RNA–Protein interactions for RNA: ENST00000548640.5

TMEM106C-209, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-209ENST00000548640 EIF2AK4Q9P2K8 1649 aaKnown RBP19.54■□□□□ 0.72
TMEM106C-209ENST00000548640 ZNF518AQ6AHZ1 1483 aa19.53■□□□□ 0.72
TMEM106C-209ENST00000548640 SPATA31E1Q6ZUB1 1445 aa19.52■□□□□ 0.72
TMEM106C-209ENST00000548640 POLR1AO95602 1720 aaPredicted RBP19.52■□□□□ 0.72
TMEM106C-209ENST00000548640 CCDC7Q96M83 1385 aa19.52■□□□□ 0.72
TMEM106C-209ENST00000548640 WASHC2AQ641Q2 1341 aa19.51■□□□□ 0.71
TMEM106C-209ENST00000548640 CD109Q6YHK3 1445 aa19.51■□□□□ 0.71
TMEM106C-209ENST00000548640 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
TMEM106C-209ENST00000548640 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
TMEM106C-209ENST00000548640 AFAP1Q8N556 730 aa19.51■□□□□ 0.71
TMEM106C-209ENST00000548640 MYT1LQ9UL68 1186 aa19.5■□□□□ 0.71
TMEM106C-209ENST00000548640 ARID4BQ4LE39 1312 aaPredicted RBP19.5■□□□□ 0.71
TMEM106C-209ENST00000548640 USP47Q96K76 1375 aa19.49■□□□□ 0.71
TMEM106C-209ENST00000548640 ZNF326Q5BKZ1 582 aaKnown RBP19.49■□□□□ 0.71
TMEM106C-209ENST00000548640 DHX29Q7Z478 1369 aaKnown RBP19.48■□□□□ 0.71
TMEM106C-209ENST00000548640 TET3O43151 1660 aa19.46■□□□□ 0.71
TMEM106C-209ENST00000548640 KDM5CP41229 1560 aa19.46■□□□□ 0.71
TMEM106C-209ENST00000548640 PLA2R1Q13018 1463 aa19.46■□□□□ 0.71
TMEM106C-209ENST00000548640 NEO1Q92859 1461 aa19.46■□□□□ 0.71
TMEM106C-209ENST00000548640 DCAF11Q8TEB1 546 aa19.45■□□□□ 0.7
TMEM106C-209ENST00000548640 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
TMEM106C-209ENST00000548640 POGZQ7Z3K3 1410 aa19.44■□□□□ 0.7
TMEM106C-209ENST00000548640 VWDEQ8N2E2 1590 aa19.44■□□□□ 0.7
TMEM106C-209ENST00000548640 TRPM2O94759 1503 aa19.43■□□□□ 0.7
TMEM106C-209ENST00000548640 PRDM15P57071 1507 aaPredicted RBP19.43■□□□□ 0.7
TMEM106C-209ENST00000548640 CARD11Q9BXL7 1154 aa19.43■□□□□ 0.7
TMEM106C-209ENST00000548640 PRAG1Q86YV5 1406 aa19.42■□□□□ 0.7
TMEM106C-209ENST00000548640 STAC3Q96MF2 364 aa19.42■□□□□ 0.7
TMEM106C-209ENST00000548640 ROCK2O75116 1388 aaKnown RBP19.42■□□□□ 0.7
TMEM106C-209ENST00000548640 KDM2AQ9Y2K7 1162 aa19.41■□□□□ 0.7
TMEM106C-209ENST00000548640 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
TMEM106C-209ENST00000548640 LAMC1P11047 1609 aa19.4■□□□□ 0.7
TMEM106C-209ENST00000548640 E9PCH4 1651 aa19.4■□□□□ 0.7
TMEM106C-209ENST00000548640 KIDINS220Q9ULH0 1771 aa19.4■□□□□ 0.7
TMEM106C-209ENST00000548640 KIF7Q2M1P5 1343 aa19.4■□□□□ 0.7
TMEM106C-209ENST00000548640 A2MP01023 1474 aa19.4■□□□□ 0.7
TMEM106C-209ENST00000548640 HECW2Q9P2P5 1572 aa19.4■□□□□ 0.7
TMEM106C-209ENST00000548640 PTPRTO14522 1441 aa19.39■□□□□ 0.69
TMEM106C-209ENST00000548640 TRPM1Q7Z4N2 1603 aa19.39■□□□□ 0.69
TMEM106C-209ENST00000548640 SPHKAPQ2M3C7 1700 aa19.39■□□□□ 0.69
TMEM106C-209ENST00000548640 KIF3BO15066 747 aa19.38■□□□□ 0.69
TMEM106C-209ENST00000548640 GLI2P10070 1586 aa19.37■□□□□ 0.69
TMEM106C-209ENST00000548640 RNF17Q9BXT8 1623 aaKnown RBP19.36■□□□□ 0.69
TMEM106C-209ENST00000548640 NEURL4Q96JN8 1562 aa19.36■□□□□ 0.69
TMEM106C-209ENST00000548640 GPRASP1Q5JY77 1395 aa19.36■□□□□ 0.69
TMEM106C-209ENST00000548640 LMTK2Q8IWU2 1503 aa19.35■□□□□ 0.69
TMEM106C-209ENST00000548640 CEP152O94986 1710 aa19.34■□□□□ 0.69
TMEM106C-209ENST00000548640 RGL3Q3MIN7 710 aa19.34■□□□□ 0.69
TMEM106C-209ENST00000548640 MROH1Q8NDA8 1641 aa19.33■□□□□ 0.69
TMEM106C-209ENST00000548640 C11orf95C9JLR9 678 aaPredicted RBP19.33■□□□□ 0.68
TMEM106C-209ENST00000548640 EFCAB6Q5THR3 1501 aa19.32■□□□□ 0.68
TMEM106C-209ENST00000548640 BCORL1Q5H9F3 1711 aa19.32■□□□□ 0.68
TMEM106C-209ENST00000548640 RIMBP3CA6NJZ7 1639 aa19.32■□□□□ 0.68
TMEM106C-209ENST00000548640 RIMBP3BA6NNM3 1639 aa19.32■□□□□ 0.68
TMEM106C-209ENST00000548640 RIMBP3Q9UFD9 1639 aa19.32■□□□□ 0.68
TMEM106C-209ENST00000548640 MAP3K4Q9Y6R4 1608 aa19.32■□□□□ 0.68
TMEM106C-209ENST00000548640 CLTCL1P53675 1640 aa19.29■□□□□ 0.68
TMEM106C-209ENST00000548640 PRKRIP1Q9H875 184 aaPredicted RBP19.27■□□□□ 0.68
TMEM106C-209ENST00000548640 ABCA6Q8N139 1617 aa19.26■□□□□ 0.67
TMEM106C-209ENST00000548640 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
TMEM106C-209ENST00000548640 ST20-MTHFSA0A0A6YYL1 179 aa19.25■□□□□ 0.67
TMEM106C-209ENST00000548640 MADDQ8WXG6 1647 aa19.25■□□□□ 0.67
TMEM106C-209ENST00000548640 FRMPD1Q5SYB0 1578 aa19.24■□□□□ 0.67
TMEM106C-209ENST00000548640 POLR3GLQ9BT43 218 aa19.24■□□□□ 0.67
TMEM106C-209ENST00000548640 PPRC1Q5VV67 1664 aaKnown RBP19.24■□□□□ 0.67
TMEM106C-209ENST00000548640 DIP2CQ9Y2E4 1556 aa19.22■□□□□ 0.67
TMEM106C-209ENST00000548640 RICTORQ6R327 1708 aa19.22■□□□□ 0.67
TMEM106C-209ENST00000548640 KTN1Q86UP2 1357 aaKnown RBP19.21■□□□□ 0.67
TMEM106C-209ENST00000548640 KIF1BO60333 1816 aa19.21■□□□□ 0.67
TMEM106C-209ENST00000548640 MYOM2P54296 1465 aa19.21■□□□□ 0.67
TMEM106C-209ENST00000548640 KIAA1210Q9ULL0 1709 aa19.2■□□□□ 0.66
TMEM106C-209ENST00000548640 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
TMEM106C-209ENST00000548640 COL17A1Q9UMD9 1497 aaPredicted RBP19.19■□□□□ 0.66
TMEM106C-209ENST00000548640 ZC3H13Q5T200 1668 aaKnown RBP19.18■□□□□ 0.66
TMEM106C-209ENST00000548640 NBPF1Q3BBV0 1214 aa19.18■□□□□ 0.66
TMEM106C-209ENST00000548640 ABCC3O15438 1527 aa19.18■□□□□ 0.66
TMEM106C-209ENST00000548640 ZMYM4Q5VZL5 1548 aa19.18■□□□□ 0.66
TMEM106C-209ENST00000548640 EIF3AQ14152 1382 aaKnown RBP19.18■□□□□ 0.66
TMEM106C-209ENST00000548640 SLC24A1O60721 1099 aa19.16■□□□□ 0.66
TMEM106C-209ENST00000548640 TMF1P82094 1093 aa19.16■□□□□ 0.66
TMEM106C-209ENST00000548640 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
TMEM106C-209ENST00000548640 RAPGEF3O95398 923 aa19.15■□□□□ 0.66
TMEM106C-209ENST00000548640 GGT6Q6P531 493 aa19.15■□□□□ 0.66
TMEM106C-209ENST00000548640 WASHC2CQ9Y4E1 1318 aa19.15■□□□□ 0.66
TMEM106C-209ENST00000548640 SCAF11Q99590 1463 aaKnown RBP19.15■□□□□ 0.66
TMEM106C-209ENST00000548640 IQGAP1P46940 1657 aa19.14■□□□□ 0.66
TMEM106C-209ENST00000548640 FAM69CQ0P6D2 419 aa19.14■□□□□ 0.65
TMEM106C-209ENST00000548640 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.65
TMEM106C-209ENST00000548640 CDCA8Q53HL2 280 aa19.13■□□□□ 0.65
TMEM106C-209ENST00000548640 NPATQ14207 1427 aa19.13■□□□□ 0.65
TMEM106C-209ENST00000548640 ADGRB3O60242 1522 aa19.13■□□□□ 0.65
TMEM106C-209ENST00000548640 ARHGAP31Q2M1Z3 1444 aa19.12■□□□□ 0.65
TMEM106C-209ENST00000548640 RPGRIP1LQ68CZ1 1315 aa19.11■□□□□ 0.65
TMEM106C-209ENST00000548640 HNRNPUQ00839 825 aaKnown RBP eCLIP19.11■□□□□ 0.65
TMEM106C-209ENST00000548640 RALBP1Q15311 655 aa19.11■□□□□ 0.65
TMEM106C-209ENST00000548640 IFT172Q9UG01 1749 aa19.11■□□□□ 0.65
TMEM106C-209ENST00000548640 TESK2Q96S53 571 aa19.09■□□□□ 0.65
TMEM106C-209ENST00000548640 UGGT1Q9NYU2 1555 aa19.08■□□□□ 0.65
TMEM106C-209ENST00000548640 REREQ9P2R6 1566 aa19.08■□□□□ 0.65
TMEM106C-209ENST00000548640 NEFLP07196 543 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms