RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
PRDM4-204ENST00000549416 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
PRDM4-204ENST00000549416 NPDC1Q9NQX5 325 aaPredicted RBP10.64□□□□□ -0.71
PRDM4-204ENST00000549416 FAM205CA6NFA0 338 aa10.63□□□□□ -0.71
PRDM4-204ENST00000549416 BCL2L12Q9HB09 334 aa10.63□□□□□ -0.71
PRDM4-204ENST00000549416 ZMYND10O75800 440 aa10.62□□□□□ -0.71
PRDM4-204ENST00000549416 PTGDRQ13258 359 aa10.62□□□□□ -0.71
PRDM4-204ENST00000549416 POTEEQ6S8J3 1075 aa10.6□□□□□ -0.71
PRDM4-204ENST00000549416 HS3ST6Q96QI5 342 aa10.6□□□□□ -0.71
PRDM4-204ENST00000549416 FCHSD2O94868 740 aa10.59□□□□□ -0.71
PRDM4-204ENST00000549416 BARGINQ6ZT62 677 aa10.59□□□□□ -0.71
PRDM4-204ENST00000549416 COL9A1P20849 921 aa10.58□□□□□ -0.72
PRDM4-204ENST00000549416 FECHP22830 423 aa10.57□□□□□ -0.72
PRDM4-204ENST00000549416 PTPREP23469 700 aa10.57□□□□□ -0.72
PRDM4-204ENST00000549416 HIC1Q14526 733 aa10.57□□□□□ -0.72
PRDM4-204ENST00000549416 ZNF687Q8N1G0 1237 aa10.57□□□□□ -0.72
PRDM4-204ENST00000549416 GNPATO15228 680 aa10.56□□□□□ -0.72
PRDM4-204ENST00000549416 KCNK17Q96T54 332 aa10.54□□□□□ -0.72
PRDM4-204ENST00000549416 PPP1R3GB7ZBB8 358 aa10.53□□□□□ -0.72
PRDM4-204ENST00000549416 PSEN2P49810 448 aa10.53□□□□□ -0.72
PRDM4-204ENST00000549416 CERKQ8TCT0 537 aa10.53□□□□□ -0.72
PRDM4-204ENST00000549416 SLC24A3Q9HC58 644 aa10.53□□□□□ -0.72
PRDM4-204ENST00000549416 AXIN2Q9Y2T1 843 aa10.53□□□□□ -0.72
PRDM4-204ENST00000549416 ARHGAP33O14559 1287 aa10.51□□□□□ -0.73
PRDM4-204ENST00000549416 PRSS12P56730 875 aa10.5□□□□□ -0.73
PRDM4-204ENST00000549416 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
PRDM4-204ENST00000549416 PADI6Q6TGC4 694 aa10.5□□□□□ -0.73
PRDM4-204ENST00000549416 TTC13Q8NBP0 860 aa10.5□□□□□ -0.73
PRDM4-204ENST00000549416 PBX2P40425 430 aa10.49□□□□□ -0.73
PRDM4-204ENST00000549416 MAP2K5Q13163 448 aa10.49□□□□□ -0.73
PRDM4-204ENST00000549416 CDCA7LQ96GN5 454 aa10.49□□□□□ -0.73
PRDM4-204ENST00000549416 FAM198AQ9UFP1 575 aa10.49□□□□□ -0.73
PRDM4-204ENST00000549416 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
PRDM4-204ENST00000549416 RBM27Q9P2N5 1060 aaKnown RBP10.48□□□□□ -0.73
PRDM4-204ENST00000549416 PROX2Q3B8N5 592 aa10.47□□□□□ -0.73
PRDM4-204ENST00000549416 ZBED2Q9BTP6 218 aa10.47□□□□□ -0.73
PRDM4-204ENST00000549416 TSKSQ9UJT2 592 aa10.47□□□□□ -0.73
PRDM4-204ENST00000549416 MINK1Q8N4C8 1332 aaPredicted RBP10.47□□□□□ -0.73
PRDM4-204ENST00000549416 IRF6O14896 467 aa10.46□□□□□ -0.73
PRDM4-204ENST00000549416 KCNH8Q96L42 1107 aa10.46□□□□□ -0.73
PRDM4-204ENST00000549416 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
PRDM4-204ENST00000549416 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
PRDM4-204ENST00000549416 FAM161AQ3B820 660 aa10.44□□□□□ -0.74
PRDM4-204ENST00000549416 POTEGQ6S5H5 508 aa10.44□□□□□ -0.74
PRDM4-204ENST00000549416 POTEMA6NI47 508 aa10.43□□□□□ -0.74
PRDM4-204ENST00000549416 C3orf80F5H4A9 247 aa10.43□□□□□ -0.74
PRDM4-204ENST00000549416 AK7Q96M32 723 aa10.43□□□□□ -0.74
PRDM4-204ENST00000549416 SLC4A5Q9BY07 1137 aa10.43□□□□□ -0.74
PRDM4-204ENST00000549416 ADGRG1Q9Y653 693 aa10.42□□□□□ -0.74
PRDM4-204ENST00000549416 ONECUT3O60422 494 aaPredicted RBP10.41□□□□□ -0.74
PRDM4-204ENST00000549416 VPS9D1Q9Y2B5 631 aa10.41□□□□□ -0.74
PRDM4-204ENST00000549416 TRIM66O15016 1216 aa10.4□□□□□ -0.74
PRDM4-204ENST00000549416 LSM11P83369 360 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRDM4-204ENST00000549416 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.74
PRDM4-204ENST00000549416 KRTAP3-2Q9BYR7 98 aa10.4□□□□□ -0.74
PRDM4-204ENST00000549416 PHOX2BQ99453 314 aa10.39□□□□□ -0.75
PRDM4-204ENST00000549416 KIAA1468Q9P260 1216 aa10.39□□□□□ -0.75
PRDM4-204ENST00000549416 PACS2Q86VP3 889 aa10.38□□□□□ -0.75
PRDM4-204ENST00000549416 TATDN2Q93075 761 aa10.38□□□□□ -0.75
PRDM4-204ENST00000549416 NUDT18Q6ZVK8 323 aa10.37□□□□□ -0.75
PRDM4-204ENST00000549416 METTL3Q86U44 580 aaKnown RBP10.37□□□□□ -0.75
PRDM4-204ENST00000549416 PXYLP1Q8TE99 480 aa10.37□□□□□ -0.75
PRDM4-204ENST00000549416 EYA1Q99502 592 aa10.37□□□□□ -0.75
PRDM4-204ENST00000549416 RABGEF1Q9UJ41 708 aa10.37□□□□□ -0.75
PRDM4-204ENST00000549416 TK2O00142 265 aa10.36□□□□□ -0.75
PRDM4-204ENST00000549416 SMAPO00193 183 aa10.36□□□□□ -0.75
PRDM4-204ENST00000549416 OATP04181 439 aa10.36□□□□□ -0.75
PRDM4-204ENST00000549416 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
PRDM4-204ENST00000549416 ADGRD1Q6QNK2 874 aa10.35□□□□□ -0.75
PRDM4-204ENST00000549416 CDAN1Q8IWY9 1227 aa10.35□□□□□ -0.75
PRDM4-204ENST00000549416 NBPF26B4DH59 902 aa10.34□□□□□ -0.75
PRDM4-204ENST00000549416 BHMG1C9JSJ3 638 aaPredicted RBP10.34□□□□□ -0.75
PRDM4-204ENST00000549416 AMHR2Q16671 573 aa10.34□□□□□ -0.75
PRDM4-204ENST00000549416 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
PRDM4-204ENST00000549416 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
PRDM4-204ENST00000549416 HRO43593 1189 aa10.33□□□□□ -0.76
PRDM4-204ENST00000549416 PDE4DQ08499 809 aa10.33□□□□□ -0.76
PRDM4-204ENST00000549416 BRPF1P55201 1214 aaPredicted RBP10.32□□□□□ -0.76
PRDM4-204ENST00000549416 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
PRDM4-204ENST00000549416 SEPT9Q9UHD8 586 aaPredicted RBP10.32□□□□□ -0.76
PRDM4-204ENST00000549416 RCCD1A6NED2 376 aa10.3□□□□□ -0.76
PRDM4-204ENST00000549416 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
PRDM4-204ENST00000549416 TMUB1Q9BVT8 246 aa10.29□□□□□ -0.76
PRDM4-204ENST00000549416 GPBP1L1Q9HC44 474 aaPredicted RBP10.29□□□□□ -0.76
PRDM4-204ENST00000549416 MDM2Q00987 491 aaPredicted RBP10.28□□□□□ -0.76
PRDM4-204ENST00000549416 PARP9Q8IXQ6 854 aa10.28□□□□□ -0.76
PRDM4-204ENST00000549416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.27□□□□□ -0.77
PRDM4-204ENST00000549416 NEUROD2Q15784 382 aa10.27□□□□□ -0.77
PRDM4-204ENST00000549416 NBPF3Q9H094 633 aa10.27□□□□□ -0.77
PRDM4-204ENST00000549416 DNAJB2P25686 324 aa10.26□□□□□ -0.77
PRDM4-204ENST00000549416 FAM98CQ17RN3 349 aaKnown RBP10.26□□□□□ -0.77
PRDM4-204ENST00000549416 TTLL12Q14166 644 aaPredicted RBP10.25□□□□□ -0.77
PRDM4-204ENST00000549416 LAPTM4BQ86VI4 370 aa10.25□□□□□ -0.77
PRDM4-204ENST00000549416 TMEM134Q9H6X4 195 aa10.25□□□□□ -0.77
PRDM4-204ENST00000549416 GPCPD1Q9NPB8 672 aa10.25□□□□□ -0.77
PRDM4-204ENST00000549416 CLCN1P35523 988 aa10.24□□□□□ -0.77
PRDM4-204ENST00000549416 MRPL50Q8N5N7 158 aaKnown RBP10.24□□□□□ -0.77
PRDM4-204ENST00000549416 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
PRDM4-204ENST00000549416 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
PRDM4-204ENST00000549416 SWT1Q5T5J6 900 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms