RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 MIA2Q96PC5 1412 aa31.3■■■□□ 2.6
SLC38A1-208ENST00000550173 KDM5DQ9BY66 1539 aa31.29■■■□□ 2.6
SLC38A1-208ENST00000550173 WASHC2CQ9Y4E1 1318 aa31.29■■■□□ 2.6
SLC38A1-208ENST00000550173 APLP2Q06481 763 aa31.29■■■□□ 2.6
SLC38A1-208ENST00000550173 FAM135AQ9P2D6 1515 aa31.28■■■□□ 2.6
SLC38A1-208ENST00000550173 MAST1Q9Y2H9 1570 aa31.26■■■□□ 2.6
SLC38A1-208ENST00000550173 FBXO31Q5XUX0 539 aaPredicted RBP31.26■■■□□ 2.59
SLC38A1-208ENST00000550173 PLA2R1Q13018 1463 aa31.26■■■□□ 2.59
SLC38A1-208ENST00000550173 PKD2Q13563 968 aa31.25■■■□□ 2.59
SLC38A1-208ENST00000550173 A2ML1A8K2U0 1454 aa31.24■■■□□ 2.59
SLC38A1-208ENST00000550173 PZPP20742 1482 aa31.23■■■□□ 2.59
SLC38A1-208ENST00000550173 TNRQ92752 1358 aa31.23■■■□□ 2.59
SLC38A1-208ENST00000550173 LTBP4Q8N2S1 1624 aa31.23■■■□□ 2.59
SLC38A1-208ENST00000550173 TCOF1Q13428 1488 aaKnown RBP31.2■■■□□ 2.58
SLC38A1-208ENST00000550173 DNMT1P26358 1616 aaKnown RBP31.19■■■□□ 2.58
SLC38A1-208ENST00000550173 RNF17Q9BXT8 1623 aaKnown RBP31.16■■■□□ 2.58
SLC38A1-208ENST00000550173 ZNF335Q9H4Z2 1342 aaPredicted RBP31.14■■■□□ 2.58
SLC38A1-208ENST00000550173 EIF2AK4Q9P2K8 1649 aaKnown RBP31.13■■■□□ 2.57
SLC38A1-208ENST00000550173 PTPN23Q9H3S7 1636 aa31.11■■■□□ 2.57
SLC38A1-208ENST00000550173 IQSEC2Q5JU85 1478 aa31.1■■■□□ 2.57
SLC38A1-208ENST00000550173 ABCC3O15438 1527 aa31.09■■■□□ 2.57
SLC38A1-208ENST00000550173 DUOX2Q9NRD8 1548 aa31.09■■■□□ 2.57
SLC38A1-208ENST00000550173 ZC3H13Q5T200 1668 aaKnown RBP31.09■■■□□ 2.57
SLC38A1-208ENST00000550173 ABCC5O15440 1437 aa31.07■■■□□ 2.57
SLC38A1-208ENST00000550173 NLRP1Q9C000 1473 aa31.07■■■□□ 2.56
SLC38A1-208ENST00000550173 CROCC2H7BZ55 1655 aa31.06■■■□□ 2.56
SLC38A1-208ENST00000550173 KIF15Q9NS87 1388 aa31.05■■■□□ 2.56
SLC38A1-208ENST00000550173 THEMISQ8N1K5 641 aaPredicted RBP31.05■■■□□ 2.56
SLC38A1-208ENST00000550173 SHANK2Q9UPX8 1470 aa31.05■■■□□ 2.56
SLC38A1-208ENST00000550173 FGD6Q6ZV73 1430 aa31.05■■■□□ 2.56
SLC38A1-208ENST00000550173 MROH1Q8NDA8 1641 aa31.05■■■□□ 2.56
SLC38A1-208ENST00000550173 RRP7BPQ9NSQ0 103 aa31.04■■■□□ 2.56
SLC38A1-208ENST00000550173 POLR1AO95602 1720 aaPredicted RBP31.04■■■□□ 2.56
SLC38A1-208ENST00000550173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.04■■■□□ 2.56
SLC38A1-208ENST00000550173 UGGT1Q9NYU2 1555 aa31.02■■■□□ 2.56
SLC38A1-208ENST00000550173 DAPK1P53355 1430 aa31.02■■■□□ 2.56
SLC38A1-208ENST00000550173 CEP152O94986 1710 aa31.01■■■□□ 2.56
SLC38A1-208ENST00000550173 ANKLE2Q86XL3 938 aa31.01■■■□□ 2.55
SLC38A1-208ENST00000550173 SPATA31D1Q6ZQQ2 1576 aa30.99■■■□□ 2.55
SLC38A1-208ENST00000550173 NEURL4Q96JN8 1562 aa30.99■■■□□ 2.55
SLC38A1-208ENST00000550173 ERVK-7P63135 1459 aa30.98■■■□□ 2.55
SLC38A1-208ENST00000550173 ERBINQ96RT1 1412 aa30.98■■■□□ 2.55
SLC38A1-208ENST00000550173 CFAP65Q6ZU64 1925 aaKnown RBP30.97■■■□□ 2.55
SLC38A1-208ENST00000550173 CHIC2Q9UKJ5 165 aa30.96■■■□□ 2.55
SLC38A1-208ENST00000550173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.93■■■□□ 2.54
SLC38A1-208ENST00000550173 PRDM15P57071 1507 aaPredicted RBP30.93■■■□□ 2.54
SLC38A1-208ENST00000550173 UBAP1LF5GYI3 381 aa30.92■■■□□ 2.54
SLC38A1-208ENST00000550173 ANKRD30AQ9BXX3 1397 aa30.92■■■□□ 2.54
SLC38A1-208ENST00000550173 DEPDC5O75140 1603 aa30.89■■■□□ 2.54
SLC38A1-208ENST00000550173 NPHP4O75161 1426 aaPredicted RBP30.89■■■□□ 2.53
SLC38A1-208ENST00000550173 KANK1Q14678 1352 aa30.87■■■□□ 2.53
SLC38A1-208ENST00000550173 ARHGAP31Q2M1Z3 1444 aa30.87■■■□□ 2.53
SLC38A1-208ENST00000550173 MED14O60244 1454 aa30.87■■■□□ 2.53
SLC38A1-208ENST00000550173 FAM50AQ14320 339 aaKnown RBP30.85■■■□□ 2.53
SLC38A1-208ENST00000550173 CPS1P31327 1500 aa30.83■■■□□ 2.53
SLC38A1-208ENST00000550173 UBR1Q8IWV7 1749 aa30.81■■■□□ 2.52
SLC38A1-208ENST00000550173 IQGAP1P46940 1657 aa30.81■■■□□ 2.52
SLC38A1-208ENST00000550173 DISP3Q9P2K9 1392 aa30.8■■■□□ 2.52
SLC38A1-208ENST00000550173 VWDEQ8N2E2 1590 aa30.79■■■□□ 2.52
SLC38A1-208ENST00000550173 ADGRL2O95490 1459 aa30.77■■■□□ 2.52
SLC38A1-208ENST00000550173 LMTK2Q8IWU2 1503 aa30.74■■■□□ 2.51
SLC38A1-208ENST00000550173 SCAF11Q99590 1463 aaKnown RBP30.72■■■□□ 2.51
SLC38A1-208ENST00000550173 SCAF1Q9H7N4 1312 aaKnown RBP30.72■■■□□ 2.51
SLC38A1-208ENST00000550173 TOM1O60784 492 aa30.71■■■□□ 2.51
SLC38A1-208ENST00000550173 TXNDC2Q86VQ3 553 aa30.71■■■□□ 2.51
SLC38A1-208ENST00000550173 LTKP29376 864 aa30.7■■■□□ 2.51
SLC38A1-208ENST00000550173 STAG3Q9UJ98 1225 aa30.7■■■□□ 2.51
SLC38A1-208ENST00000550173 ARHGAP23Q9P227 1491 aa30.7■■■□□ 2.5
SLC38A1-208ENST00000550173 PIK3C2BO00750 1634 aa30.69■■■□□ 2.5
SLC38A1-208ENST00000550173 SLIT1O75093 1534 aa30.69■■■□□ 2.5
SLC38A1-208ENST00000550173 PIP4K2BP78356 416 aa30.69■■■□□ 2.5
SLC38A1-208ENST00000550173 EID1Q9Y6B2 187 aa30.68■■■□□ 2.5
SLC38A1-208ENST00000550173 ANKRD50Q9ULJ7 1429 aa30.67■■■□□ 2.5
SLC38A1-208ENST00000550173 EFCAB6Q5THR3 1501 aa30.65■■■□□ 2.5
SLC38A1-208ENST00000550173 IDI1Q13907 227 aa30.65■■■□□ 2.5
SLC38A1-208ENST00000550173 STRCP1A6NGW2 1772 aa30.64■■■□□ 2.5
SLC38A1-208ENST00000550173 TMEM2Q9UHN6 1383 aa30.62■■■□□ 2.49
SLC38A1-208ENST00000550173 SYNMO15061 1565 aa30.62■■■□□ 2.49
SLC38A1-208ENST00000550173 NOS1P29475 1434 aa30.61■■■□□ 2.49
SLC38A1-208ENST00000550173 ILDR2Q71H61 639 aa30.6■■■□□ 2.49
SLC38A1-208ENST00000550173 LRRC7Q96NW7 1537 aa30.6■■■□□ 2.49
SLC38A1-208ENST00000550173 KDM5AP29375 1690 aaKnown RBP30.58■■■□□ 2.49
SLC38A1-208ENST00000550173 HSPA1LP34931 641 aa30.57■■■□□ 2.48
SLC38A1-208ENST00000550173 SLC52A1Q9NWF4 448 aa30.55■■■□□ 2.48
SLC38A1-208ENST00000550173 PPARGC1BQ86YN6 1023 aaKnown RBP30.54■■■□□ 2.48
SLC38A1-208ENST00000550173 RPRD2Q5VT52 1461 aaKnown RBP30.54■■■□□ 2.48
SLC38A1-208ENST00000550173 ADGRB3O60242 1522 aa30.52■■■□□ 2.48
SLC38A1-208ENST00000550173 TET3O43151 1660 aa30.52■■■□□ 2.48
SLC38A1-208ENST00000550173 ALKQ9UM73 1620 aa30.51■■■□□ 2.48
SLC38A1-208ENST00000550173 ROCK1Q13464 1354 aa30.51■■■□□ 2.47
SLC38A1-208ENST00000550173 ITGAEP38570 1179 aa30.5■■■□□ 2.47
SLC38A1-208ENST00000550173 UNC13BO14795 1591 aa30.49■■■□□ 2.47
SLC38A1-208ENST00000550173 GCC2Q8IWJ2 1684 aa30.46■■■□□ 2.47
SLC38A1-208ENST00000550173 SLC26A8Q96RN1 970 aa30.45■■■□□ 2.47
SLC38A1-208ENST00000550173 BCANQ96GW7 911 aa30.42■■■□□ 2.46
SLC38A1-208ENST00000550173 KCNA6P17658 529 aa30.4■■■□□ 2.46
SLC38A1-208ENST00000550173 SENP3Q9H4L4 574 aaPredicted RBP30.4■■■□□ 2.46
SLC38A1-208ENST00000550173 XIRP1Q702N8 1843 aaKnown RBP30.4■■■□□ 2.46
SLC38A1-208ENST00000550173 MYO5BQ9ULV0 1848 aa30.4■■■□□ 2.46
SLC38A1-208ENST00000550173 SOCS7O14512 581 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms