RNA–Protein interactions for RNA: ENST00000548882.5

MMP19-207, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-207ENST00000548882 HSP90AA1P07900 732 aaKnown RBP11.89□□□□□ -0.51
MMP19-207ENST00000548882 KANK1Q14678 1352 aa11.89□□□□□ -0.51
MMP19-207ENST00000548882 TRHP20396 242 aaPredicted RBP11.89□□□□□ -0.51
MMP19-207ENST00000548882 NBPF1Q3BBV0 1214 aa11.89□□□□□ -0.51
MMP19-207ENST00000548882 KIAA0586Q9BVV6 1533 aa11.88□□□□□ -0.51
MMP19-207ENST00000548882 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
MMP19-207ENST00000548882 CCDC146Q8IYE0 955 aa11.88□□□□□ -0.51
MMP19-207ENST00000548882 CENPQQ7L2Z9 268 aaPredicted RBP11.88□□□□□ -0.51
MMP19-207ENST00000548882 THOC2Q8NI27 1593 aaKnown RBP11.87□□□□□ -0.51
MMP19-207ENST00000548882 WASHC2CQ9Y4E1 1318 aa11.87□□□□□ -0.51
MMP19-207ENST00000548882 FTSJ3Q8IY81 847 aaKnown RBP11.87□□□□□ -0.51
MMP19-207ENST00000548882 ARXQ96QS3 562 aa11.87□□□□□ -0.51
MMP19-207ENST00000548882 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
MMP19-207ENST00000548882 C9orf84Q5VXU9 1444 aa11.86□□□□□ -0.51
MMP19-207ENST00000548882 SPAG9O60271 1321 aaKnown RBP11.86□□□□□ -0.51
MMP19-207ENST00000548882 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
MMP19-207ENST00000548882 SENP3Q9H4L4 574 aaPredicted RBP11.85□□□□□ -0.51
MMP19-207ENST00000548882 MRC2Q9UBG0 1479 aa11.85□□□□□ -0.51
MMP19-207ENST00000548882 KIF3BO15066 747 aa11.84□□□□□ -0.51
MMP19-207ENST00000548882 FAM161AQ3B820 660 aa11.84□□□□□ -0.51
MMP19-207ENST00000548882 TCOF1Q13428 1488 aaKnown RBP11.84□□□□□ -0.51
MMP19-207ENST00000548882 IFT140Q96RY7 1462 aa11.84□□□□□ -0.51
MMP19-207ENST00000548882 EIF3AQ14152 1382 aaKnown RBP11.83□□□□□ -0.52
MMP19-207ENST00000548882 APAF1O14727 1248 aa11.83□□□□□ -0.52
MMP19-207ENST00000548882 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
MMP19-207ENST00000548882 BACH2Q9BYV9 841 aa11.82□□□□□ -0.52
MMP19-207ENST00000548882 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
MMP19-207ENST00000548882 CAMSAP2Q08AD1 1489 aa11.81□□□□□ -0.52
MMP19-207ENST00000548882 MAPK8IP3Q9UPT6 1336 aa11.81□□□□□ -0.52
MMP19-207ENST00000548882 U2SURPO15042 1029 aaKnown RBP11.81□□□□□ -0.52
MMP19-207ENST00000548882 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
MMP19-207ENST00000548882 E9PSI1 815 aa11.8□□□□□ -0.52
MMP19-207ENST00000548882 STAC3Q96MF2 364 aa11.8□□□□□ -0.52
MMP19-207ENST00000548882 PLB1Q6P1J6 1458 aa11.79□□□□□ -0.52
MMP19-207ENST00000548882 U2AF1L5P0DN76 240 aaPredicted RBP11.78□□□□□ -0.52
MMP19-207ENST00000548882 U2AF1Q01081 240 aaKnown RBP eCLIP11.78□□□□□ -0.52
MMP19-207ENST00000548882 ANP32BQ92688 251 aaKnown RBP11.78□□□□□ -0.52
MMP19-207ENST00000548882 PPP2R1AP30153 589 aa11.78□□□□□ -0.52
MMP19-207ENST00000548882 GGT6Q6P531 493 aa11.78□□□□□ -0.52
MMP19-207ENST00000548882 PMFBP1Q8TBY8 1022 aa11.78□□□□□ -0.52
MMP19-207ENST00000548882 RWDD1Q9H446 243 aaPredicted RBP11.78□□□□□ -0.52
MMP19-207ENST00000548882 NGEFQ8N5V2 710 aa11.77□□□□□ -0.52
MMP19-207ENST00000548882 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
MMP19-207ENST00000548882 CGNL1Q0VF96 1302 aa11.77□□□□□ -0.53
MMP19-207ENST00000548882 GSE1Q14687 1217 aa11.76□□□□□ -0.53
MMP19-207ENST00000548882 CLUAP1Q96AJ1 413 aa11.76□□□□□ -0.53
MMP19-207ENST00000548882 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
MMP19-207ENST00000548882 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
MMP19-207ENST00000548882 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
MMP19-207ENST00000548882 TRAK1Q9UPV9 953 aa11.76□□□□□ -0.53
MMP19-207ENST00000548882 COG6Q9Y2V7 657 aa11.76□□□□□ -0.53
MMP19-207ENST00000548882 POGKQ9P215 609 aa11.75□□□□□ -0.53
MMP19-207ENST00000548882 SAFB2Q14151 953 aaKnown RBP eCLIP11.75□□□□□ -0.53
MMP19-207ENST00000548882 RRP7AQ9Y3A4 280 aaKnown RBP11.75□□□□□ -0.53
MMP19-207ENST00000548882 DHX29Q7Z478 1369 aaKnown RBP11.75□□□□□ -0.53
MMP19-207ENST00000548882 SRPK2P78362 688 aaKnown RBP11.74□□□□□ -0.53
MMP19-207ENST00000548882 GRIN2AQ12879 1464 aa11.74□□□□□ -0.53
MMP19-207ENST00000548882 NUP153P49790 1475 aaKnown RBP11.74□□□□□ -0.53
MMP19-207ENST00000548882 PNNQ9H307 717 aaKnown RBP11.73□□□□□ -0.53
MMP19-207ENST00000548882 MAGI1Q96QZ7 1491 aaPredicted RBP11.73□□□□□ -0.53
MMP19-207ENST00000548882 ZNF608Q9ULD9 1512 aaPredicted RBP11.73□□□□□ -0.53
MMP19-207ENST00000548882 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
MMP19-207ENST00000548882 ERBINQ96RT1 1412 aa11.73□□□□□ -0.53
MMP19-207ENST00000548882 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
MMP19-207ENST00000548882 ARHGEF11O15085 1522 aa11.73□□□□□ -0.53
MMP19-207ENST00000548882 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
MMP19-207ENST00000548882 NFKBIBQ15653 356 aa11.72□□□□□ -0.53
MMP19-207ENST00000548882 CYB5RLQ6IPT4 315 aa11.72□□□□□ -0.53
MMP19-207ENST00000548882 SAMD9Q5K651 1589 aa11.72□□□□□ -0.53
MMP19-207ENST00000548882 ESF1Q9H501 851 aaKnown RBP11.72□□□□□ -0.53
MMP19-207ENST00000548882 BCL2L13Q9BXK5 485 aa11.72□□□□□ -0.53
MMP19-207ENST00000548882 L1TD1Q5T7N2 865 aaKnown RBP11.71□□□□□ -0.53
MMP19-207ENST00000548882 AFAP1Q8N556 730 aa11.71□□□□□ -0.53
MMP19-207ENST00000548882 CHMP4BQ9H444 224 aaKnown RBP11.71□□□□□ -0.53
MMP19-207ENST00000548882 MAGI3Q5TCQ9 1506 aa11.71□□□□□ -0.54
MMP19-207ENST00000548882 STK26Q9P289 416 aa11.71□□□□□ -0.54
MMP19-207ENST00000548882 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.54
MMP19-207ENST00000548882 ARHGAP5Q13017 1502 aa11.7□□□□□ -0.54
MMP19-207ENST00000548882 TEX14Q8IWB6 1497 aa11.7□□□□□ -0.54
MMP19-207ENST00000548882 IPO8O15397 1037 aaKnown RBP11.7□□□□□ -0.54
MMP19-207ENST00000548882 HSCBQ8IWL3 235 aa11.7□□□□□ -0.54
MMP19-207ENST00000548882 SMC4Q9NTJ3 1288 aa11.7□□□□□ -0.54
MMP19-207ENST00000548882 WDR62O43379 1518 aa11.7□□□□□ -0.54
MMP19-207ENST00000548882 CFAP70Q5T0N1 1121 aa11.7□□□□□ -0.54
MMP19-207ENST00000548882 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
MMP19-207ENST00000548882 GOLGA6L22H0YM25 854 aa11.69□□□□□ -0.54
MMP19-207ENST00000548882 ITPRIPQ8IWB1 547 aa11.69□□□□□ -0.54
MMP19-207ENST00000548882 TRIM44Q96DX7 344 aaPredicted RBP11.69□□□□□ -0.54
MMP19-207ENST00000548882 PZPP20742 1482 aa11.69□□□□□ -0.54
MMP19-207ENST00000548882 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
MMP19-207ENST00000548882 CCDC141Q6ZP82 1450 aa11.69□□□□□ -0.54
MMP19-207ENST00000548882 C20orf194Q5TEA3 1177 aa11.68□□□□□ -0.54
MMP19-207ENST00000548882 BCAR3O75815 825 aa11.68□□□□□ -0.54
MMP19-207ENST00000548882 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
MMP19-207ENST00000548882 HSP90AB1P08238 724 aaKnown RBP11.68□□□□□ -0.54
MMP19-207ENST00000548882 PANK1Q8TE04 598 aa11.68□□□□□ -0.54
MMP19-207ENST00000548882 RUNDC1Q96C34 613 aa11.68□□□□□ -0.54
MMP19-207ENST00000548882 MFAP1P55081 439 aaKnown RBP11.67□□□□□ -0.54
MMP19-207ENST00000548882 SLFN5Q08AF3 891 aa11.67□□□□□ -0.54
MMP19-207ENST00000548882 PDE3AQ14432 1141 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms