RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 PBRM1Q86U86 1689 aa2.47□□□□□ -2.01
LGR5-205ENST00000549015 GOLGA2Q08379 1002 aa2.47□□□□□ -2.01
LGR5-205ENST00000549015 IFNL1Q8IU54 200 aa2.47□□□□□ -2.01
LGR5-205ENST00000549015 FARP1Q9Y4F1 1045 aaPredicted RBP2.47□□□□□ -2.01
LGR5-205ENST00000549015 CCDC61Q9Y6R9 512 aa2.47□□□□□ -2.01
LGR5-205ENST00000549015 ARHGEF11O15085 1522 aa2.47□□□□□ -2.01
LGR5-205ENST00000549015 KIAA0586Q9BVV6 1533 aa2.47□□□□□ -2.01
LGR5-205ENST00000549015 SYNJ2O15056 1496 aa2.46□□□□□ -2.02
LGR5-205ENST00000549015 GRIN2AQ12879 1464 aa2.46□□□□□ -2.02
LGR5-205ENST00000549015 EIF4G3O43432 1585 aaKnown RBP2.46□□□□□ -2.02
LGR5-205ENST00000549015 MLLT3P42568 568 aaPredicted RBP2.46□□□□□ -2.02
LGR5-205ENST00000549015 PDE4DQ08499 809 aa2.46□□□□□ -2.02
LGR5-205ENST00000549015 CCER1Q8TC90 406 aaPredicted RBP2.46□□□□□ -2.02
LGR5-205ENST00000549015 KIAA0556O60303 1618 aa2.46□□□□□ -2.02
LGR5-205ENST00000549015 TCOF1Q13428 1488 aaKnown RBP2.45□□□□□ -2.02
LGR5-205ENST00000549015 NUP160Q12769 1436 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 FHOD3Q2V2M9 1422 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 MYOM3Q5VTT5 1437 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 FGD6Q6ZV73 1430 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 MIA2Q96PC5 1412 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 ARID3CA6NKF2 412 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 TRIM66O15016 1216 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 MAP3K13O43283 966 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 MFSD10Q14728 455 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 CRISPLD2Q9H0B8 497 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 TDRD9Q8NDG6 1382 aaKnown RBP2.45□□□□□ -2.02
LGR5-205ENST00000549015 SUPT6HQ7KZ85 1726 aaKnown RBP2.45□□□□□ -2.02
LGR5-205ENST00000549015 ERCC6Q03468 1493 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 NCOA2Q15596 1464 aa2.45□□□□□ -2.02
LGR5-205ENST00000549015 HFM1A2PYH4 1435 aa2.44□□□□□ -2.02
LGR5-205ENST00000549015 EPRSP07814 1512 aaKnown RBP2.44□□□□□ -2.02
LGR5-205ENST00000549015 NUTM2FA1L443 756 aa2.44□□□□□ -2.02
LGR5-205ENST00000549015 ZNF316A6NFI3 1004 aaPredicted RBP2.44□□□□□ -2.02
LGR5-205ENST00000549015 APBB1O00213 710 aa2.44□□□□□ -2.02
LGR5-205ENST00000549015 PRKAR2AP13861 404 aaKnown RBP2.44□□□□□ -2.02
LGR5-205ENST00000549015 CAMK2BQ13554 666 aa2.44□□□□□ -2.02
LGR5-205ENST00000549015 NPM2Q86SE8 214 aaKnown RBP2.44□□□□□ -2.02
LGR5-205ENST00000549015 MS4A4AQ96JQ5 239 aa2.44□□□□□ -2.02
LGR5-205ENST00000549015 FAM117AQ9C073 453 aa2.44□□□□□ -2.02
LGR5-205ENST00000549015 ARIH1Q9Y4X5 557 aaPredicted RBP2.44□□□□□ -2.02
LGR5-205ENST00000549015 MTUS2Q5JR59 1369 aa2.44□□□□□ -2.02
LGR5-205ENST00000549015 DHX57Q6P158 1386 aaKnown RBP2.44□□□□□ -2.02
LGR5-205ENST00000549015 CARMIL2Q6F5E8 1435 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 SETD5Q9C0A6 1442 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 DISP1Q96F81 1524 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 ADCY10Q96PN6 1610 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 DPYSL4O14531 572 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 PDIA4P13667 645 aaKnown RBP2.43□□□□□ -2.02
LGR5-205ENST00000549015 MKRN3Q13064 507 aaKnown RBP2.43□□□□□ -2.02
LGR5-205ENST00000549015 TTLL12Q14166 644 aaPredicted RBP2.43□□□□□ -2.02
LGR5-205ENST00000549015 PPP1R15BQ5SWA1 713 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 KIF12Q96FN5 646 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 DDRGK1Q96HY6 314 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 C1orf115Q9H7X2 142 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 ATP1B4Q9UN42 357 aaPredicted RBP2.43□□□□□ -2.02
LGR5-205ENST00000549015 ROCK1Q13464 1354 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 PHLDB1Q86UU1 1377 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 SHANK2Q9UPX8 1470 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 GCC2Q8IWJ2 1684 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 ITSN2Q9NZM3 1697 aa2.43□□□□□ -2.02
LGR5-205ENST00000549015 UACAQ9BZF9 1416 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 MAPKBP1O60336 1514 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 ZNF608Q9ULD9 1512 aaPredicted RBP2.42□□□□□ -2.02
LGR5-205ENST00000549015 RAPGEF6Q8TEU7 1601 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 CEP170Q5SW79 1584 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 NUP153P49790 1475 aaKnown RBP2.42□□□□□ -2.02
LGR5-205ENST00000549015 RAB3GAP2Q9H2M9 1393 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 ZBTB7CA1YPR0 619 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 GRXCR2A6NFK2 248 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 SPDYE16A6NNV3 312 aaPredicted RBP2.42□□□□□ -2.02
LGR5-205ENST00000549015 FLIIQ13045 1269 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 KANK4Q5T7N3 995 aaPredicted RBP2.42□□□□□ -2.02
LGR5-205ENST00000549015 PPARGC1BQ86YN6 1023 aaKnown RBP2.42□□□□□ -2.02
LGR5-205ENST00000549015 TMEM106CQ9BVX2 250 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 GPHNQ9NQX3 736 aaPredicted RBP2.42□□□□□ -2.02
LGR5-205ENST00000549015 CDK11AQ9UQ88 783 aaPredicted RBP2.42□□□□□ -2.02
LGR5-205ENST00000549015 PTPN23Q9H3S7 1636 aa2.42□□□□□ -2.02
LGR5-205ENST00000549015 TROQ12816 1431 aaPredicted RBP2.42□□□□□ -2.02
LGR5-205ENST00000549015 MINK1Q8N4C8 1332 aaPredicted RBP2.42□□□□□ -2.02
LGR5-205ENST00000549015 ABCA8O94911 1581 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 ADGRL2O95490 1459 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 MAP2K5Q13163 448 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 PDIA6Q15084 440 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 TMC2Q8TDI7 906 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 CCDC102AQ96A19 550 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 EMILIN3Q9NT22 766 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 ZRANB1Q9UGI0 708 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 DNMT1P26358 1616 aaKnown RBP2.41□□□□□ -2.02
LGR5-205ENST00000549015 SHROOM2Q13796 1616 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 KIF14Q15058 1648 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 MAGI3Q5TCQ9 1506 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 NAIPQ13075 1403 aa2.41□□□□□ -2.02
LGR5-205ENST00000549015 LRRIQ1Q96JM4 1722 aa2.4□□□□□ -2.02
LGR5-205ENST00000549015 PLEKHG3A1L390 1219 aa2.4□□□□□ -2.03
LGR5-205ENST00000549015 IRF6O14896 467 aa2.4□□□□□ -2.03
LGR5-205ENST00000549015 DSG2Q14126 1118 aa2.4□□□□□ -2.03
LGR5-205ENST00000549015 PARP9Q8IXQ6 854 aa2.4□□□□□ -2.03
LGR5-205ENST00000549015 PCMTD1Q96MG8 357 aaPredicted RBP2.4□□□□□ -2.03
LGR5-205ENST00000549015 PHF12Q96QT6 1004 aa2.4□□□□□ -2.03
LGR5-205ENST00000549015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.4□□□□□ -2.031e-10■□□□□ 10.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms