RNA–Protein interactions for RNA: ENST00000548629.5

MMP19-206, Transcript of matrix metallopeptidase 19, humanhuman

TSL 5 BASIC

Gene MMP19, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-206ENST00000548629 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
MMP19-206ENST00000548629 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
MMP19-206ENST00000548629 KDM5CP41229 1560 aa17.59■□□□□ 0.41
MMP19-206ENST00000548629 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.41
MMP19-206ENST00000548629 SAMD9LQ8IVG5 1584 aa17.58■□□□□ 0.41
MMP19-206ENST00000548629 ERICH6BQ5W0A0 696 aa17.58■□□□□ 0.4
MMP19-206ENST00000548629 MAST1Q9Y2H9 1570 aa17.58■□□□□ 0.4
MMP19-206ENST00000548629 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
MMP19-206ENST00000548629 PKD2Q13563 968 aa17.56■□□□□ 0.4
MMP19-206ENST00000548629 ROCK2O75116 1388 aaKnown RBP17.56■□□□□ 0.4
MMP19-206ENST00000548629 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
MMP19-206ENST00000548629 NUP155O75694 1391 aa17.54■□□□□ 0.4
MMP19-206ENST00000548629 USP47Q96K76 1375 aa17.54■□□□□ 0.4
MMP19-206ENST00000548629 KIF15Q9NS87 1388 aa17.54■□□□□ 0.4
MMP19-206ENST00000548629 MYT1LQ9UL68 1186 aa17.54■□□□□ 0.4
MMP19-206ENST00000548629 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
MMP19-206ENST00000548629 AFAP1Q8N556 730 aa17.54■□□□□ 0.4
MMP19-206ENST00000548629 SCAPERQ9BY12 1400 aa17.53■□□□□ 0.4
MMP19-206ENST00000548629 UNC13BO14795 1591 aa17.52■□□□□ 0.39
MMP19-206ENST00000548629 C11orf95C9JLR9 678 aaPredicted RBP17.51■□□□□ 0.39
MMP19-206ENST00000548629 BCANQ96GW7 911 aa17.51■□□□□ 0.39
MMP19-206ENST00000548629 PLXNC1O60486 1568 aa17.51■□□□□ 0.39
MMP19-206ENST00000548629 ADGRL1O94910 1474 aa17.51■□□□□ 0.39
MMP19-206ENST00000548629 ZBED9Q6R2W3 1325 aa17.51■□□□□ 0.39
MMP19-206ENST00000548629 BCORL1Q5H9F3 1711 aa17.51■□□□□ 0.39
MMP19-206ENST00000548629 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
MMP19-206ENST00000548629 ABCC1P33527 1531 aa17.49■□□□□ 0.39
MMP19-206ENST00000548629 MRS2Q9HD23 443 aa17.49■□□□□ 0.39
MMP19-206ENST00000548629 TRAPPC8Q9Y2L5 1435 aa17.49■□□□□ 0.39
MMP19-206ENST00000548629 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
MMP19-206ENST00000548629 RTEL1-TNFRSF6BF6WH68 1400 aa17.48■□□□□ 0.39
MMP19-206ENST00000548629 NEO1Q92859 1461 aa17.46■□□□□ 0.39
MMP19-206ENST00000548629 KTN1Q86UP2 1357 aaKnown RBP17.46■□□□□ 0.39
MMP19-206ENST00000548629 CFAP74Q9C0B2 1584 aa17.45■□□□□ 0.38
MMP19-206ENST00000548629 DHX29Q7Z478 1369 aaKnown RBP17.45■□□□□ 0.38
MMP19-206ENST00000548629 LAMC1P11047 1609 aa17.45■□□□□ 0.38
MMP19-206ENST00000548629 IQGAP3Q86VI3 1631 aa17.44■□□□□ 0.38
MMP19-206ENST00000548629 KDM4FA0A1W2PPD8 638 aa17.43■□□□□ 0.38
MMP19-206ENST00000548629 E9PCH4 1651 aa17.43■□□□□ 0.38
MMP19-206ENST00000548629 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
MMP19-206ENST00000548629 TRPM1Q7Z4N2 1603 aa17.41■□□□□ 0.38
MMP19-206ENST00000548629 EIF2AK4Q9P2K8 1649 aaKnown RBP17.41■□□□□ 0.38
MMP19-206ENST00000548629 DUOX2Q9NRD8 1548 aa17.4■□□□□ 0.38
MMP19-206ENST00000548629 CCDC144AA2RUR9 1427 aa17.4■□□□□ 0.38
MMP19-206ENST00000548629 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
MMP19-206ENST00000548629 CARD11Q9BXL7 1154 aa17.4■□□□□ 0.38
MMP19-206ENST00000548629 ZNF326Q5BKZ1 582 aaKnown RBP17.39■□□□□ 0.37
MMP19-206ENST00000548629 RAPGEF3O95398 923 aa17.38■□□□□ 0.37
MMP19-206ENST00000548629 MAGI2Q86UL8 1455 aa17.38■□□□□ 0.37
MMP19-206ENST00000548629 ERBINQ96RT1 1412 aa17.38■□□□□ 0.37
MMP19-206ENST00000548629 CCDC184Q52MB2 194 aa17.37■□□□□ 0.37
MMP19-206ENST00000548629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.37■□□□□ 0.37
MMP19-206ENST00000548629 POGZQ7Z3K3 1410 aa17.37■□□□□ 0.37
MMP19-206ENST00000548629 ATP10AO60312 1499 aa17.36■□□□□ 0.37
MMP19-206ENST00000548629 PPP4R2Q9NY27 417 aa17.35■□□□□ 0.37
MMP19-206ENST00000548629 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
MMP19-206ENST00000548629 PRAG1Q86YV5 1406 aa17.35■□□□□ 0.37
MMP19-206ENST00000548629 ATP7AQ04656 1500 aa17.34■□□□□ 0.37
MMP19-206ENST00000548629 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
MMP19-206ENST00000548629 MLH3Q9UHC1 1453 aa17.33■□□□□ 0.36
MMP19-206ENST00000548629 KIF3BO15066 747 aa17.32■□□□□ 0.36
MMP19-206ENST00000548629 ZFYVE16Q7Z3T8 1539 aa17.32■□□□□ 0.36
MMP19-206ENST00000548629 BRD4O60885 1362 aaPredicted RBP17.32■□□□□ 0.36
MMP19-206ENST00000548629 RALBP1Q15311 655 aa17.31■□□□□ 0.36
MMP19-206ENST00000548629 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
MMP19-206ENST00000548629 PRDM15P57071 1507 aaPredicted RBP17.31■□□□□ 0.36
MMP19-206ENST00000548629 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
MMP19-206ENST00000548629 KANK1Q14678 1352 aa17.29■□□□□ 0.36
MMP19-206ENST00000548629 RNF17Q9BXT8 1623 aaKnown RBP17.28■□□□□ 0.36
MMP19-206ENST00000548629 A2MP01023 1474 aa17.28■□□□□ 0.36
MMP19-206ENST00000548629 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
MMP19-206ENST00000548629 POLR3GLQ9BT43 218 aa17.28■□□□□ 0.36
MMP19-206ENST00000548629 INO80Q9ULG1 1556 aaPredicted RBP17.27■□□□□ 0.36
MMP19-206ENST00000548629 ST20-MTHFSA0A0A6YYL1 179 aa17.27■□□□□ 0.36
MMP19-206ENST00000548629 TMC1Q8TDI8 760 aa17.26■□□□□ 0.35
MMP19-206ENST00000548629 ANP32EQ9BTT0 268 aa17.26■□□□□ 0.35
MMP19-206ENST00000548629 PLA2R1Q13018 1463 aa17.26■□□□□ 0.35
MMP19-206ENST00000548629 NUDCQ9Y266 331 aa17.26■□□□□ 0.35
MMP19-206ENST00000548629 KDM2AQ9Y2K7 1162 aa17.26■□□□□ 0.35
MMP19-206ENST00000548629 LRPPRCP42704 1394 aaKnown RBP17.25■□□□□ 0.35
MMP19-206ENST00000548629 WASHC2CQ9Y4E1 1318 aa17.25■□□□□ 0.35
MMP19-206ENST00000548629 ZMYM4Q5VZL5 1548 aa17.25■□□□□ 0.35
MMP19-206ENST00000548629 PNISRQ8TF01 805 aaKnown RBP17.23■□□□□ 0.35
MMP19-206ENST00000548629 HECW2Q9P2P5 1572 aa17.23■□□□□ 0.35
MMP19-206ENST00000548629 INSRP06213 1382 aa17.23■□□□□ 0.35
MMP19-206ENST00000548629 KIDINS220Q9ULH0 1771 aa17.22■□□□□ 0.35
MMP19-206ENST00000548629 DEPDC5O75140 1603 aa17.22■□□□□ 0.35
MMP19-206ENST00000548629 FRMPD1Q5SYB0 1578 aa17.22■□□□□ 0.35
MMP19-206ENST00000548629 GGT6Q6P531 493 aa17.21■□□□□ 0.35
MMP19-206ENST00000548629 STAC3Q96MF2 364 aa17.21■□□□□ 0.35
MMP19-206ENST00000548629 CEP152O94986 1710 aa17.21■□□□□ 0.35
MMP19-206ENST00000548629 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
MMP19-206ENST00000548629 IRX6P78412 446 aaPredicted RBP17.21■□□□□ 0.35
MMP19-206ENST00000548629 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
MMP19-206ENST00000548629 RICTORQ6R327 1708 aa17.2■□□□□ 0.34
MMP19-206ENST00000548629 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
MMP19-206ENST00000548629 TRPM2O94759 1503 aa17.2■□□□□ 0.34
MMP19-206ENST00000548629 SPHKAPQ2M3C7 1700 aa17.19■□□□□ 0.34
MMP19-206ENST00000548629 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
MMP19-206ENST00000548629 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms