RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 MYT1LQ9UL68 1186 aa18.1■□□□□ 0.49
CACNB3-212ENST00000549971 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
CACNB3-212ENST00000549971 PKD2Q13563 968 aa18.09■□□□□ 0.49
CACNB3-212ENST00000549971 A2MP01023 1474 aa18.08■□□□□ 0.49
CACNB3-212ENST00000549971 BCORL1Q5H9F3 1711 aa18.07■□□□□ 0.48
CACNB3-212ENST00000549971 RICTORQ6R327 1708 aa18.07■□□□□ 0.48
CACNB3-212ENST00000549971 PRDM15P57071 1507 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-212ENST00000549971 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
CACNB3-212ENST00000549971 ATP10AO60312 1499 aa18.05■□□□□ 0.48
CACNB3-212ENST00000549971 PPRC1Q5VV67 1664 aaKnown RBP18.05■□□□□ 0.48
CACNB3-212ENST00000549971 VWDEQ8N2E2 1590 aa18.04■□□□□ 0.48
CACNB3-212ENST00000549971 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
CACNB3-212ENST00000549971 RNF17Q9BXT8 1623 aaKnown RBP18.03■□□□□ 0.48
CACNB3-212ENST00000549971 KIF13AQ9H1H9 1805 aa18.02■□□□□ 0.48
CACNB3-212ENST00000549971 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
CACNB3-212ENST00000549971 LMTK2Q8IWU2 1503 aa18.01■□□□□ 0.47
CACNB3-212ENST00000549971 ABCA6Q8N139 1617 aa18.01■□□□□ 0.47
CACNB3-212ENST00000549971 FRMPD1Q5SYB0 1578 aa18■□□□□ 0.47
CACNB3-212ENST00000549971 DIP2CQ9Y2E4 1556 aa18■□□□□ 0.47
CACNB3-212ENST00000549971 TET3O43151 1660 aa18■□□□□ 0.47
CACNB3-212ENST00000549971 REREQ9P2R6 1566 aa18■□□□□ 0.47
CACNB3-212ENST00000549971 KIF3BO15066 747 aa17.99■□□□□ 0.47
CACNB3-212ENST00000549971 FOXD1Q16676 465 aa17.98■□□□□ 0.47
CACNB3-212ENST00000549971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.47
CACNB3-212ENST00000549971 CCDC144AA2RUR9 1427 aa17.98■□□□□ 0.47
CACNB3-212ENST00000549971 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
CACNB3-212ENST00000549971 MROH1Q8NDA8 1641 aa17.97■□□□□ 0.47
CACNB3-212ENST00000549971 TSPOAP1O95153 1857 aa17.93■□□□□ 0.46
CACNB3-212ENST00000549971 TRPM2O94759 1503 aa17.93■□□□□ 0.46
CACNB3-212ENST00000549971 AGLP35573 1532 aa17.93■□□□□ 0.46
CACNB3-212ENST00000549971 PTPRTO14522 1441 aa17.92■□□□□ 0.46
CACNB3-212ENST00000549971 ZC3H13Q5T200 1668 aaKnown RBP17.92■□□□□ 0.46
CACNB3-212ENST00000549971 EFCAB6Q5THR3 1501 aa17.92■□□□□ 0.46
CACNB3-212ENST00000549971 L3MBTL2Q969R5 705 aa17.91■□□□□ 0.46
CACNB3-212ENST00000549971 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
CACNB3-212ENST00000549971 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
CACNB3-212ENST00000549971 E9PCH4 1651 aa17.9■□□□□ 0.46
CACNB3-212ENST00000549971 ARHGEF40Q8TER5 1519 aa17.89■□□□□ 0.45
CACNB3-212ENST00000549971 STAC3Q96MF2 364 aa17.89■□□□□ 0.45
CACNB3-212ENST00000549971 YEATS2Q9ULM3 1422 aa17.89■□□□□ 0.45
CACNB3-212ENST00000549971 PLA2R1Q13018 1463 aa17.88■□□□□ 0.45
CACNB3-212ENST00000549971 UHRF1BP1Q6BDS2 1440 aa17.88■□□□□ 0.45
CACNB3-212ENST00000549971 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
CACNB3-212ENST00000549971 ABCC3O15438 1527 aa17.86■□□□□ 0.45
CACNB3-212ENST00000549971 ARHGAP31Q2M1Z3 1444 aa17.85■□□□□ 0.45
CACNB3-212ENST00000549971 CNTLNQ9NXG0 1405 aa17.82■□□□□ 0.44
CACNB3-212ENST00000549971 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
CACNB3-212ENST00000549971 GGT6Q6P531 493 aa17.81■□□□□ 0.44
CACNB3-212ENST00000549971 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
CACNB3-212ENST00000549971 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
CACNB3-212ENST00000549971 CEP152O94986 1710 aa17.8■□□□□ 0.44
CACNB3-212ENST00000549971 COL17A1Q9UMD9 1497 aaPredicted RBP17.8■□□□□ 0.44
CACNB3-212ENST00000549971 SPATA31E1Q6ZUB1 1445 aa17.79■□□□□ 0.44
CACNB3-212ENST00000549971 RALGAPBQ86X10 1494 aa17.78■□□□□ 0.44
CACNB3-212ENST00000549971 NPATQ14207 1427 aa17.78■□□□□ 0.44
CACNB3-212ENST00000549971 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
CACNB3-212ENST00000549971 EIF4G2P78344 907 aaKnown RBP eCLIP17.76■□□□□ 0.43
CACNB3-212ENST00000549971 NOS1P29475 1434 aa17.75■□□□□ 0.43
CACNB3-212ENST00000549971 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
CACNB3-212ENST00000549971 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
CACNB3-212ENST00000549971 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
CACNB3-212ENST00000549971 MYOM2P54296 1465 aa17.7■□□□□ 0.42
CACNB3-212ENST00000549971 LAMC1P11047 1609 aa17.7■□□□□ 0.42
CACNB3-212ENST00000549971 KIF1BO60333 1816 aa17.7■□□□□ 0.42
CACNB3-212ENST00000549971 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
CACNB3-212ENST00000549971 SLC52A1Q9NWF4 448 aa17.69■□□□□ 0.42
CACNB3-212ENST00000549971 GPRASP1Q5JY77 1395 aa17.68■□□□□ 0.42
CACNB3-212ENST00000549971 PIK3C2BO00750 1634 aa17.68■□□□□ 0.42
CACNB3-212ENST00000549971 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
CACNB3-212ENST00000549971 RGL3Q3MIN7 710 aa17.67■□□□□ 0.42
CACNB3-212ENST00000549971 TRPM1Q7Z4N2 1603 aa17.66■□□□□ 0.42
CACNB3-212ENST00000549971 HSPA5P11021 654 aaKnown RBP17.65■□□□□ 0.42
CACNB3-212ENST00000549971 ZNF326Q5BKZ1 582 aaKnown RBP17.65■□□□□ 0.42
CACNB3-212ENST00000549971 ESF1Q9H501 851 aaKnown RBP17.65■□□□□ 0.42
CACNB3-212ENST00000549971 KDM2AQ9Y2K7 1162 aa17.65■□□□□ 0.42
CACNB3-212ENST00000549971 ROCK2O75116 1388 aaKnown RBP17.65■□□□□ 0.42
CACNB3-212ENST00000549971 ARID4BQ4LE39 1312 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-212ENST00000549971 PREX1Q8TCU6 1659 aa17.64■□□□□ 0.41
CACNB3-212ENST00000549971 USP47Q96K76 1375 aa17.64■□□□□ 0.41
CACNB3-212ENST00000549971 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
CACNB3-212ENST00000549971 SYNMO15061 1565 aa17.63■□□□□ 0.41
CACNB3-212ENST00000549971 MADDQ8WXG6 1647 aa17.63■□□□□ 0.41
CACNB3-212ENST00000549971 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
CACNB3-212ENST00000549971 KIAA1210Q9ULL0 1709 aa17.63■□□□□ 0.41
CACNB3-212ENST00000549971 SPATA31D1Q6ZQQ2 1576 aa17.62■□□□□ 0.41
CACNB3-212ENST00000549971 UGGT1Q9NYU2 1555 aa17.61■□□□□ 0.41
CACNB3-212ENST00000549971 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
CACNB3-212ENST00000549971 SIGLEC1Q9BZZ2 1709 aa17.61■□□□□ 0.41
CACNB3-212ENST00000549971 NRXN1Q9ULB1 1477 aa17.6■□□□□ 0.41
CACNB3-212ENST00000549971 MROH2AA6NES4 1674 aa17.6■□□□□ 0.41
CACNB3-212ENST00000549971 IFT172Q9UG01 1749 aa17.59■□□□□ 0.41
CACNB3-212ENST00000549971 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
CACNB3-212ENST00000549971 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
CACNB3-212ENST00000549971 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
CACNB3-212ENST00000549971 EIF3AQ14152 1382 aaKnown RBP17.54■□□□□ 0.4
CACNB3-212ENST00000549971 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
CACNB3-212ENST00000549971 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-212ENST00000549971 PPLO60437 1756 aa17.53■□□□□ 0.4
CACNB3-212ENST00000549971 CHGAP10645 457 aaKnown RBP17.53■□□□□ 0.4
CACNB3-212ENST00000549971 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms