RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 POLR1AO95602 1720 aaPredicted RBP11.02□□□□□ -0.65
RNF41-204ENST00000548120 GGT6Q6P531 493 aa11.02□□□□□ -0.65
RNF41-204ENST00000548120 LRRC7Q96NW7 1537 aa11.01□□□□□ -0.65
RNF41-204ENST00000548120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.01□□□□□ -0.65
RNF41-204ENST00000548120 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
RNF41-204ENST00000548120 APLP2Q06481 763 aa11□□□□□ -0.65
RNF41-204ENST00000548120 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
RNF41-204ENST00000548120 SAMD9LQ8IVG5 1584 aa10.99□□□□□ -0.65
RNF41-204ENST00000548120 ANKLE2Q86XL3 938 aa10.99□□□□□ -0.65
RNF41-204ENST00000548120 SPAG9O60271 1321 aaKnown RBP10.99□□□□□ -0.65
RNF41-204ENST00000548120 PREX2Q70Z35 1606 aa10.98□□□□□ -0.65
RNF41-204ENST00000548120 TNRQ92752 1358 aa10.98□□□□□ -0.65
RNF41-204ENST00000548120 SYNMO15061 1565 aa10.98□□□□□ -0.65
RNF41-204ENST00000548120 PLXNC1O60486 1568 aa10.98□□□□□ -0.65
RNF41-204ENST00000548120 CDC42BPBQ9Y5S2 1711 aa10.98□□□□□ -0.65
RNF41-204ENST00000548120 UPF1Q92900 1129 aaKnown RBP eCLIP10.97□□□□□ -0.65
RNF41-204ENST00000548120 ZNF777Q9ULD5 760 aaPredicted RBP10.97□□□□□ -0.65
RNF41-204ENST00000548120 A2MP01023 1474 aa10.97□□□□□ -0.65
RNF41-204ENST00000548120 ATP7AQ04656 1500 aa10.96□□□□□ -0.65
RNF41-204ENST00000548120 SYCP2Q9BX26 1530 aa10.96□□□□□ -0.65
RNF41-204ENST00000548120 FMN1Q68DA7 1419 aa10.96□□□□□ -0.65
RNF41-204ENST00000548120 KCNA4P22459 653 aa10.95□□□□□ -0.66
RNF41-204ENST00000548120 FBXO31Q5XUX0 539 aaPredicted RBP10.95□□□□□ -0.66
RNF41-204ENST00000548120 MED14O60244 1454 aa10.94□□□□□ -0.66
RNF41-204ENST00000548120 SRCAPQ6ZRS2 3230 aa10.94□□□□□ -0.66
RNF41-204ENST00000548120 IQGAP1P46940 1657 aa10.93□□□□□ -0.66
RNF41-204ENST00000548120 SLC4A2P04920 1241 aa10.93□□□□□ -0.66
RNF41-204ENST00000548120 THEMISQ8N1K5 641 aaPredicted RBP10.93□□□□□ -0.66
RNF41-204ENST00000548120 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
RNF41-204ENST00000548120 UGGT1Q9NYU2 1555 aa10.93□□□□□ -0.66
RNF41-204ENST00000548120 FAM135AQ9P2D6 1515 aa10.93□□□□□ -0.66
RNF41-204ENST00000548120 STRCP1A6NGW2 1772 aa10.93□□□□□ -0.66
RNF41-204ENST00000548120 INO80Q9ULG1 1556 aaPredicted RBP10.92□□□□□ -0.66
RNF41-204ENST00000548120 HNRNPMP52272 730 aaKnown RBP eCLIP10.92□□□□□ -0.66
RNF41-204ENST00000548120 TRIM52Q96A61 297 aa10.92□□□□□ -0.66
RNF41-204ENST00000548120 DEPDC5O75140 1603 aa10.91□□□□□ -0.66
RNF41-204ENST00000548120 PZPP20742 1482 aa10.91□□□□□ -0.66
RNF41-204ENST00000548120 ABCB7O75027 752 aa10.9□□□□□ -0.66
RNF41-204ENST00000548120 FAM135BQ49AJ0 1406 aa10.9□□□□□ -0.66
RNF41-204ENST00000548120 NLRP1Q9C000 1473 aa10.89□□□□□ -0.67
RNF41-204ENST00000548120 MIA2Q96PC5 1412 aa10.88□□□□□ -0.67
RNF41-204ENST00000548120 KDM5DQ9BY66 1539 aa10.88□□□□□ -0.67
RNF41-204ENST00000548120 EHMT2Q96KQ7 1210 aa10.87□□□□□ -0.67
RNF41-204ENST00000548120 ARHGAP35Q9NRY4 1499 aa10.87□□□□□ -0.67
RNF41-204ENST00000548120 CDC42BPAQ5VT25 1732 aa10.86□□□□□ -0.67
RNF41-204ENST00000548120 LRRIQ1Q96JM4 1722 aa10.85□□□□□ -0.67
RNF41-204ENST00000548120 ROBO1Q9Y6N7 1651 aa10.85□□□□□ -0.67
RNF41-204ENST00000548120 MEX3CQ5U5Q3 659 aaKnown RBP10.84□□□□□ -0.67
RNF41-204ENST00000548120 JCADQ9P266 1359 aa10.84□□□□□ -0.67
RNF41-204ENST00000548120 EEA1Q15075 1411 aa10.84□□□□□ -0.67
RNF41-204ENST00000548120 KIAA1107Q9UPP5 1409 aa10.84□□□□□ -0.67
RNF41-204ENST00000548120 WASHC2CQ9Y4E1 1318 aa10.84□□□□□ -0.67
RNF41-204ENST00000548120 ADGBQ8N7X0 1667 aa10.83□□□□□ -0.68
RNF41-204ENST00000548120 PLEKHH2Q8IVE3 1493 aa10.83□□□□□ -0.68
RNF41-204ENST00000548120 TMEM94Q12767 1356 aa10.83□□□□□ -0.68
RNF41-204ENST00000548120 KIF3BO15066 747 aa10.83□□□□□ -0.68
RNF41-204ENST00000548120 ZNF772Q68DY9 489 aaPredicted RBP10.83□□□□□ -0.68
RNF41-204ENST00000548120 LRP6O75581 1613 aa10.83□□□□□ -0.68
RNF41-204ENST00000548120 GPATCH8Q9UKJ3 1502 aaKnown RBP10.83□□□□□ -0.68
RNF41-204ENST00000548120 ZC3H13Q5T200 1668 aaKnown RBP10.82□□□□□ -0.68
RNF41-204ENST00000548120 CCDC18Q5T9S5 1454 aa10.82□□□□□ -0.68
RNF41-204ENST00000548120 SCAF11Q99590 1463 aaKnown RBP10.82□□□□□ -0.68
RNF41-204ENST00000548120 CFDP1Q9UEE9 299 aaPredicted RBP10.82□□□□□ -0.68
RNF41-204ENST00000548120 RBM33Q96EV2 1170 aaKnown RBP10.81□□□□□ -0.68
RNF41-204ENST00000548120 LRRC9Q6ZRR7 1453 aa10.81□□□□□ -0.68
RNF41-204ENST00000548120 DHX29Q7Z478 1369 aaKnown RBP10.8□□□□□ -0.68
RNF41-204ENST00000548120 UBTFP17480 764 aaKnown RBP10.8□□□□□ -0.68
RNF41-204ENST00000548120 RXRBP28702 533 aa10.8□□□□□ -0.68
RNF41-204ENST00000548120 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
RNF41-204ENST00000548120 XIRP1Q702N8 1843 aaKnown RBP10.79□□□□□ -0.68
RNF41-204ENST00000548120 MAP3K1Q13233 1512 aa10.79□□□□□ -0.68
RNF41-204ENST00000548120 LOC105371045A0A1W2PR82 267 aa10.79□□□□□ -0.68
RNF41-204ENST00000548120 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.68
RNF41-204ENST00000548120 LTKP29376 864 aa10.77□□□□□ -0.69
RNF41-204ENST00000548120 PHLPP1O60346 1717 aa10.77□□□□□ -0.69
RNF41-204ENST00000548120 CASKIN1Q8WXD9 1431 aa10.76□□□□□ -0.69
RNF41-204ENST00000548120 CDK12Q9NYV4 1490 aaPredicted RBP10.76□□□□□ -0.69
RNF41-204ENST00000548120 TXNDC2Q86VQ3 553 aa10.76□□□□□ -0.69
RNF41-204ENST00000548120 SPATA31A6Q5VVP1 1343 aa10.76□□□□□ -0.69
RNF41-204ENST00000548120 ZNF644Q9H582 1327 aaPredicted RBP10.76□□□□□ -0.69
RNF41-204ENST00000548120 ERVK-7P63135 1459 aa10.75□□□□□ -0.69
RNF41-204ENST00000548120 PROSER2Q86WR7 435 aaPredicted RBP10.75□□□□□ -0.69
RNF41-204ENST00000548120 RTEL1-TNFRSF6BF6WH68 1400 aa10.75□□□□□ -0.69
RNF41-204ENST00000548120 RGS12O14924 1447 aa10.75□□□□□ -0.69
RNF41-204ENST00000548120 NCOA2Q15596 1464 aa10.74□□□□□ -0.69
RNF41-204ENST00000548120 COL16A1Q07092 1604 aaPredicted RBP10.74□□□□□ -0.69
RNF41-204ENST00000548120 ZRANB1Q9UGI0 708 aa10.74□□□□□ -0.69
RNF41-204ENST00000548120 MSH6P52701 1360 aa10.74□□□□□ -0.69
RNF41-204ENST00000548120 ARHGAP23Q9P227 1491 aa10.74□□□□□ -0.69
RNF41-204ENST00000548120 MBD5Q9P267 1494 aa10.74□□□□□ -0.69
RNF41-204ENST00000548120 SETBP1Q9Y6X0 1596 aa10.73□□□□□ -0.69
RNF41-204ENST00000548120 NUTM2BA6NNL0 878 aaPredicted RBP10.73□□□□□ -0.69
RNF41-204ENST00000548120 NUTM2EB1AL46 878 aaPredicted RBP10.73□□□□□ -0.69
RNF41-204ENST00000548120 NUTM2DQ5VT03 806 aaPredicted RBP10.73□□□□□ -0.69
RNF41-204ENST00000548120 NUTM2AQ8IVF1 878 aaPredicted RBP10.73□□□□□ -0.69
RNF41-204ENST00000548120 SLAIN2Q9P270 581 aa10.73□□□□□ -0.69
RNF41-204ENST00000548120 EID1Q9Y6B2 187 aa10.73□□□□□ -0.69
RNF41-204ENST00000548120 FGD6Q6ZV73 1430 aa10.73□□□□□ -0.69
RNF41-204ENST00000548120 SLIT1O75093 1534 aa10.73□□□□□ -0.69
RNF41-204ENST00000548120 UBR1Q8IWV7 1749 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms