RNA–Protein interactions for RNA: ENST00000550380.5

LINC02407-201, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 4

Gene LINC02407, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-201ENST00000550380 ABCA6Q8N139 1617 aa18.31■□□□□ 0.52
LINC02407-201ENST00000550380 DIP2CQ9Y2E4 1556 aa18.3■□□□□ 0.52
LINC02407-201ENST00000550380 PRDM15P57071 1507 aaPredicted RBP18.3■□□□□ 0.52
LINC02407-201ENST00000550380 TIMELESSQ9UNS1 1208 aa18.29■□□□□ 0.52
LINC02407-201ENST00000550380 AGLP35573 1532 aa18.28■□□□□ 0.52
LINC02407-201ENST00000550380 ARHGEF40Q8TER5 1519 aa18.27■□□□□ 0.51
LINC02407-201ENST00000550380 VWDEQ8N2E2 1590 aa18.26■□□□□ 0.51
LINC02407-201ENST00000550380 KANK1Q14678 1352 aa18.25■□□□□ 0.51
LINC02407-201ENST00000550380 ATP10AO60312 1499 aa18.25■□□□□ 0.51
LINC02407-201ENST00000550380 PZPP20742 1482 aa18.25■□□□□ 0.51
LINC02407-201ENST00000550380 RAPGEF3O95398 923 aa18.24■□□□□ 0.51
LINC02407-201ENST00000550380 TRIM52Q96A61 297 aa18.24■□□□□ 0.51
LINC02407-201ENST00000550380 MPHOSPH9Q99550 1183 aa18.24■□□□□ 0.51
LINC02407-201ENST00000550380 NUP155O75694 1391 aa18.24■□□□□ 0.51
LINC02407-201ENST00000550380 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
LINC02407-201ENST00000550380 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
LINC02407-201ENST00000550380 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
LINC02407-201ENST00000550380 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
LINC02407-201ENST00000550380 TET3O43151 1660 aa18.22■□□□□ 0.51
LINC02407-201ENST00000550380 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
LINC02407-201ENST00000550380 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
LINC02407-201ENST00000550380 MROH1Q8NDA8 1641 aa18.2■□□□□ 0.5
LINC02407-201ENST00000550380 RPRD2Q5VT52 1461 aaKnown RBP18.18■□□□□ 0.5
LINC02407-201ENST00000550380 COL17A1Q9UMD9 1497 aaPredicted RBP18.18■□□□□ 0.5
LINC02407-201ENST00000550380 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
LINC02407-201ENST00000550380 ANKRD30BQ9BXX2 1392 aa18.15■□□□□ 0.5
LINC02407-201ENST00000550380 KIF3BO15066 747 aa18.13■□□□□ 0.49
LINC02407-201ENST00000550380 EFCAB6Q5THR3 1501 aa18.13■□□□□ 0.49
LINC02407-201ENST00000550380 ARHGAP31Q2M1Z3 1444 aa18.11■□□□□ 0.49
LINC02407-201ENST00000550380 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
LINC02407-201ENST00000550380 E9PCH4 1651 aa18.09■□□□□ 0.49
LINC02407-201ENST00000550380 PKD2Q13563 968 aa18.09■□□□□ 0.49
LINC02407-201ENST00000550380 ABCC3O15438 1527 aa18.08■□□□□ 0.49
LINC02407-201ENST00000550380 SPHKAPQ2M3C7 1700 aa18.08■□□□□ 0.48
LINC02407-201ENST00000550380 TRPM2O94759 1503 aa18.08■□□□□ 0.48
LINC02407-201ENST00000550380 PTPRTO14522 1441 aa18.07■□□□□ 0.48
LINC02407-201ENST00000550380 CAMSAP1Q5T5Y3 1602 aa18.06■□□□□ 0.48
LINC02407-201ENST00000550380 CEP152O94986 1710 aa18.05■□□□□ 0.48
LINC02407-201ENST00000550380 CCDC144AA2RUR9 1427 aa18.04■□□□□ 0.48
LINC02407-201ENST00000550380 TONSLQ96HA7 1378 aa18.04■□□□□ 0.48
LINC02407-201ENST00000550380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
LINC02407-201ENST00000550380 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
LINC02407-201ENST00000550380 MROH2AA6NES4 1674 aa18.02■□□□□ 0.47
LINC02407-201ENST00000550380 WASHC2CQ9Y4E1 1318 aa18.01■□□□□ 0.47
LINC02407-201ENST00000550380 STAC3Q96MF2 364 aa18.01■□□□□ 0.47
LINC02407-201ENST00000550380 GGT6Q6P531 493 aa17.98■□□□□ 0.47
LINC02407-201ENST00000550380 NPATQ14207 1427 aa17.98■□□□□ 0.47
LINC02407-201ENST00000550380 PLA2R1Q13018 1463 aa17.97■□□□□ 0.47
LINC02407-201ENST00000550380 SIGLEC1Q9BZZ2 1709 aa17.97■□□□□ 0.47
LINC02407-201ENST00000550380 NOS1P29475 1434 aa17.95■□□□□ 0.46
LINC02407-201ENST00000550380 KIF1BO60333 1816 aa17.94■□□□□ 0.46
LINC02407-201ENST00000550380 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
LINC02407-201ENST00000550380 PIK3C2BO00750 1634 aa17.94■□□□□ 0.46
LINC02407-201ENST00000550380 CLTCQ00610 1675 aaKnown RBP17.93■□□□□ 0.46
LINC02407-201ENST00000550380 PREX1Q8TCU6 1659 aa17.93■□□□□ 0.46
LINC02407-201ENST00000550380 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
LINC02407-201ENST00000550380 FOXD1Q16676 465 aa17.91■□□□□ 0.46
LINC02407-201ENST00000550380 ESF1Q9H501 851 aaKnown RBP17.91■□□□□ 0.46
LINC02407-201ENST00000550380 SPATA31D1Q6ZQQ2 1576 aa17.91■□□□□ 0.46
LINC02407-201ENST00000550380 PPP1R15AO75807 674 aaPredicted RBP17.9■□□□□ 0.46
LINC02407-201ENST00000550380 SLC52A1Q9NWF4 448 aa17.9■□□□□ 0.46
LINC02407-201ENST00000550380 CLTCL1P53675 1640 aa17.9■□□□□ 0.46
LINC02407-201ENST00000550380 KDM5AP29375 1690 aaKnown RBP17.9■□□□□ 0.46
LINC02407-201ENST00000550380 UHRF1BP1Q6BDS2 1440 aa17.89■□□□□ 0.45
LINC02407-201ENST00000550380 SPATA31E1Q6ZUB1 1445 aa17.89■□□□□ 0.45
LINC02407-201ENST00000550380 FER1L4A9Z1Z3 1794 aa17.88■□□□□ 0.45
LINC02407-201ENST00000550380 ERVK-7P63135 1459 aa17.87■□□□□ 0.45
LINC02407-201ENST00000550380 ARID4BQ4LE39 1312 aaPredicted RBP17.86■□□□□ 0.45
LINC02407-201ENST00000550380 ADGRB3O60242 1522 aa17.86■□□□□ 0.45
LINC02407-201ENST00000550380 SYNMO15061 1565 aa17.85■□□□□ 0.45
LINC02407-201ENST00000550380 ZMYM3Q14202 1370 aa17.83■□□□□ 0.45
LINC02407-201ENST00000550380 RPGRIP1LQ68CZ1 1315 aa17.83■□□□□ 0.44
LINC02407-201ENST00000550380 L3MBTL2Q969R5 705 aa17.83■□□□□ 0.44
LINC02407-201ENST00000550380 MYOM2P54296 1465 aa17.82■□□□□ 0.44
LINC02407-201ENST00000550380 IFT172Q9UG01 1749 aa17.81■□□□□ 0.44
LINC02407-201ENST00000550380 ADAMTSL3P82987 1691 aa17.81■□□□□ 0.44
LINC02407-201ENST00000550380 KIAA1210Q9ULL0 1709 aa17.79■□□□□ 0.44
LINC02407-201ENST00000550380 CFAP65Q6ZU64 1925 aaKnown RBP17.78■□□□□ 0.44
LINC02407-201ENST00000550380 NLRP1Q9C000 1473 aa17.78■□□□□ 0.44
LINC02407-201ENST00000550380 LAMC1P11047 1609 aa17.78■□□□□ 0.44
LINC02407-201ENST00000550380 C3P01024 1663 aa17.77■□□□□ 0.44
LINC02407-201ENST00000550380 ZFYVE9O95405 1425 aa17.77■□□□□ 0.44
LINC02407-201ENST00000550380 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
LINC02407-201ENST00000550380 RALGAPBQ86X10 1494 aa17.76■□□□□ 0.43
LINC02407-201ENST00000550380 PPLO60437 1756 aa17.76■□□□□ 0.43
LINC02407-201ENST00000550380 PRAG1Q86YV5 1406 aa17.75■□□□□ 0.43
LINC02407-201ENST00000550380 NRXN1Q9ULB1 1477 aa17.75■□□□□ 0.43
LINC02407-201ENST00000550380 UGGT1Q9NYU2 1555 aa17.74■□□□□ 0.43
LINC02407-201ENST00000550380 MADDQ8WXG6 1647 aa17.73■□□□□ 0.43
LINC02407-201ENST00000550380 MLECQ14165 292 aa17.73■□□□□ 0.43
LINC02407-201ENST00000550380 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
LINC02407-201ENST00000550380 SETD1BQ9UPS6 1966 aaKnown RBP17.72■□□□□ 0.43
LINC02407-201ENST00000550380 TNRQ92752 1358 aa17.72■□□□□ 0.43
LINC02407-201ENST00000550380 DCAF11Q8TEB1 546 aa17.72■□□□□ 0.43
LINC02407-201ENST00000550380 GPRASP1Q5JY77 1395 aa17.7■□□□□ 0.42
LINC02407-201ENST00000550380 NEXMIFQ5QGS0 1516 aa17.69■□□□□ 0.42
LINC02407-201ENST00000550380 RIMS1Q86UR5 1692 aaKnown RBP17.69■□□□□ 0.42
LINC02407-201ENST00000550380 IDI1Q13907 227 aa17.69■□□□□ 0.42
LINC02407-201ENST00000550380 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
LINC02407-201ENST00000550380 SETBP1Q9Y6X0 1596 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms