RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 DAPK1P53355 1430 aa8.03□□□□□ -1.12
SCAF11-212ENST00000549162 SUPT5HO00267 1087 aaKnown RBP8.03□□□□□ -1.12
SCAF11-212ENST00000549162 ADGRB2O60241 1585 aa8.03□□□□□ -1.12
SCAF11-212ENST00000549162 RSPH4AQ5TD94 716 aa8.03□□□□□ -1.12
SCAF11-212ENST00000549162 ADGRB3O60242 1522 aa8.03□□□□□ -1.12
SCAF11-212ENST00000549162 MYOM2P54296 1465 aa8.02□□□□□ -1.13
SCAF11-212ENST00000549162 LMTK3Q96Q04 1460 aa8.02□□□□□ -1.13
SCAF11-212ENST00000549162 TRPM1Q7Z4N2 1603 aa8.01□□□□□ -1.13
SCAF11-212ENST00000549162 ABCC3O15438 1527 aa8.01□□□□□ -1.13
SCAF11-212ENST00000549162 UHRF1BP1Q6BDS2 1440 aa8.01□□□□□ -1.13
SCAF11-212ENST00000549162 ZFYVE9O95405 1425 aa8□□□□□ -1.13
SCAF11-212ENST00000549162 FKBP8Q14318 412 aa8□□□□□ -1.13
SCAF11-212ENST00000549162 KIF1BO60333 1816 aa8□□□□□ -1.13
SCAF11-212ENST00000549162 FOXD4L1Q9NU39 408 aa7.99□□□□□ -1.13
SCAF11-212ENST00000549162 ASXL2Q76L83 1435 aa7.99□□□□□ -1.13
SCAF11-212ENST00000549162 ABCC5O15440 1437 aa7.99□□□□□ -1.13
SCAF11-212ENST00000549162 UBR1Q8IWV7 1749 aa7.98□□□□□ -1.13
SCAF11-212ENST00000549162 TOPAZ1Q8N9V7 1692 aa7.98□□□□□ -1.13
SCAF11-212ENST00000549162 ERVK-7P63135 1459 aa7.97□□□□□ -1.13
SCAF11-212ENST00000549162 ANKRD26Q9UPS8 1709 aa7.97□□□□□ -1.13
SCAF11-212ENST00000549162 PHRF1Q9P1Y6 1649 aaKnown RBP7.97□□□□□ -1.13
SCAF11-212ENST00000549162 SYCP2Q9BX26 1530 aa7.96□□□□□ -1.13
SCAF11-212ENST00000549162 PZPP20742 1482 aa7.96□□□□□ -1.14
SCAF11-212ENST00000549162 DLC1Q96QB1 1528 aa7.96□□□□□ -1.14
SCAF11-212ENST00000549162 C3P01024 1663 aa7.96□□□□□ -1.14
SCAF11-212ENST00000549162 SLIT1O75093 1534 aa7.95□□□□□ -1.14
SCAF11-212ENST00000549162 NAIPQ13075 1403 aa7.95□□□□□ -1.14
SCAF11-212ENST00000549162 NPATQ14207 1427 aa7.95□□□□□ -1.14
SCAF11-212ENST00000549162 ALKQ9UM73 1620 aa7.95□□□□□ -1.14
SCAF11-212ENST00000549162 PLCB2Q00722 1185 aa7.95□□□□□ -1.14
SCAF11-212ENST00000549162 NRXN3Q9Y4C0 1643 aa7.94□□□□□ -1.14
SCAF11-212ENST00000549162 JPH4Q96JJ6 628 aa7.94□□□□□ -1.14
SCAF11-212ENST00000549162 XRN1Q8IZH2 1706 aaKnown RBP7.94□□□□□ -1.14
SCAF11-212ENST00000549162 TAOK2Q9UL54 1235 aa7.94□□□□□ -1.14
SCAF11-212ENST00000549162 NCOA1Q15788 1441 aa7.94□□□□□ -1.14
SCAF11-212ENST00000549162 CD109Q6YHK3 1445 aa7.93□□□□□ -1.14
SCAF11-212ENST00000549162 NOS1P29475 1434 aa7.93□□□□□ -1.14
SCAF11-212ENST00000549162 TIMELESSQ9UNS1 1208 aa7.92□□□□□ -1.14
SCAF11-212ENST00000549162 ARHGAP23Q9P227 1491 aa7.91□□□□□ -1.14
SCAF11-212ENST00000549162 C9orf84Q5VXU9 1444 aa7.91□□□□□ -1.14
SCAF11-212ENST00000549162 CCNB3Q8WWL7 1395 aa7.91□□□□□ -1.14
SCAF11-212ENST00000549162 MST1RQ04912 1400 aa7.9□□□□□ -1.15
SCAF11-212ENST00000549162 BCANQ96GW7 911 aa7.9□□□□□ -1.15
SCAF11-212ENST00000549162 CNTLNQ9NXG0 1405 aa7.9□□□□□ -1.15
SCAF11-212ENST00000549162 CLTCL1P53675 1640 aa7.9□□□□□ -1.15
SCAF11-212ENST00000549162 DAXXQ9UER7 740 aaPredicted RBP7.89□□□□□ -1.15
SCAF11-212ENST00000549162 CPS1P31327 1500 aa7.89□□□□□ -1.15
SCAF11-212ENST00000549162 SCAPERQ9BY12 1400 aa7.89□□□□□ -1.15
SCAF11-212ENST00000549162 ABCC6O95255 1503 aa7.88□□□□□ -1.15
SCAF11-212ENST00000549162 PTPRKQ15262 1439 aa7.88□□□□□ -1.15
SCAF11-212ENST00000549162 OSCARQ8IYS5 282 aa7.87□□□□□ -1.15
SCAF11-212ENST00000549162 MED14O60244 1454 aa7.87□□□□□ -1.15
SCAF11-212ENST00000549162 IQSEC2Q5JU85 1478 aa7.87□□□□□ -1.15
SCAF11-212ENST00000549162 CRYBG1Q9Y4K1 1723 aa7.87□□□□□ -1.15
SCAF11-212ENST00000549162 NRKQ7Z2Y5 1582 aa7.86□□□□□ -1.15
SCAF11-212ENST00000549162 NEXMIFQ5QGS0 1516 aa7.86□□□□□ -1.15
SCAF11-212ENST00000549162 STAC3Q96MF2 364 aa7.86□□□□□ -1.15
SCAF11-212ENST00000549162 ARHGEF28Q8N1W1 1705 aaKnown RBP7.86□□□□□ -1.15
SCAF11-212ENST00000549162 MYOM1P52179 1685 aa7.86□□□□□ -1.15
SCAF11-212ENST00000549162 AKAP12Q02952 1782 aa7.85□□□□□ -1.15
SCAF11-212ENST00000549162 NALCNQ8IZF0 1738 aa7.85□□□□□ -1.15
SCAF11-212ENST00000549162 PLA2R1Q13018 1463 aa7.85□□□□□ -1.15
SCAF11-212ENST00000549162 ARHGAP5Q13017 1502 aa7.85□□□□□ -1.15
SCAF11-212ENST00000549162 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.15
SCAF11-212ENST00000549162 CAMTA1Q9Y6Y1 1673 aa7.84□□□□□ -1.15
SCAF11-212ENST00000549162 HAP1P54257 671 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-212ENST00000549162 CHD2O14647 1828 aaKnown RBP7.83□□□□□ -1.16
SCAF11-212ENST00000549162 ITSN1Q15811 1721 aa7.82□□□□□ -1.16
SCAF11-212ENST00000549162 NLRP1Q9C000 1473 aa7.82□□□□□ -1.16
SCAF11-212ENST00000549162 SPATA31E1Q6ZUB1 1445 aa7.82□□□□□ -1.16
SCAF11-212ENST00000549162 ADGRL1O94910 1474 aa7.81□□□□□ -1.16
SCAF11-212ENST00000549162 A2MP01023 1474 aa7.81□□□□□ -1.16
SCAF11-212ENST00000549162 CICQ96RK0 1608 aaPredicted RBP7.81□□□□□ -1.16
SCAF11-212ENST00000549162 INSRP06213 1382 aa7.81□□□□□ -1.16
SCAF11-212ENST00000549162 DHX29Q7Z478 1369 aaKnown RBP7.81□□□□□ -1.16
SCAF11-212ENST00000549162 ADGRB1O14514 1584 aa7.81□□□□□ -1.16
SCAF11-212ENST00000549162 TPRNQ4KMQ1 711 aa7.81□□□□□ -1.16
SCAF11-212ENST00000549162 TECPR2O15040 1411 aa7.81□□□□□ -1.16
SCAF11-212ENST00000549162 SETD5Q9C0A6 1442 aa7.81□□□□□ -1.16
SCAF11-212ENST00000549162 RALGAPBQ86X10 1494 aa7.8□□□□□ -1.16
SCAF11-212ENST00000549162 MARF1Q9Y4F3 1742 aaKnown RBP7.8□□□□□ -1.16
SCAF11-212ENST00000549162 MON2Q7Z3U7 1717 aa7.8□□□□□ -1.16
SCAF11-212ENST00000549162 MYO5BQ9ULV0 1848 aa7.8□□□□□ -1.16
SCAF11-212ENST00000549162 CNKSR2Q8WXI2 1034 aa7.8□□□□□ -1.16
SCAF11-212ENST00000549162 CHMP7Q8WUX9 453 aaPredicted RBP7.79□□□□□ -1.16
SCAF11-212ENST00000549162 PLEKHG2Q9H7P9 1386 aa7.79□□□□□ -1.16
SCAF11-212ENST00000549162 SCAF1Q9H7N4 1312 aaKnown RBP7.78□□□□□ -1.16
SCAF11-212ENST00000549162 NCOA3Q9Y6Q9 1424 aa7.77□□□□□ -1.17
SCAF11-212ENST00000549162 XIRP1Q702N8 1843 aaKnown RBP7.77□□□□□ -1.17
SCAF11-212ENST00000549162 SBNO2Q9Y2G9 1366 aa7.77□□□□□ -1.17
SCAF11-212ENST00000549162 PIAS4Q8N2W9 510 aaPredicted RBP7.76□□□□□ -1.17
SCAF11-212ENST00000549162 CDK11AQ9UQ88 783 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-212ENST00000549162 COL22A1Q8NFW1 1626 aaPredicted RBP7.74□□□□□ -1.17
SCAF11-212ENST00000549162 KIF1AQ12756 1690 aa7.74□□□□□ -1.17
SCAF11-212ENST00000549162 MED1Q15648 1581 aaPredicted RBP7.74□□□□□ -1.17
SCAF11-212ENST00000549162 SHPRHQ149N8 1683 aa7.74□□□□□ -1.17
SCAF11-212ENST00000549162 FMN2Q9NZ56 1722 aa7.74□□□□□ -1.17
SCAF11-212ENST00000549162 ANKRD30AQ9BXX3 1397 aa7.74□□□□□ -1.17
SCAF11-212ENST00000549162 TRAPPC8Q9Y2L5 1435 aa7.73□□□□□ -1.17
SCAF11-212ENST00000549162 CDC42BPGQ6DT37 1551 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms