RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 PRAG1Q86YV5 1406 aa9.89□□□□□ -0.83
PDZRN4-204ENST00000548316 ARAP3Q8WWN8 1544 aa9.89□□□□□ -0.83
PDZRN4-204ENST00000548316 NUP155O75694 1391 aa9.89□□□□□ -0.83
PDZRN4-204ENST00000548316 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
PDZRN4-204ENST00000548316 EIF2AK4Q9P2K8 1649 aaKnown RBP9.89□□□□□ -0.83
PDZRN4-204ENST00000548316 DUOX2Q9NRD8 1548 aa9.89□□□□□ -0.83
PDZRN4-204ENST00000548316 SMG6Q86US8 1419 aaKnown RBP9.89□□□□□ -0.83
PDZRN4-204ENST00000548316 RNF123Q5XPI4 1314 aa9.89□□□□□ -0.83
PDZRN4-204ENST00000548316 IQGAP1P46940 1657 aa9.88□□□□□ -0.83
PDZRN4-204ENST00000548316 A2MP01023 1474 aa9.88□□□□□ -0.83
PDZRN4-204ENST00000548316 PLEKHH2Q8IVE3 1493 aa9.88□□□□□ -0.83
PDZRN4-204ENST00000548316 ROCK2O75116 1388 aaKnown RBP9.88□□□□□ -0.83
PDZRN4-204ENST00000548316 BCANQ96GW7 911 aa9.88□□□□□ -0.83
PDZRN4-204ENST00000548316 CEP152O94986 1710 aa9.88□□□□□ -0.83
PDZRN4-204ENST00000548316 LRPPRCP42704 1394 aaKnown RBP9.88□□□□□ -0.83
PDZRN4-204ENST00000548316 SPHKAPQ2M3C7 1700 aa9.87□□□□□ -0.83
PDZRN4-204ENST00000548316 VWDEQ8N2E2 1590 aa9.86□□□□□ -0.83
PDZRN4-204ENST00000548316 ERBINQ96RT1 1412 aa9.86□□□□□ -0.83
PDZRN4-204ENST00000548316 ARHGAP5Q13017 1502 aa9.86□□□□□ -0.83
PDZRN4-204ENST00000548316 RSPH4AQ5TD94 716 aa9.86□□□□□ -0.83
PDZRN4-204ENST00000548316 NEURL4Q96JN8 1562 aa9.86□□□□□ -0.83
PDZRN4-204ENST00000548316 MADDQ8WXG6 1647 aa9.86□□□□□ -0.83
PDZRN4-204ENST00000548316 NEFLP07196 543 aa9.85□□□□□ -0.83
PDZRN4-204ENST00000548316 COL17A1Q9UMD9 1497 aaPredicted RBP9.85□□□□□ -0.83
PDZRN4-204ENST00000548316 ABCA9Q8IUA7 1624 aa9.85□□□□□ -0.83
PDZRN4-204ENST00000548316 HNRNPMP52272 730 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDZRN4-204ENST00000548316 ZNF777Q9ULD5 760 aaPredicted RBP9.84□□□□□ -0.83
PDZRN4-204ENST00000548316 KTN1Q86UP2 1357 aaKnown RBP9.84□□□□□ -0.83
PDZRN4-204ENST00000548316 ZMYM4Q5VZL5 1548 aa9.84□□□□□ -0.83
PDZRN4-204ENST00000548316 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
PDZRN4-204ENST00000548316 PLCH2O75038 1416 aa9.84□□□□□ -0.83
PDZRN4-204ENST00000548316 KIAA1210Q9ULL0 1709 aa9.83□□□□□ -0.84
PDZRN4-204ENST00000548316 ZFYVE16Q7Z3T8 1539 aa9.83□□□□□ -0.84
PDZRN4-204ENST00000548316 RBM19Q9Y4C8 960 aaKnown RBP9.83□□□□□ -0.84
PDZRN4-204ENST00000548316 IFT172Q9UG01 1749 aa9.83□□□□□ -0.84
PDZRN4-204ENST00000548316 FBLN2P98095 1184 aa9.82□□□□□ -0.84
PDZRN4-204ENST00000548316 MRS2Q9HD23 443 aa9.82□□□□□ -0.84
PDZRN4-204ENST00000548316 TET3O43151 1660 aa9.82□□□□□ -0.84
PDZRN4-204ENST00000548316 INSRP06213 1382 aa9.82□□□□□ -0.84
PDZRN4-204ENST00000548316 MROH1Q8NDA8 1641 aa9.82□□□□□ -0.84
PDZRN4-204ENST00000548316 TRPM2O94759 1503 aa9.81□□□□□ -0.84
PDZRN4-204ENST00000548316 PARD3Q8TEW0 1356 aa9.81□□□□□ -0.84
PDZRN4-204ENST00000548316 PNISRQ8TF01 805 aaKnown RBP9.81□□□□□ -0.84
PDZRN4-204ENST00000548316 MYOM1P52179 1685 aa9.81□□□□□ -0.84
PDZRN4-204ENST00000548316 CLTCL1P53675 1640 aa9.8□□□□□ -0.84
PDZRN4-204ENST00000548316 TSPY4P0CV99 314 aa9.8□□□□□ -0.84
PDZRN4-204ENST00000548316 TSPY10P0CW01 314 aa9.8□□□□□ -0.84
PDZRN4-204ENST00000548316 BRD4O60885 1362 aaPredicted RBP9.8□□□□□ -0.84
PDZRN4-204ENST00000548316 PPP4R2Q9NY27 417 aa9.8□□□□□ -0.84
PDZRN4-204ENST00000548316 RTEL1-TNFRSF6BF6WH68 1400 aa9.79□□□□□ -0.84
PDZRN4-204ENST00000548316 PTPRTO14522 1441 aa9.79□□□□□ -0.84
PDZRN4-204ENST00000548316 ANP32EQ9BTT0 268 aa9.79□□□□□ -0.84
PDZRN4-204ENST00000548316 CCDC144AA2RUR9 1427 aa9.78□□□□□ -0.84
PDZRN4-204ENST00000548316 TRAPPC8Q9Y2L5 1435 aa9.77□□□□□ -0.84
PDZRN4-204ENST00000548316 FANCIQ9NVI1 1328 aa9.77□□□□□ -0.84
PDZRN4-204ENST00000548316 FAM9BQ8IZU0 186 aa9.77□□□□□ -0.85
PDZRN4-204ENST00000548316 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
PDZRN4-204ENST00000548316 TESK2Q96S53 571 aa9.77□□□□□ -0.85
PDZRN4-204ENST00000548316 ST20-MTHFSA0A0A6YYL1 179 aa9.76□□□□□ -0.85
PDZRN4-204ENST00000548316 BLMP54132 1417 aaPredicted RBP9.76□□□□□ -0.85
PDZRN4-204ENST00000548316 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
PDZRN4-204ENST00000548316 MSH5O43196 834 aa9.76□□□□□ -0.85
PDZRN4-204ENST00000548316 NUDCQ9Y266 331 aa9.76□□□□□ -0.85
PDZRN4-204ENST00000548316 SYNMO15061 1565 aa9.76□□□□□ -0.85
PDZRN4-204ENST00000548316 WDR7Q9Y4E6 1490 aa9.75□□□□□ -0.85
PDZRN4-204ENST00000548316 MYBBP1AQ9BQG0 1328 aaKnown RBP9.75□□□□□ -0.85
PDZRN4-204ENST00000548316 MYO3AQ8NEV4 1616 aa9.75□□□□□ -0.85
PDZRN4-204ENST00000548316 DISP3Q9P2K9 1392 aa9.75□□□□□ -0.85
PDZRN4-204ENST00000548316 SCAPERQ9BY12 1400 aa9.75□□□□□ -0.85
PDZRN4-204ENST00000548316 IRX6P78412 446 aaPredicted RBP9.75□□□□□ -0.85
PDZRN4-204ENST00000548316 RALBP1Q15311 655 aa9.75□□□□□ -0.85
PDZRN4-204ENST00000548316 ZC3H13Q5T200 1668 aaKnown RBP9.74□□□□□ -0.85
PDZRN4-204ENST00000548316 DCAF11Q8TEB1 546 aa9.74□□□□□ -0.85
PDZRN4-204ENST00000548316 MROH2AA6NES4 1674 aa9.73□□□□□ -0.85
PDZRN4-204ENST00000548316 ATP7AQ04656 1500 aa9.73□□□□□ -0.85
PDZRN4-204ENST00000548316 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
PDZRN4-204ENST00000548316 WASHC2CQ9Y4E1 1318 aa9.72□□□□□ -0.85
PDZRN4-204ENST00000548316 NBPF1Q3BBV0 1214 aa9.72□□□□□ -0.85
PDZRN4-204ENST00000548316 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
PDZRN4-204ENST00000548316 LMTK2Q8IWU2 1503 aa9.72□□□□□ -0.85
PDZRN4-204ENST00000548316 MAP3K4Q9Y6R4 1608 aa9.71□□□□□ -0.85
PDZRN4-204ENST00000548316 NRXN1Q9ULB1 1477 aa9.71□□□□□ -0.86
PDZRN4-204ENST00000548316 ZNF326Q5BKZ1 582 aaKnown RBP9.71□□□□□ -0.86
PDZRN4-204ENST00000548316 KIF1BO60333 1816 aa9.71□□□□□ -0.86
PDZRN4-204ENST00000548316 PPRC1Q5VV67 1664 aaKnown RBP9.71□□□□□ -0.86
PDZRN4-204ENST00000548316 MYOM2P54296 1465 aa9.7□□□□□ -0.86
PDZRN4-204ENST00000548316 EFCAB6Q5THR3 1501 aa9.7□□□□□ -0.86
PDZRN4-204ENST00000548316 KDM2AQ9Y2K7 1162 aa9.69□□□□□ -0.86
PDZRN4-204ENST00000548316 KDM5AP29375 1690 aaKnown RBP9.69□□□□□ -0.86
PDZRN4-204ENST00000548316 PPLO60437 1756 aa9.68□□□□□ -0.86
PDZRN4-204ENST00000548316 EFCAB2Q5VUJ9 269 aa9.67□□□□□ -0.86
PDZRN4-204ENST00000548316 SCAF11Q99590 1463 aaKnown RBP9.67□□□□□ -0.86
PDZRN4-204ENST00000548316 NLRP13Q86W25 1043 aa9.67□□□□□ -0.86
PDZRN4-204ENST00000548316 FRMPD1Q5SYB0 1578 aa9.67□□□□□ -0.86
PDZRN4-204ENST00000548316 B4GALNT3Q6L9W6 998 aa9.66□□□□□ -0.86
PDZRN4-204ENST00000548316 ADGRB3O60242 1522 aa9.66□□□□□ -0.86
PDZRN4-204ENST00000548316 SETBP1Q9Y6X0 1596 aa9.66□□□□□ -0.86
PDZRN4-204ENST00000548316 NPC1L1Q9UHC9 1359 aa9.66□□□□□ -0.86
PDZRN4-204ENST00000548316 TMC1Q8TDI8 760 aa9.65□□□□□ -0.87
PDZRN4-204ENST00000548316 FANCAO15360 1455 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms