RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 AGLP35573 1532 aa13.42□□□□□ -0.26
SP1-203ENST00000548560 PLXNC1O60486 1568 aa13.41□□□□□ -0.26
SP1-203ENST00000548560 A2MP01023 1474 aa13.41□□□□□ -0.26
SP1-203ENST00000548560 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
SP1-203ENST00000548560 MLECQ14165 292 aa13.39□□□□□ -0.27
SP1-203ENST00000548560 LMTK3Q96Q04 1460 aa13.39□□□□□ -0.27
SP1-203ENST00000548560 DAPK1P53355 1430 aa13.39□□□□□ -0.27
SP1-203ENST00000548560 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
SP1-203ENST00000548560 PPARGC1BQ86YN6 1023 aaKnown RBP13.38□□□□□ -0.27
SP1-203ENST00000548560 ABCC5O15440 1437 aa13.36□□□□□ -0.27
SP1-203ENST00000548560 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
SP1-203ENST00000548560 ESF1Q9H501 851 aaKnown RBP13.35□□□□□ -0.27
SP1-203ENST00000548560 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
SP1-203ENST00000548560 MROH2AA6NES4 1674 aa13.34□□□□□ -0.27
SP1-203ENST00000548560 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
SP1-203ENST00000548560 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
SP1-203ENST00000548560 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.27
SP1-203ENST00000548560 C3P01024 1663 aa13.32□□□□□ -0.28
SP1-203ENST00000548560 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
SP1-203ENST00000548560 RNF17Q9BXT8 1623 aaKnown RBP13.31□□□□□ -0.28
SP1-203ENST00000548560 ANKRD30AQ9BXX3 1397 aa13.31□□□□□ -0.28
SP1-203ENST00000548560 KIF15Q9NS87 1388 aa13.31□□□□□ -0.28
SP1-203ENST00000548560 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
SP1-203ENST00000548560 FAM135AQ9P2D6 1515 aa13.29□□□□□ -0.28
SP1-203ENST00000548560 ZC3H13Q5T200 1668 aaKnown RBP13.29□□□□□ -0.28
SP1-203ENST00000548560 GGT6Q6P531 493 aa13.29□□□□□ -0.28
SP1-203ENST00000548560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.29□□□□□ -0.28
SP1-203ENST00000548560 ERBINQ96RT1 1412 aa13.29□□□□□ -0.28
SP1-203ENST00000548560 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
SP1-203ENST00000548560 PREX1Q8TCU6 1659 aa13.28□□□□□ -0.28
SP1-203ENST00000548560 KIF3BO15066 747 aa13.28□□□□□ -0.28
SP1-203ENST00000548560 CHIC2Q9UKJ5 165 aa13.28□□□□□ -0.28
SP1-203ENST00000548560 KDM5DQ9BY66 1539 aa13.28□□□□□ -0.28
SP1-203ENST00000548560 SETD1BQ9UPS6 1966 aaKnown RBP13.27□□□□□ -0.28
SP1-203ENST00000548560 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
SP1-203ENST00000548560 CEP152O94986 1710 aa13.27□□□□□ -0.29
SP1-203ENST00000548560 FKBP8Q14318 412 aa13.26□□□□□ -0.29
SP1-203ENST00000548560 NCOA1Q15788 1441 aa13.26□□□□□ -0.29
SP1-203ENST00000548560 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
SP1-203ENST00000548560 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
SP1-203ENST00000548560 DEPDC5O75140 1603 aa13.25□□□□□ -0.29
SP1-203ENST00000548560 STRCQ7RTU9 1775 aa13.25□□□□□ -0.29
SP1-203ENST00000548560 ITGAEP38570 1179 aa13.24□□□□□ -0.29
SP1-203ENST00000548560 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
SP1-203ENST00000548560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.29
SP1-203ENST00000548560 MROH1Q8NDA8 1641 aa13.23□□□□□ -0.29
SP1-203ENST00000548560 ROCK1Q13464 1354 aa13.22□□□□□ -0.29
SP1-203ENST00000548560 CAMSAP1Q5T5Y3 1602 aa13.22□□□□□ -0.29
SP1-203ENST00000548560 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
SP1-203ENST00000548560 GCC2Q8IWJ2 1684 aa13.21□□□□□ -0.29
SP1-203ENST00000548560 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
SP1-203ENST00000548560 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.29
SP1-203ENST00000548560 FBXO41Q8TF61 875 aa13.21□□□□□ -0.29
SP1-203ENST00000548560 CFAP65Q6ZU64 1925 aaKnown RBP13.21□□□□□ -0.3
SP1-203ENST00000548560 ANKRD50Q9ULJ7 1429 aa13.21□□□□□ -0.3
SP1-203ENST00000548560 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
SP1-203ENST00000548560 ABCC3O15438 1527 aa13.2□□□□□ -0.3
SP1-203ENST00000548560 HSPA2P54652 639 aa13.2□□□□□ -0.3
SP1-203ENST00000548560 KANK1Q14678 1352 aa13.2□□□□□ -0.3
SP1-203ENST00000548560 NPATQ14207 1427 aa13.19□□□□□ -0.3
SP1-203ENST00000548560 UHRF1BP1Q6BDS2 1440 aa13.19□□□□□ -0.3
SP1-203ENST00000548560 MYO3AQ8NEV4 1616 aa13.18□□□□□ -0.3
SP1-203ENST00000548560 UNC13BO14795 1591 aa13.18□□□□□ -0.3
SP1-203ENST00000548560 PZPP20742 1482 aa13.17□□□□□ -0.3
SP1-203ENST00000548560 ZNF142P52746 1687 aaPredicted RBP13.17□□□□□ -0.3
SP1-203ENST00000548560 RTN4Q9NQC3 1192 aaKnown RBP13.16□□□□□ -0.3
SP1-203ENST00000548560 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
SP1-203ENST00000548560 TET3O43151 1660 aa13.14□□□□□ -0.31
SP1-203ENST00000548560 CEP170BQ9Y4F5 1589 aaPredicted RBP13.13□□□□□ -0.31
SP1-203ENST00000548560 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
SP1-203ENST00000548560 IQGAP3Q86VI3 1631 aa13.13□□□□□ -0.31
SP1-203ENST00000548560 EFCAB6Q5THR3 1501 aa13.13□□□□□ -0.31
SP1-203ENST00000548560 LMTK2Q8IWU2 1503 aa13.13□□□□□ -0.31
SP1-203ENST00000548560 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
SP1-203ENST00000548560 TNRQ92752 1358 aa13.11□□□□□ -0.31
SP1-203ENST00000548560 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
SP1-203ENST00000548560 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
SP1-203ENST00000548560 NAIPQ13075 1403 aa13.1□□□□□ -0.31
SP1-203ENST00000548560 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
SP1-203ENST00000548560 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
SP1-203ENST00000548560 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
SP1-203ENST00000548560 E9PCH4 1651 aa13.08□□□□□ -0.32
SP1-203ENST00000548560 FBXO31Q5XUX0 539 aaPredicted RBP13.07□□□□□ -0.32
SP1-203ENST00000548560 RPRD2Q5VT52 1461 aaKnown RBP13.07□□□□□ -0.32
SP1-203ENST00000548560 NUP155O75694 1391 aa13.07□□□□□ -0.32
SP1-203ENST00000548560 POLR1AO95602 1720 aaPredicted RBP13.06□□□□□ -0.32
SP1-203ENST00000548560 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
SP1-203ENST00000548560 CERKQ8TCT0 537 aa13.05□□□□□ -0.32
SP1-203ENST00000548560 UGGT1Q9NYU2 1555 aa13.05□□□□□ -0.32
SP1-203ENST00000548560 LTBP4Q8N2S1 1624 aa13.04□□□□□ -0.32
SP1-203ENST00000548560 SPHKAPQ2M3C7 1700 aa13.04□□□□□ -0.32
SP1-203ENST00000548560 UBR1Q8IWV7 1749 aa13.04□□□□□ -0.32
SP1-203ENST00000548560 PIK3C2BO00750 1634 aa13.03□□□□□ -0.32
SP1-203ENST00000548560 SLC24A1O60721 1099 aa13.03□□□□□ -0.32
SP1-203ENST00000548560 PLA2R1Q13018 1463 aa13.03□□□□□ -0.32
SP1-203ENST00000548560 SYNMO15061 1565 aa13.03□□□□□ -0.32
SP1-203ENST00000548560 KDM5AP29375 1690 aaKnown RBP13.02□□□□□ -0.32
SP1-203ENST00000548560 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
SP1-203ENST00000548560 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
SP1-203ENST00000548560 PTPRTO14522 1441 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms