RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 CAMSAP1Q5T5Y3 1602 aa21.18■□□□□ 0.98
GCN1-206ENST00000549815 KDM5DQ9BY66 1539 aa21.18■□□□□ 0.98
GCN1-206ENST00000549815 CEP170BQ9Y4F5 1589 aaPredicted RBP21.17■□□□□ 0.98
GCN1-206ENST00000549815 RNF17Q9BXT8 1623 aaKnown RBP21.15■□□□□ 0.98
GCN1-206ENST00000549815 PZPP20742 1482 aa21.13■□□□□ 0.97
GCN1-206ENST00000549815 PLA2R1Q13018 1463 aa21.13■□□□□ 0.97
GCN1-206ENST00000549815 PTPN23Q9H3S7 1636 aa21.12■□□□□ 0.97
GCN1-206ENST00000549815 EIF2AK4Q9P2K8 1649 aaKnown RBP21.12■□□□□ 0.97
GCN1-206ENST00000549815 APLP2Q06481 763 aa21.11■□□□□ 0.97
GCN1-206ENST00000549815 WASHC2CQ9Y4E1 1318 aa21.1■□□□□ 0.97
GCN1-206ENST00000549815 CROCC2H7BZ55 1655 aa21.1■□□□□ 0.97
GCN1-206ENST00000549815 A2ML1A8K2U0 1454 aa21.1■□□□□ 0.97
GCN1-206ENST00000549815 TCOF1Q13428 1488 aaKnown RBP21.1■□□□□ 0.97
GCN1-206ENST00000549815 FBXO31Q5XUX0 539 aaPredicted RBP21.1■□□□□ 0.97
GCN1-206ENST00000549815 DNMT1P26358 1616 aaKnown RBP21.1■□□□□ 0.97
GCN1-206ENST00000549815 LTBP4Q8N2S1 1624 aa21.1■□□□□ 0.97
GCN1-206ENST00000549815 MROH1Q8NDA8 1641 aa21.1■□□□□ 0.97
GCN1-206ENST00000549815 ABCC5O15440 1437 aa21.1■□□□□ 0.97
GCN1-206ENST00000549815 SHANK2Q9UPX8 1470 aa21.09■□□□□ 0.97
GCN1-206ENST00000549815 NCKAP5LQ9HCH0 1330 aa21.08■□□□□ 0.97
GCN1-206ENST00000549815 FGD6Q6ZV73 1430 aa21.08■□□□□ 0.97
GCN1-206ENST00000549815 DUOX2Q9NRD8 1548 aa21.08■□□□□ 0.96
GCN1-206ENST00000549815 ZC3H13Q5T200 1668 aaKnown RBP21.07■□□□□ 0.96
GCN1-206ENST00000549815 ABCC3O15438 1527 aa21.07■□□□□ 0.96
GCN1-206ENST00000549815 TNRQ92752 1358 aa21.07■□□□□ 0.96
GCN1-206ENST00000549815 PKD2Q13563 968 aa21.05■□□□□ 0.96
GCN1-206ENST00000549815 DAPK1P53355 1430 aa21.04■□□□□ 0.96
GCN1-206ENST00000549815 KIF15Q9NS87 1388 aa21.02■□□□□ 0.96
GCN1-206ENST00000549815 SPATA31D1Q6ZQQ2 1576 aa21.02■□□□□ 0.95
GCN1-206ENST00000549815 CEP152O94986 1710 aa21.01■□□□□ 0.95
GCN1-206ENST00000549815 ERBINQ96RT1 1412 aa21■□□□□ 0.95
GCN1-206ENST00000549815 NLRP1Q9C000 1473 aa21■□□□□ 0.95
GCN1-206ENST00000549815 PRDM15P57071 1507 aaPredicted RBP20.99■□□□□ 0.95
GCN1-206ENST00000549815 NEURL4Q96JN8 1562 aa20.98■□□□□ 0.95
GCN1-206ENST00000549815 IQSEC2Q5JU85 1478 aa20.98■□□□□ 0.95
GCN1-206ENST00000549815 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
GCN1-206ENST00000549815 ERVK-7P63135 1459 aa20.97■□□□□ 0.95
GCN1-206ENST00000549815 RRP7BPQ9NSQ0 103 aa20.97■□□□□ 0.95
GCN1-206ENST00000549815 DEPDC5O75140 1603 aa20.96■□□□□ 0.95
GCN1-206ENST00000549815 ZNF335Q9H4Z2 1342 aaPredicted RBP20.96■□□□□ 0.95
GCN1-206ENST00000549815 UGGT1Q9NYU2 1555 aa20.95■□□□□ 0.94
GCN1-206ENST00000549815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.93■□□□□ 0.94
GCN1-206ENST00000549815 ARHGAP31Q2M1Z3 1444 aa20.93■□□□□ 0.94
GCN1-206ENST00000549815 ANKRD30AQ9BXX3 1397 aa20.92■□□□□ 0.94
GCN1-206ENST00000549815 ADGRL2O95490 1459 aa20.92■□□□□ 0.94
GCN1-206ENST00000549815 CFAP65Q6ZU64 1925 aaKnown RBP20.91■□□□□ 0.94
GCN1-206ENST00000549815 THEMISQ8N1K5 641 aaPredicted RBP20.91■□□□□ 0.94
GCN1-206ENST00000549815 CHIC2Q9UKJ5 165 aa20.91■□□□□ 0.94
GCN1-206ENST00000549815 VWDEQ8N2E2 1590 aa20.89■□□□□ 0.94
GCN1-206ENST00000549815 MED14O60244 1454 aa20.89■□□□□ 0.94
GCN1-206ENST00000549815 LMTK2Q8IWU2 1503 aa20.88■□□□□ 0.93
GCN1-206ENST00000549815 ANKLE2Q86XL3 938 aa20.87■□□□□ 0.93
GCN1-206ENST00000549815 UBR1Q8IWV7 1749 aa20.87■□□□□ 0.93
GCN1-206ENST00000549815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.93
GCN1-206ENST00000549815 NPHP4O75161 1426 aaPredicted RBP20.84■□□□□ 0.93
GCN1-206ENST00000549815 FAM50AQ14320 339 aaKnown RBP20.83■□□□□ 0.93
GCN1-206ENST00000549815 KANK1Q14678 1352 aa20.83■□□□□ 0.92
GCN1-206ENST00000549815 IQGAP1P46940 1657 aa20.82■□□□□ 0.92
GCN1-206ENST00000549815 CPS1P31327 1500 aa20.8■□□□□ 0.92
GCN1-206ENST00000549815 ARHGAP23Q9P227 1491 aa20.8■□□□□ 0.92
GCN1-206ENST00000549815 SLIT1O75093 1534 aa20.79■□□□□ 0.92
GCN1-206ENST00000549815 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
GCN1-206ENST00000549815 EFCAB6Q5THR3 1501 aa20.78■□□□□ 0.92
GCN1-206ENST00000549815 PIK3C2BO00750 1634 aa20.78■□□□□ 0.92
GCN1-206ENST00000549815 SYNMO15061 1565 aa20.76■□□□□ 0.91
GCN1-206ENST00000549815 NOS1P29475 1434 aa20.76■□□□□ 0.91
GCN1-206ENST00000549815 KDM5AP29375 1690 aaKnown RBP20.75■□□□□ 0.91
GCN1-206ENST00000549815 SCAF11Q99590 1463 aaKnown RBP20.75■□□□□ 0.91
GCN1-206ENST00000549815 STRCP1A6NGW2 1772 aa20.74■□□□□ 0.91
GCN1-206ENST00000549815 UBAP1LF5GYI3 381 aa20.74■□□□□ 0.91
GCN1-206ENST00000549815 LTKP29376 864 aa20.74■□□□□ 0.91
GCN1-206ENST00000549815 ROCK1Q13464 1354 aa20.72■□□□□ 0.91
GCN1-206ENST00000549815 UNC13BO14795 1591 aa20.72■□□□□ 0.91
GCN1-206ENST00000549815 IDI1Q13907 227 aa20.72■□□□□ 0.91
GCN1-206ENST00000549815 TMEM2Q9UHN6 1383 aa20.71■□□□□ 0.91
GCN1-206ENST00000549815 TET3O43151 1660 aa20.7■□□□□ 0.91
GCN1-206ENST00000549815 RPRD2Q5VT52 1461 aaKnown RBP20.7■□□□□ 0.9
GCN1-206ENST00000549815 TXNDC2Q86VQ3 553 aa20.69■□□□□ 0.9
GCN1-206ENST00000549815 PPARGC1BQ86YN6 1023 aaKnown RBP20.67■□□□□ 0.9
GCN1-206ENST00000549815 ADGRB3O60242 1522 aa20.67■□□□□ 0.9
GCN1-206ENST00000549815 LRRC7Q96NW7 1537 aa20.67■□□□□ 0.9
GCN1-206ENST00000549815 ALKQ9UM73 1620 aa20.67■□□□□ 0.9
GCN1-206ENST00000549815 GCC2Q8IWJ2 1684 aa20.67■□□□□ 0.9
GCN1-206ENST00000549815 SLC52A1Q9NWF4 448 aa20.64■□□□□ 0.89
GCN1-206ENST00000549815 EID1Q9Y6B2 187 aa20.64■□□□□ 0.89
GCN1-206ENST00000549815 STAG3Q9UJ98 1225 aa20.63■□□□□ 0.89
GCN1-206ENST00000549815 IQGAP3Q86VI3 1631 aa20.63■□□□□ 0.89
GCN1-206ENST00000549815 E9PCH4 1651 aa20.62■□□□□ 0.89
GCN1-206ENST00000549815 TOM1O60784 492 aa20.62■□□□□ 0.89
GCN1-206ENST00000549815 MYO5BQ9ULV0 1848 aa20.6■□□□□ 0.89
GCN1-206ENST00000549815 ITGAEP38570 1179 aa20.59■□□□□ 0.89
GCN1-206ENST00000549815 RRBP1Q9P2E9 1410 aaKnown RBP20.59■□□□□ 0.89
GCN1-206ENST00000549815 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
GCN1-206ENST00000549815 XIRP1Q702N8 1843 aaKnown RBP20.58■□□□□ 0.89
GCN1-206ENST00000549815 TMEM131LA2VDJ0 1609 aa20.58■□□□□ 0.89
GCN1-206ENST00000549815 ZFYVE9O95405 1425 aa20.57■□□□□ 0.88
GCN1-206ENST00000549815 PIP4K2BP78356 416 aa20.57■□□□□ 0.88
GCN1-206ENST00000549815 HSPA1LP34931 641 aa20.55■□□□□ 0.88
GCN1-206ENST00000549815 NUP155O75694 1391 aa20.55■□□□□ 0.88
GCN1-206ENST00000549815 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 275.1 ms