RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 KIDINS220Q9ULH0 1771 aa11.18□□□□□ -0.62
TMEM106C-208ENST00000548355 HECW2Q9P2P5 1572 aa11.18□□□□□ -0.62
TMEM106C-208ENST00000548355 TEX14Q8IWB6 1497 aa11.18□□□□□ -0.62
TMEM106C-208ENST00000548355 EIF2AK4Q9P2K8 1649 aaKnown RBP11.17□□□□□ -0.62
TMEM106C-208ENST00000548355 L3MBTL2Q969R5 705 aa11.17□□□□□ -0.62
TMEM106C-208ENST00000548355 A2MP01023 1474 aa11.17□□□□□ -0.62
TMEM106C-208ENST00000548355 KANK1Q14678 1352 aa11.16□□□□□ -0.62
TMEM106C-208ENST00000548355 KIF3BO15066 747 aa11.16□□□□□ -0.62
TMEM106C-208ENST00000548355 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
TMEM106C-208ENST00000548355 DIEXFQ68CQ4 756 aaKnown RBP11.16□□□□□ -0.62
TMEM106C-208ENST00000548355 DEPDC5O75140 1603 aa11.16□□□□□ -0.62
TMEM106C-208ENST00000548355 RICTORQ6R327 1708 aa11.13□□□□□ -0.63
TMEM106C-208ENST00000548355 ABCA6Q8N139 1617 aa11.13□□□□□ -0.63
TMEM106C-208ENST00000548355 CCDC144AA2RUR9 1427 aa11.12□□□□□ -0.63
TMEM106C-208ENST00000548355 PPRC1Q5VV67 1664 aaKnown RBP11.12□□□□□ -0.63
TMEM106C-208ENST00000548355 PRDM15P57071 1507 aaPredicted RBP11.12□□□□□ -0.63
TMEM106C-208ENST00000548355 TSPOAP1O95153 1857 aa11.12□□□□□ -0.63
TMEM106C-208ENST00000548355 VWDEQ8N2E2 1590 aa11.11□□□□□ -0.63
TMEM106C-208ENST00000548355 ATP10AO60312 1499 aa11.11□□□□□ -0.63
TMEM106C-208ENST00000548355 FRMPD1Q5SYB0 1578 aa11.11□□□□□ -0.63
TMEM106C-208ENST00000548355 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
TMEM106C-208ENST00000548355 RNF17Q9BXT8 1623 aaKnown RBP11.1□□□□□ -0.63
TMEM106C-208ENST00000548355 KIF13AQ9H1H9 1805 aa11.1□□□□□ -0.63
TMEM106C-208ENST00000548355 TET3O43151 1660 aa11.1□□□□□ -0.63
TMEM106C-208ENST00000548355 ZMYM4Q5VZL5 1548 aa11.09□□□□□ -0.63
TMEM106C-208ENST00000548355 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
TMEM106C-208ENST00000548355 PLA2R1Q13018 1463 aa11.09□□□□□ -0.63
TMEM106C-208ENST00000548355 E9PCH4 1651 aa11.08□□□□□ -0.64
TMEM106C-208ENST00000548355 BCORL1Q5H9F3 1711 aa11.08□□□□□ -0.64
TMEM106C-208ENST00000548355 YEATS2Q9ULM3 1422 aa11.08□□□□□ -0.64
TMEM106C-208ENST00000548355 NBPF8Q3BBV2 869 aa11.07□□□□□ -0.64
TMEM106C-208ENST00000548355 GGT6Q6P531 493 aa11.07□□□□□ -0.64
TMEM106C-208ENST00000548355 LMTK2Q8IWU2 1503 aa11.07□□□□□ -0.64
TMEM106C-208ENST00000548355 TRPM2O94759 1503 aa11.06□□□□□ -0.64
TMEM106C-208ENST00000548355 PTPRTO14522 1441 aa11.06□□□□□ -0.64
TMEM106C-208ENST00000548355 EFCAB6Q5THR3 1501 aa11.05□□□□□ -0.64
TMEM106C-208ENST00000548355 EIF4G2P78344 907 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM106C-208ENST00000548355 ZNF326Q5BKZ1 582 aaKnown RBP11.05□□□□□ -0.64
TMEM106C-208ENST00000548355 UHRF1BP1Q6BDS2 1440 aa11.05□□□□□ -0.64
TMEM106C-208ENST00000548355 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
TMEM106C-208ENST00000548355 WASHC2CQ9Y4E1 1318 aa11.05□□□□□ -0.64
TMEM106C-208ENST00000548355 SPHKAPQ2M3C7 1700 aa11.04□□□□□ -0.64
TMEM106C-208ENST00000548355 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
TMEM106C-208ENST00000548355 CEP152O94986 1710 aa11.04□□□□□ -0.64
TMEM106C-208ENST00000548355 RGL3Q3MIN7 710 aa11.03□□□□□ -0.64
TMEM106C-208ENST00000548355 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
TMEM106C-208ENST00000548355 ABCC3O15438 1527 aa11.03□□□□□ -0.64
TMEM106C-208ENST00000548355 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.65
TMEM106C-208ENST00000548355 REREQ9P2R6 1566 aa11.02□□□□□ -0.65
TMEM106C-208ENST00000548355 COL17A1Q9UMD9 1497 aaPredicted RBP11.01□□□□□ -0.65
TMEM106C-208ENST00000548355 CLTCL1P53675 1640 aa11.01□□□□□ -0.65
TMEM106C-208ENST00000548355 RALGAPBQ86X10 1494 aa11□□□□□ -0.65
TMEM106C-208ENST00000548355 ZC3H13Q5T200 1668 aaKnown RBP11□□□□□ -0.65
TMEM106C-208ENST00000548355 SPATA31E1Q6ZUB1 1445 aa11□□□□□ -0.65
TMEM106C-208ENST00000548355 AGLP35573 1532 aa10.99□□□□□ -0.65
TMEM106C-208ENST00000548355 CAMSAP1Q5T5Y3 1602 aa10.99□□□□□ -0.65
TMEM106C-208ENST00000548355 TRHP20396 242 aaPredicted RBP10.99□□□□□ -0.65
TMEM106C-208ENST00000548355 NPATQ14207 1427 aa10.99□□□□□ -0.65
TMEM106C-208ENST00000548355 PRAG1Q86YV5 1406 aa10.99□□□□□ -0.65
TMEM106C-208ENST00000548355 ARHGEF40Q8TER5 1519 aa10.99□□□□□ -0.65
TMEM106C-208ENST00000548355 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
TMEM106C-208ENST00000548355 PPP6R1Q9UPN7 881 aa10.98□□□□□ -0.65
TMEM106C-208ENST00000548355 CNTLNQ9NXG0 1405 aa10.98□□□□□ -0.65
TMEM106C-208ENST00000548355 NEURL4Q96JN8 1562 aa10.98□□□□□ -0.65
TMEM106C-208ENST00000548355 DDX10Q13206 875 aaKnown RBP10.97□□□□□ -0.65
TMEM106C-208ENST00000548355 MIER1Q8N108 512 aa10.97□□□□□ -0.65
TMEM106C-208ENST00000548355 CARD11Q9BXL7 1154 aa10.97□□□□□ -0.65
TMEM106C-208ENST00000548355 ARHGAP31Q2M1Z3 1444 aa10.97□□□□□ -0.65
TMEM106C-208ENST00000548355 ROCK2O75116 1388 aaKnown RBP10.96□□□□□ -0.65
TMEM106C-208ENST00000548355 USP47Q96K76 1375 aa10.96□□□□□ -0.65
TMEM106C-208ENST00000548355 UGGT1Q9NYU2 1555 aa10.95□□□□□ -0.66
TMEM106C-208ENST00000548355 TRPM1Q7Z4N2 1603 aa10.95□□□□□ -0.66
TMEM106C-208ENST00000548355 NOS1P29475 1434 aa10.94□□□□□ -0.66
TMEM106C-208ENST00000548355 KIF1BO60333 1816 aa10.94□□□□□ -0.66
TMEM106C-208ENST00000548355 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
TMEM106C-208ENST00000548355 WASHC2AQ641Q2 1341 aa10.92□□□□□ -0.66
TMEM106C-208ENST00000548355 MLECQ14165 292 aa10.92□□□□□ -0.66
TMEM106C-208ENST00000548355 ADGRB3O60242 1522 aa10.92□□□□□ -0.66
TMEM106C-208ENST00000548355 GPRASP1Q5JY77 1395 aa10.91□□□□□ -0.66
TMEM106C-208ENST00000548355 MADDQ8WXG6 1647 aa10.91□□□□□ -0.66
TMEM106C-208ENST00000548355 ESF1Q9H501 851 aaKnown RBP10.91□□□□□ -0.66
TMEM106C-208ENST00000548355 SLC52A1Q9NWF4 448 aa10.91□□□□□ -0.66
TMEM106C-208ENST00000548355 SIGLEC1Q9BZZ2 1709 aa10.91□□□□□ -0.66
TMEM106C-208ENST00000548355 MYOM2P54296 1465 aa10.91□□□□□ -0.66
TMEM106C-208ENST00000548355 LAMC1P11047 1609 aa10.91□□□□□ -0.66
TMEM106C-208ENST00000548355 CCDC7Q96M83 1385 aa10.9□□□□□ -0.66
TMEM106C-208ENST00000548355 SYNMO15061 1565 aa10.9□□□□□ -0.66
TMEM106C-208ENST00000548355 ARID4BQ4LE39 1312 aaPredicted RBP10.9□□□□□ -0.66
TMEM106C-208ENST00000548355 MROH2AA6NES4 1674 aa10.9□□□□□ -0.66
TMEM106C-208ENST00000548355 NBPF1Q3BBV0 1214 aa10.9□□□□□ -0.66
TMEM106C-208ENST00000548355 RPGRIP1LQ68CZ1 1315 aa10.89□□□□□ -0.67
TMEM106C-208ENST00000548355 CLTCQ00610 1675 aaKnown RBP10.89□□□□□ -0.67
TMEM106C-208ENST00000548355 PREX1Q8TCU6 1659 aa10.89□□□□□ -0.67
TMEM106C-208ENST00000548355 PIK3C2BO00750 1634 aa10.89□□□□□ -0.67
TMEM106C-208ENST00000548355 C11orf95C9JLR9 678 aaPredicted RBP10.89□□□□□ -0.67
TMEM106C-208ENST00000548355 ST20-MTHFSA0A0A6YYL1 179 aa10.88□□□□□ -0.67
TMEM106C-208ENST00000548355 CFAP65Q6ZU64 1925 aaKnown RBP10.88□□□□□ -0.67
TMEM106C-208ENST00000548355 ERVK-7P63135 1459 aa10.87□□□□□ -0.67
TMEM106C-208ENST00000548355 KIF7Q2M1P5 1343 aa10.87□□□□□ -0.67
TMEM106C-208ENST00000548355 IFT172Q9UG01 1749 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms