ 2.36
LETMD1-224ENST00000550446 KDM5DQ9BY66 1539 aa29.82■■■□□ 2.36
LETMD1-224ENST00000550446 APLP2Q06481 763 aa29.81■■■□□ 2.36
LETMD1-224ENST00000550446 MAP3K1Q13233 1512 aa29.81■■■□□ 2.36
LETMD1-224ENST00000550446 PZPP20742 1482 aa29.8■■■□□ 2.36
LETMD1-224ENST00000550446 MYOM3Q5VTT5 1437 aa29.79■■■□□ 2.36
LETMD1-224ENST00000550446 MIA2Q96PC5 1412 aa29.78■■■□□ 2.36
LETMD1-224ENST00000550446 IQSEC2Q5JU85 1478 aa29.77■■■□□ 2.36
LETMD1-224ENST00000550446 THEMISQ8N1K5 641 aaPredicted RBP29.77■■■□□ 2.36
LETMD1-224ENST00000550446 DNMT1P26358 1616 aaKnown RBP29.77■■■□□ 2.36
LETMD1-224ENST00000550446 UBAP1LF5GYI3 381 aa29.76■■■□□ 2.35
LETMD1-224ENST00000550446 ANKLE2Q86XL3 938 aa29.75■■■□□ 2.35
LETMD1-224ENST00000550446 FAM135AQ9P2D6 1515 aa29.74■■■□□ 2.35
LETMD1-224ENST00000550446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.73■■■□□ 2.35
LETMD1-224ENST00000550446 DISP3Q9P2K9 1392 aa29.73■■■□□ 2.35
LETMD1-224ENST00000550446 MAST1Q9Y2H9 1570 aa29.69■■■□□ 2.34
LETMD1-224ENST00000550446 RRP7BPQ9NSQ0 103 aa29.69■■■□□ 2.34
LETMD1-224ENST00000550446 NLRP1Q9C000 1473 aa29.67■■■□□ 2.34
LETMD1-224ENST00000550446 ABCC3O15438 1527 aa29.64■■■□□ 2.34
LETMD1-224ENST00000550446 UGGT1Q9NYU2 1555 aa29.62■■■□□ 2.33
LETMD1-224ENST00000550446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.62■■■□□ 2.333e-14■□□□□ 10.9
LETMD1-224ENST00000550446 ABCC5O15440 1437 aa29.62■■■□□ 2.33
LETMD1-224ENST00000550446 RNF17Q9BXT8 1623 aaKnown RBP29.61■■■□□ 2.33
LETMD1-224ENST00000550446 KIF15Q9NS87 1388 aa29.61■■■□□ 2.33
LETMD1-224ENST00000550446 DUOX2Q9NRD8 1548 aa29.6■■■□□ 2.33
LETMD1-224ENST00000550446 ILDR2Q71H61 639 aa29.59■■■□□ 2.33
LETMD1-224ENST00000550446 CHIC2Q9UKJ5 165 aa29.59■■■□□ 2.33
LETMD1-224ENST00000550446 NEURL4Q96JN8 1562 aa29.57■■■□□ 2.32
LETMD1-224ENST00000550446 SHANK2Q9UPX8 1470 aa29.56■■■□□ 2.32
LETMD1-224ENST00000550446 NPHP4O75161 1426 aaPredicted RBP29.56■■■□□ 2.32
LETMD1-224ENST00000550446 SCAF1Q9H7N4 1312 aaKnown RBP29.56■■■□□ 2.32
LETMD1-224ENST00000550446 EIF2AK4Q9P2K8 1649 aaKnown RBP29.56■■■□□ 2.32
LETMD1-224ENST00000550446 PIP4K2BP78356 416 aa29.55■■■□□ 2.32
LETMD1-224ENST00000550446 ERVK-7P63135 1459 aa29.55■■■□□ 2.32
LETMD1-224ENST00000550446 PTPN23Q9H3S7 1636 aa29.53■■■□□ 2.32
LETMD1-224ENST00000550446 TOM1O60784 492 aa29.53■■■□□ 2.32
LETMD1-224ENST00000550446 POLR1AO95602 1720 aaPredicted RBP29.53■■■□□ 2.32
LETMD1-224ENST00000550446 MROH1Q8NDA8 1641 aa29.53■■■□□ 2.32
LETMD1-224ENST00000550446 SPATA31D1Q6ZQQ2 1576 aa29.52■■■□□ 2.32
LETMD1-224ENST00000550446 DAPK1P53355 1430 aa29.52■■■□□ 2.32
LETMD1-224ENST00000550446 FGD6Q6ZV73 1430 aa29.52■■■□□ 2.32
LETMD1-224ENST00000550446 ZC3H13Q5T200 1668 aaKnown RBP29.51■■■□□ 2.31
LETMD1-224ENST00000550446 MED14O60244 1454 aa29.5■■■□□ 2.31
LETMD1-224ENST00000550446 CPS1P31327 1500 aa29.5■■■□□ 2.31
LETMD1-224ENST00000550446 ERBINQ96RT1 1412 aa29.49■■■□□ 2.31
LETMD1-224ENST00000550446 ANKRD30AQ9BXX3 1397 aa29.47■■■□□ 2.31
LETMD1-224ENST00000550446 CFAP65Q6ZU64 1925 aaKnown RBP29.46■■■□□ 2.31
LETMD1-224ENST00000550446 KANK1Q14678 1352 aa29.46■■■□□ 2.31
LETMD1-224ENST00000550446 CEP152O94986 1710 aa29.45■■■□□ 2.31
LETMD1-224ENST00000550446 TXNDC2Q86VQ3 553 aa29.45■■■□□ 2.31
LETMD1-224ENST00000550446 DEPDC5O75140 1603 aa29.45■■■□□ 2.3
LETMD1-224ENST00000550446 FAM50AQ14320 339 aaKnown RBP29.44■■■□□ 2.3
LETMD1-224ENST00000550446 ARHGAP31Q2M1Z3 1444 aa29.44■■■□□ 2.3
LETMD1-224ENST00000550446 VWDEQ8N2E2 1590 aa29.43■■■□□ 2.3
LETMD1-224ENST00000550446 LTKP29376 864 aa29.43■■■□□ 2.3
LETMD1-224ENST00000550446 HSPA1LP34931 641 aa29.43■■■□□ 2.3
LETMD1-224ENST00000550446 STAG3Q9UJ98 1225 aa29.42■■■□□ 2.3
LETMD1-224ENST00000550446 EID1Q9Y6B2 187 aa29.4■■■□□ 2.3
LETMD1-224ENST00000550446 CROCC2H7BZ55 1655 aa29.4■■■□□ 2.3
LETMD1-224ENST00000550446 PRDM15P57071 1507 aaPredicted RBP29.4■■■□□ 2.3
LETMD1-224ENST00000550446 SOCS7O14512 581 aa29.38■■■□□ 2.29
LETMD1-224ENST00000550446 IQGAP1P46940 1657 aa29.37■■■□□ 2.29
LETMD1-224ENST00000550446 SCAF11Q99590 1463 aaKnown RBP29.36■■■□□ 2.29
LETMD1-224ENST00000550446 IDI1Q13907 227 aa29.35■■■□□ 2.29
LETMD1-224ENST00000550446 UBR1Q8IWV7 1749 aa29.34■■■□□ 2.29
LETMD1-224ENST00000550446 SENP3Q9H4L4 574 aaPredicted RBP29.3■■■□□ 2.28
LETMD1-224ENST00000550446 LRRC7Q96NW7 1537 aa29.3■■■□□ 2.28
LETMD1-224ENST00000550446 ARHGAP23Q9P227 1491 aa29.29■■■□□ 2.28
LETMD1-224ENST00000550446 TMEM2Q9UHN6 1383 aa29.28■■■□□ 2.28
LETMD1-224ENST00000550446 SLIT1O75093 1534 aa29.28■■■□□ 2.28
LETMD1-224ENST00000550446 LMTK2Q8IWU2 1503 aa29.25■■■□□ 2.27
LETMD1-224ENST00000550446 STRCP1A6NGW2 1772 aa29.24■■■□□ 2.27
LETMD1-224ENST00000550446 ADGRL2O95490 1459 aa29.23■■■□□ 2.27
LETMD1-224ENST00000550446 PIK3C2BO00750 1634 aa29.23■■■□□ 2.27
LETMD1-224ENST00000550446 ANKRD50Q9ULJ7 1429 aa29.22■■■□□ 2.27
LETMD1-224ENST00000550446 SLC52A1Q9NWF4 448 aa29.22■■■□□ 2.27
LETMD1-224ENST00000550446 SLC26A8Q96RN1 970 aa29.21■■■□□ 2.27
LETMD1-224ENST00000550446 ALKQ9UM73 1620 aa29.2■■■□□ 2.26
LETMD1-224ENST00000550446 BCANQ96GW7 911 aa29.19■■■□□ 2.26
LETMD1-224ENST00000550446 NOS1P29475 1434 aa29.19■■■□□ 2.26
LETMD1-224ENST00000550446 EFCAB6Q5THR3 1501 aa29.18■■■□□ 2.26
LETMD1-224ENST00000550446 SYNMO15061 1565 aa29.14■■■□□ 2.26
LETMD1-224ENST00000550446 KCNA6P17658 529 aa29.14■■■□□ 2.26
LETMD1-224ENST00000550446 PPARGC1BQ86YN6 1023 aaKnown RBP29.14■■■□□ 2.26
LETMD1-224ENST00000550446 ITGAEP38570 1179 aa29.13■■■□□ 2.25
LETMD1-224ENST00000550446 PROSER2Q86WR7 435 aaPredicted RBP29.11■■■□□ 2.25
LETMD1-224ENST00000550446 RBM33Q96EV2 1170 aaKnown RBP29.11■■■□□ 2.25
LETMD1-224ENST00000550446 CHGAP10645 457 aaKnown RBP29.08■■■□□ 2.25
LETMD1-224ENST00000550446 PHF23Q9BUL5 403 aaPredicted RBP29.08■■■□□ 2.25
LETMD1-224ENST00000550446 TMEM94Q12767 1356 aa29.08■■■□□ 2.25
LETMD1-224ENST00000550446 HDGFP51858 240 aaKnown RBP29.07■■■□□ 2.24
LETMD1-224ENST00000550446 MED1Q15648 1581 aaPredicted RBP29.07■■■□□ 2.24
LETMD1-224ENST00000550446 RPRD2Q5VT52 1461 aaKnown RBP29.06■■■□□ 2.24
LETMD1-224ENST00000550446 PPP1R15AO75807 674 aaPredicted RBP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms