RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 KIF15Q9NS87 1388 aa21.06■□□□□ 0.96
CACNB3-216ENST00000550391 SIGLEC1Q9BZZ2 1709 aa21.06■□□□□ 0.96
CACNB3-216ENST00000550391 HRCP23327 699 aa21.04■□□□□ 0.96
CACNB3-216ENST00000550391 DUOX2Q9NRD8 1548 aa21.03■□□□□ 0.96
CACNB3-216ENST00000550391 PREX1Q8TCU6 1659 aa21.02■□□□□ 0.96
CACNB3-216ENST00000550391 STRCQ7RTU9 1775 aa21.02■□□□□ 0.96
CACNB3-216ENST00000550391 PTPRTO14522 1441 aa21.01■□□□□ 0.95
CACNB3-216ENST00000550391 ANKRD50Q9ULJ7 1429 aa21.01■□□□□ 0.95
CACNB3-216ENST00000550391 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
CACNB3-216ENST00000550391 ABCA6Q8N139 1617 aa21■□□□□ 0.95
CACNB3-216ENST00000550391 MYT1LQ9UL68 1186 aa21■□□□□ 0.95
CACNB3-216ENST00000550391 DIP2CQ9Y2E4 1556 aa20.98■□□□□ 0.95
CACNB3-216ENST00000550391 ERBINQ96RT1 1412 aa20.97■□□□□ 0.95
CACNB3-216ENST00000550391 FER1L4A9Z1Z3 1794 aa20.97■□□□□ 0.95
CACNB3-216ENST00000550391 DHX29Q7Z478 1369 aaKnown RBP20.96■□□□□ 0.95
CACNB3-216ENST00000550391 ACIN1Q9UKV3 1341 aaKnown RBP20.95■□□□□ 0.94
CACNB3-216ENST00000550391 A2MP01023 1474 aa20.94■□□□□ 0.94
CACNB3-216ENST00000550391 MLECQ14165 292 aa20.94■□□□□ 0.94
CACNB3-216ENST00000550391 LTBP4Q8N2S1 1624 aa20.93■□□□□ 0.94
CACNB3-216ENST00000550391 EIF2AK4Q9P2K8 1649 aaKnown RBP20.93■□□□□ 0.94
CACNB3-216ENST00000550391 UHRF1BP1Q6BDS2 1440 aa20.93■□□□□ 0.94
CACNB3-216ENST00000550391 SETD1BQ9UPS6 1966 aaKnown RBP20.92■□□□□ 0.94
CACNB3-216ENST00000550391 UNC13BO14795 1591 aa20.89■□□□□ 0.94
CACNB3-216ENST00000550391 REREQ9P2R6 1566 aa20.89■□□□□ 0.94
CACNB3-216ENST00000550391 ATP10AO60312 1499 aa20.89■□□□□ 0.94
CACNB3-216ENST00000550391 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
CACNB3-216ENST00000550391 DEPDC5O75140 1603 aa20.86■□□□□ 0.93
CACNB3-216ENST00000550391 KDM5DQ9BY66 1539 aa20.86■□□□□ 0.93
CACNB3-216ENST00000550391 UBAP1LF5GYI3 381 aa20.85■□□□□ 0.93
CACNB3-216ENST00000550391 CEBPAP49715 358 aaPredicted RBP20.85■□□□□ 0.93
CACNB3-216ENST00000550391 TRIM52Q96A61 297 aa20.85■□□□□ 0.93
CACNB3-216ENST00000550391 RNF17Q9BXT8 1623 aaKnown RBP20.83■□□□□ 0.93
CACNB3-216ENST00000550391 KIF3BO15066 747 aa20.82■□□□□ 0.92
CACNB3-216ENST00000550391 AGLP35573 1532 aa20.82■□□□□ 0.92
CACNB3-216ENST00000550391 MROH1Q8NDA8 1641 aa20.82■□□□□ 0.92
CACNB3-216ENST00000550391 PZPP20742 1482 aa20.81■□□□□ 0.92
CACNB3-216ENST00000550391 CCER1Q8TC90 406 aaPredicted RBP20.81■□□□□ 0.92
CACNB3-216ENST00000550391 NUP155O75694 1391 aa20.81■□□□□ 0.92
CACNB3-216ENST00000550391 PRDM15P57071 1507 aaPredicted RBP20.8■□□□□ 0.92
CACNB3-216ENST00000550391 IQGAP3Q86VI3 1631 aa20.8■□□□□ 0.92
CACNB3-216ENST00000550391 VWDEQ8N2E2 1590 aa20.78■□□□□ 0.92
CACNB3-216ENST00000550391 MPHOSPH9Q99550 1183 aa20.78■□□□□ 0.92
CACNB3-216ENST00000550391 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
CACNB3-216ENST00000550391 MED1Q15648 1581 aaPredicted RBP20.76■□□□□ 0.91
CACNB3-216ENST00000550391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.76■□□□□ 0.91
CACNB3-216ENST00000550391 SLC4A1APQ9BWU0 796 aaKnown RBP20.74■□□□□ 0.91
CACNB3-216ENST00000550391 KANK1Q14678 1352 aa20.72■□□□□ 0.91
CACNB3-216ENST00000550391 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
CACNB3-216ENST00000550391 CLSPNQ9HAW4 1339 aa20.72■□□□□ 0.91
CACNB3-216ENST00000550391 GGT6Q6P531 493 aa20.71■□□□□ 0.91
CACNB3-216ENST00000550391 LMTK2Q8IWU2 1503 aa20.7■□□□□ 0.9
CACNB3-216ENST00000550391 CEP152O94986 1710 aa20.7■□□□□ 0.9
CACNB3-216ENST00000550391 TET3O43151 1660 aa20.69■□□□□ 0.9
CACNB3-216ENST00000550391 ZC3H13Q5T200 1668 aaKnown RBP20.68■□□□□ 0.9
CACNB3-216ENST00000550391 PKD2Q13563 968 aa20.67■□□□□ 0.9
CACNB3-216ENST00000550391 ABCC3O15438 1527 aa20.67■□□□□ 0.9
CACNB3-216ENST00000550391 HSPA1LP34931 641 aa20.66■□□□□ 0.9
CACNB3-216ENST00000550391 C3P01024 1663 aa20.66■□□□□ 0.9
CACNB3-216ENST00000550391 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
CACNB3-216ENST00000550391 E9PCH4 1651 aa20.64■□□□□ 0.9
CACNB3-216ENST00000550391 ZNF335Q9H4Z2 1342 aaPredicted RBP20.64■□□□□ 0.89
CACNB3-216ENST00000550391 FOXD1Q16676 465 aa20.64■□□□□ 0.89
CACNB3-216ENST00000550391 EFCAB6Q5THR3 1501 aa20.63■□□□□ 0.89
CACNB3-216ENST00000550391 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
CACNB3-216ENST00000550391 ESF1Q9H501 851 aaKnown RBP20.63■□□□□ 0.89
CACNB3-216ENST00000550391 CAMSAP1Q5T5Y3 1602 aa20.63■□□□□ 0.89
CACNB3-216ENST00000550391 ANKRD30BQ9BXX2 1392 aa20.61■□□□□ 0.89
CACNB3-216ENST00000550391 CLTCQ00610 1675 aaKnown RBP20.59■□□□□ 0.89
CACNB3-216ENST00000550391 TOM1O60784 492 aa20.59■□□□□ 0.89
CACNB3-216ENST00000550391 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
CACNB3-216ENST00000550391 RPRD2Q5VT52 1461 aaKnown RBP20.57■□□□□ 0.88
CACNB3-216ENST00000550391 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
CACNB3-216ENST00000550391 ARHGAP31Q2M1Z3 1444 aa20.57■□□□□ 0.88
CACNB3-216ENST00000550391 NPATQ14207 1427 aa20.56■□□□□ 0.88
CACNB3-216ENST00000550391 PLA2R1Q13018 1463 aa20.56■□□□□ 0.88
CACNB3-216ENST00000550391 SPHKAPQ2M3C7 1700 aa20.56■□□□□ 0.88
CACNB3-216ENST00000550391 PIP4K2BP78356 416 aa20.55■□□□□ 0.88
CACNB3-216ENST00000550391 SIN3AQ96ST3 1273 aa20.55■□□□□ 0.88
CACNB3-216ENST00000550391 NCKAP5LQ9HCH0 1330 aa20.53■□□□□ 0.88
CACNB3-216ENST00000550391 MROH2AA6NES4 1674 aa20.52■□□□□ 0.88
CACNB3-216ENST00000550391 TRPM2O94759 1503 aa20.52■□□□□ 0.87
CACNB3-216ENST00000550391 CNTLNQ9NXG0 1405 aa20.52■□□□□ 0.87
CACNB3-216ENST00000550391 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
CACNB3-216ENST00000550391 NOS1P29475 1434 aa20.48■□□□□ 0.87
CACNB3-216ENST00000550391 ZMYM3Q14202 1370 aa20.47■□□□□ 0.87
CACNB3-216ENST00000550391 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
CACNB3-216ENST00000550391 CFAP65Q6ZU64 1925 aaKnown RBP20.46■□□□□ 0.87
CACNB3-216ENST00000550391 CLTCL1P53675 1640 aa20.45■□□□□ 0.87
CACNB3-216ENST00000550391 SYNMO15061 1565 aa20.45■□□□□ 0.86
CACNB3-216ENST00000550391 ERVK-7P63135 1459 aa20.44■□□□□ 0.86
CACNB3-216ENST00000550391 TIMELESSQ9UNS1 1208 aa20.43■□□□□ 0.86
CACNB3-216ENST00000550391 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
CACNB3-216ENST00000550391 UGGT1Q9NYU2 1555 aa20.42■□□□□ 0.86
CACNB3-216ENST00000550391 PIK3C2BO00750 1634 aa20.42■□□□□ 0.86
CACNB3-216ENST00000550391 FBXO31Q5XUX0 539 aaPredicted RBP20.41■□□□□ 0.86
CACNB3-216ENST00000550391 CPS1P31327 1500 aa20.41■□□□□ 0.86
CACNB3-216ENST00000550391 TONSLQ96HA7 1378 aa20.4■□□□□ 0.86
CACNB3-216ENST00000550391 MYO3AQ8NEV4 1616 aa20.39■□□□□ 0.86
CACNB3-216ENST00000550391 NEURL4Q96JN8 1562 aa20.37■□□□□ 0.85
CACNB3-216ENST00000550391 KIF1BO60333 1816 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms