RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 NCOA1Q15788 1441 aa9.59□□□□□ -0.87
CASC18-202ENST00000548557 DMRT2Q9Y5R5 561 aa9.58□□□□□ -0.88
CASC18-202ENST00000548557 KDM5CP41229 1560 aa9.58□□□□□ -0.88
CASC18-202ENST00000548557 MLH3Q9UHC1 1453 aa9.58□□□□□ -0.88
CASC18-202ENST00000548557 RAPGEF3O95398 923 aa9.57□□□□□ -0.88
CASC18-202ENST00000548557 ACIN1Q9UKV3 1341 aaKnown RBP9.57□□□□□ -0.88
CASC18-202ENST00000548557 SETD5Q9C0A6 1442 aa9.57□□□□□ -0.88
CASC18-202ENST00000548557 NAIPQ13075 1403 aa9.56□□□□□ -0.88
CASC18-202ENST00000548557 RRP7BPQ9NSQ0 103 aa9.56□□□□□ -0.88
CASC18-202ENST00000548557 ADGBQ8N7X0 1667 aa9.56□□□□□ -0.88
CASC18-202ENST00000548557 MAGI2Q86UL8 1455 aa9.56□□□□□ -0.88
CASC18-202ENST00000548557 PLXNC1O60486 1568 aa9.56□□□□□ -0.88
CASC18-202ENST00000548557 ZFYVE16Q7Z3T8 1539 aa9.55□□□□□ -0.88
CASC18-202ENST00000548557 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
CASC18-202ENST00000548557 KIF15Q9NS87 1388 aa9.55□□□□□ -0.88
CASC18-202ENST00000548557 RICTORQ6R327 1708 aa9.55□□□□□ -0.88
CASC18-202ENST00000548557 ATP7AQ04656 1500 aa9.55□□□□□ -0.88
CASC18-202ENST00000548557 ZMYM4Q5VZL5 1548 aa9.55□□□□□ -0.88
CASC18-202ENST00000548557 INO80Q9ULG1 1556 aaPredicted RBP9.55□□□□□ -0.88
CASC18-202ENST00000548557 COL17A1Q9UMD9 1497 aaPredicted RBP9.55□□□□□ -0.88
CASC18-202ENST00000548557 MYT1LQ9UL68 1186 aa9.54□□□□□ -0.88
CASC18-202ENST00000548557 FRMPD1Q5SYB0 1578 aa9.54□□□□□ -0.88
CASC18-202ENST00000548557 HECW2Q9P2P5 1572 aa9.54□□□□□ -0.88
CASC18-202ENST00000548557 DIEXFQ68CQ4 756 aaKnown RBP9.53□□□□□ -0.88
CASC18-202ENST00000548557 ANKRD50Q9ULJ7 1429 aa9.53□□□□□ -0.88
CASC18-202ENST00000548557 RAB3GAP2Q9H2M9 1393 aa9.53□□□□□ -0.88
CASC18-202ENST00000548557 DUOX2Q9NRD8 1548 aa9.53□□□□□ -0.88
CASC18-202ENST00000548557 GCC2Q8IWJ2 1684 aa9.52□□□□□ -0.88
CASC18-202ENST00000548557 KIDINS220Q9ULH0 1771 aa9.52□□□□□ -0.89
CASC18-202ENST00000548557 RNF216Q9NWF9 866 aaPredicted RBP9.52□□□□□ -0.89
CASC18-202ENST00000548557 ERBINQ96RT1 1412 aa9.51□□□□□ -0.89
CASC18-202ENST00000548557 DHX29Q7Z478 1369 aaKnown RBP9.51□□□□□ -0.89
CASC18-202ENST00000548557 KDM6BO15054 1643 aa9.51□□□□□ -0.89
CASC18-202ENST00000548557 FBXO3Q9UK99 471 aa9.5□□□□□ -0.89
CASC18-202ENST00000548557 TMEM132AQ24JP5 1023 aa9.5□□□□□ -0.89
CASC18-202ENST00000548557 A2MP01023 1474 aa9.49□□□□□ -0.89
CASC18-202ENST00000548557 ZNF316A6NFI3 1004 aaPredicted RBP9.49□□□□□ -0.89
CASC18-202ENST00000548557 YEATS2Q9ULM3 1422 aa9.49□□□□□ -0.89
CASC18-202ENST00000548557 ATP10AO60312 1499 aa9.48□□□□□ -0.89
CASC18-202ENST00000548557 DIP2CQ9Y2E4 1556 aa9.48□□□□□ -0.89
CASC18-202ENST00000548557 ABCA6Q8N139 1617 aa9.48□□□□□ -0.89
CASC18-202ENST00000548557 REREQ9P2R6 1566 aa9.47□□□□□ -0.89
CASC18-202ENST00000548557 ARHGEF40Q8TER5 1519 aa9.47□□□□□ -0.89
CASC18-202ENST00000548557 EIF2AK4Q9P2K8 1649 aaKnown RBP9.47□□□□□ -0.89
CASC18-202ENST00000548557 KIF3BO15066 747 aa9.46□□□□□ -0.9
CASC18-202ENST00000548557 TRIM52Q96A61 297 aa9.46□□□□□ -0.9
CASC18-202ENST00000548557 SLC4A1APQ9BWU0 796 aaKnown RBP9.46□□□□□ -0.9
CASC18-202ENST00000548557 HOXD11P31277 338 aaPredicted RBP9.45□□□□□ -0.9
CASC18-202ENST00000548557 AGLP35573 1532 aa9.45□□□□□ -0.9
CASC18-202ENST00000548557 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
CASC18-202ENST00000548557 BCORL1Q5H9F3 1711 aa9.44□□□□□ -0.9
CASC18-202ENST00000548557 NUP155O75694 1391 aa9.44□□□□□ -0.9
CASC18-202ENST00000548557 KDM5DQ9BY66 1539 aa9.44□□□□□ -0.9
CASC18-202ENST00000548557 UNC13BO14795 1591 aa9.43□□□□□ -0.9
CASC18-202ENST00000548557 DHX57Q6P158 1386 aaKnown RBP9.43□□□□□ -0.9
CASC18-202ENST00000548557 NEUROD1Q13562 356 aa9.43□□□□□ -0.9
CASC18-202ENST00000548557 KANK1Q14678 1352 aa9.43□□□□□ -0.9
CASC18-202ENST00000548557 MPHOSPH9Q99550 1183 aa9.42□□□□□ -0.9
CASC18-202ENST00000548557 CLSPNQ9HAW4 1339 aa9.42□□□□□ -0.9
CASC18-202ENST00000548557 DEPDC5O75140 1603 aa9.42□□□□□ -0.9
CASC18-202ENST00000548557 PRDM15P57071 1507 aaPredicted RBP9.41□□□□□ -0.9
CASC18-202ENST00000548557 RNF17Q9BXT8 1623 aaKnown RBP9.41□□□□□ -0.9
CASC18-202ENST00000548557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.41□□□□□ -0.9
CASC18-202ENST00000548557 GGT6Q6P531 493 aa9.41□□□□□ -0.9
CASC18-202ENST00000548557 CENPBP07199 599 aaPredicted RBP9.4□□□□□ -0.9
CASC18-202ENST00000548557 PZPP20742 1482 aa9.4□□□□□ -0.9
CASC18-202ENST00000548557 VWDEQ8N2E2 1590 aa9.4□□□□□ -0.91
CASC18-202ENST00000548557 FAM135AQ9P2D6 1515 aa9.4□□□□□ -0.91
CASC18-202ENST00000548557 IQGAP3Q86VI3 1631 aa9.39□□□□□ -0.91
CASC18-202ENST00000548557 MROH1Q8NDA8 1641 aa9.39□□□□□ -0.91
CASC18-202ENST00000548557 ARID4BQ4LE39 1312 aaPredicted RBP9.38□□□□□ -0.91
CASC18-202ENST00000548557 WASHC2CQ9Y4E1 1318 aa9.38□□□□□ -0.91
CASC18-202ENST00000548557 LMTK2Q8IWU2 1503 aa9.38□□□□□ -0.91
CASC18-202ENST00000548557 PKD2Q13563 968 aa9.38□□□□□ -0.91
CASC18-202ENST00000548557 SIGLEC1Q9BZZ2 1709 aa9.36□□□□□ -0.91
CASC18-202ENST00000548557 ZC3H13Q5T200 1668 aaKnown RBP9.36□□□□□ -0.91
CASC18-202ENST00000548557 TET3O43151 1660 aa9.35□□□□□ -0.91
CASC18-202ENST00000548557 ABCC3O15438 1527 aa9.35□□□□□ -0.91
CASC18-202ENST00000548557 RPRD2Q5VT52 1461 aaKnown RBP9.35□□□□□ -0.91
CASC18-202ENST00000548557 ARHGAP31Q2M1Z3 1444 aa9.35□□□□□ -0.91
CASC18-202ENST00000548557 UBE2Q2Q8WVN8 375 aa9.35□□□□□ -0.91
CASC18-202ENST00000548557 ESF1Q9H501 851 aaKnown RBP9.35□□□□□ -0.91
CASC18-202ENST00000548557 ANKRD30BQ9BXX2 1392 aa9.34□□□□□ -0.91
CASC18-202ENST00000548557 CNTLNQ9NXG0 1405 aa9.34□□□□□ -0.91
CASC18-202ENST00000548557 MLECQ14165 292 aa9.34□□□□□ -0.91
CASC18-202ENST00000548557 EFCAB6Q5THR3 1501 aa9.33□□□□□ -0.92
CASC18-202ENST00000548557 MIER1Q8N108 512 aa9.33□□□□□ -0.92
CASC18-202ENST00000548557 NPATQ14207 1427 aa9.32□□□□□ -0.92
CASC18-202ENST00000548557 CEP152O94986 1710 aa9.31□□□□□ -0.92
CASC18-202ENST00000548557 PTPRTO14522 1441 aa9.31□□□□□ -0.92
CASC18-202ENST00000548557 CHMP4AQ9BY43 222 aa9.31□□□□□ -0.92
CASC18-202ENST00000548557 E9PCH4 1651 aa9.31□□□□□ -0.92
CASC18-202ENST00000548557 CAMSAP1Q5T5Y3 1602 aa9.31□□□□□ -0.92
CASC18-202ENST00000548557 ZMYM3Q14202 1370 aa9.3□□□□□ -0.92
CASC18-202ENST00000548557 PLA2R1Q13018 1463 aa9.29□□□□□ -0.92
CASC18-202ENST00000548557 CCDC144AA2RUR9 1427 aa9.29□□□□□ -0.92
CASC18-202ENST00000548557 CLTCQ00610 1675 aaKnown RBP9.29□□□□□ -0.92
CASC18-202ENST00000548557 NOS1P29475 1434 aa9.28□□□□□ -0.92
CASC18-202ENST00000548557 TRPM2O94759 1503 aa9.28□□□□□ -0.92
CASC18-202ENST00000548557 MROH2AA6NES4 1674 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms