RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 TSPOAP1O95153 1857 aa19.67■□□□□ 0.74
SMPDL3B-205ENST00000548116 ZNF316A6NFI3 1004 aaPredicted RBP19.67■□□□□ 0.74
SMPDL3B-205ENST00000548116 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
SMPDL3B-205ENST00000548116 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
SMPDL3B-205ENST00000548116 DEPDC5O75140 1603 aa19.66■□□□□ 0.74
SMPDL3B-205ENST00000548116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.74
SMPDL3B-205ENST00000548116 EIF2AK4Q9P2K8 1649 aaKnown RBP19.65■□□□□ 0.74
SMPDL3B-205ENST00000548116 FRMPD1Q5SYB0 1578 aa19.63■□□□□ 0.73
SMPDL3B-205ENST00000548116 ABCA6Q8N139 1617 aa19.63■□□□□ 0.73
SMPDL3B-205ENST00000548116 A2MP01023 1474 aa19.63■□□□□ 0.73
SMPDL3B-205ENST00000548116 TEX14Q8IWB6 1497 aa19.63■□□□□ 0.73
SMPDL3B-205ENST00000548116 MROH1Q8NDA8 1641 aa19.61■□□□□ 0.73
SMPDL3B-205ENST00000548116 VWDEQ8N2E2 1590 aa19.6■□□□□ 0.73
SMPDL3B-205ENST00000548116 KIF3BO15066 747 aa19.59■□□□□ 0.73
SMPDL3B-205ENST00000548116 L3MBTL2Q969R5 705 aa19.59■□□□□ 0.73
SMPDL3B-205ENST00000548116 DIP2CQ9Y2E4 1556 aa19.58■□□□□ 0.73
SMPDL3B-205ENST00000548116 PRDM15P57071 1507 aaPredicted RBP19.58■□□□□ 0.73
SMPDL3B-205ENST00000548116 PLA2R1Q13018 1463 aa19.57■□□□□ 0.72
SMPDL3B-205ENST00000548116 ZMYM4Q5VZL5 1548 aa19.57■□□□□ 0.72
SMPDL3B-205ENST00000548116 RNF17Q9BXT8 1623 aaKnown RBP19.56■□□□□ 0.72
SMPDL3B-205ENST00000548116 BCORL1Q5H9F3 1711 aa19.55■□□□□ 0.72
SMPDL3B-205ENST00000548116 YEATS2Q9ULM3 1422 aa19.54■□□□□ 0.72
SMPDL3B-205ENST00000548116 E9PCH4 1651 aa19.54■□□□□ 0.72
SMPDL3B-205ENST00000548116 ATP10AO60312 1499 aa19.53■□□□□ 0.72
SMPDL3B-205ENST00000548116 TET3O43151 1660 aa19.53■□□□□ 0.72
SMPDL3B-205ENST00000548116 KANK1Q14678 1352 aa19.52■□□□□ 0.72
SMPDL3B-205ENST00000548116 COL17A1Q9UMD9 1497 aaPredicted RBP19.51■□□□□ 0.71
SMPDL3B-205ENST00000548116 LMTK2Q8IWU2 1503 aa19.48■□□□□ 0.71
SMPDL3B-205ENST00000548116 CCDC144AA2RUR9 1427 aa19.48■□□□□ 0.71
SMPDL3B-205ENST00000548116 PTPRTO14522 1441 aa19.47■□□□□ 0.71
SMPDL3B-205ENST00000548116 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
SMPDL3B-205ENST00000548116 CEP152O94986 1710 aa19.45■□□□□ 0.7
SMPDL3B-205ENST00000548116 EFCAB6Q5THR3 1501 aa19.45■□□□□ 0.7
SMPDL3B-205ENST00000548116 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
SMPDL3B-205ENST00000548116 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
SMPDL3B-205ENST00000548116 SPHKAPQ2M3C7 1700 aa19.44■□□□□ 0.7
SMPDL3B-205ENST00000548116 TRPM2O94759 1503 aa19.44■□□□□ 0.7
SMPDL3B-205ENST00000548116 GGT6Q6P531 493 aa19.43■□□□□ 0.7
SMPDL3B-205ENST00000548116 REREQ9P2R6 1566 aa19.42■□□□□ 0.7
SMPDL3B-205ENST00000548116 ABCC3O15438 1527 aa19.41■□□□□ 0.7
SMPDL3B-205ENST00000548116 UHRF1BP1Q6BDS2 1440 aa19.4■□□□□ 0.7
SMPDL3B-205ENST00000548116 CLTCL1P53675 1640 aa19.38■□□□□ 0.69
SMPDL3B-205ENST00000548116 ARHGEF40Q8TER5 1519 aa19.37■□□□□ 0.69
SMPDL3B-205ENST00000548116 SPATA31E1Q6ZUB1 1445 aa19.37■□□□□ 0.69
SMPDL3B-205ENST00000548116 AGLP35573 1532 aa19.36■□□□□ 0.69
SMPDL3B-205ENST00000548116 WASHC2CQ9Y4E1 1318 aa19.36■□□□□ 0.69
SMPDL3B-205ENST00000548116 SIGLEC1Q9BZZ2 1709 aa19.36■□□□□ 0.69
SMPDL3B-205ENST00000548116 NPATQ14207 1427 aa19.36■□□□□ 0.69
SMPDL3B-205ENST00000548116 HIRIP3Q9BW71 556 aaPredicted RBP19.35■□□□□ 0.69
SMPDL3B-205ENST00000548116 CAMSAP1Q5T5Y3 1602 aa19.35■□□□□ 0.69
SMPDL3B-205ENST00000548116 DCAF11Q8TEB1 546 aa19.35■□□□□ 0.69
SMPDL3B-205ENST00000548116 ZC3H13Q5T200 1668 aaKnown RBP19.34■□□□□ 0.69
SMPDL3B-205ENST00000548116 RGL3Q3MIN7 710 aa19.33■□□□□ 0.69
SMPDL3B-205ENST00000548116 KDM2AQ9Y2K7 1162 aa19.32■□□□□ 0.68
SMPDL3B-205ENST00000548116 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
SMPDL3B-205ENST00000548116 ZNF326Q5BKZ1 582 aaKnown RBP19.31■□□□□ 0.68
SMPDL3B-205ENST00000548116 HSPA5P11021 654 aaKnown RBP19.31■□□□□ 0.68
SMPDL3B-205ENST00000548116 RALGAPBQ86X10 1494 aa19.31■□□□□ 0.68
SMPDL3B-205ENST00000548116 ARHGAP31Q2M1Z3 1444 aa19.3■□□□□ 0.68
SMPDL3B-205ENST00000548116 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
SMPDL3B-205ENST00000548116 NEURL4Q96JN8 1562 aa19.3■□□□□ 0.68
SMPDL3B-205ENST00000548116 PRAG1Q86YV5 1406 aa19.3■□□□□ 0.68
SMPDL3B-205ENST00000548116 CFAP65Q6ZU64 1925 aaKnown RBP19.29■□□□□ 0.68
SMPDL3B-205ENST00000548116 EIF4G2P78344 907 aaKnown RBP eCLIP19.29■□□□□ 0.68
SMPDL3B-205ENST00000548116 NOS1P29475 1434 aa19.27■□□□□ 0.68
SMPDL3B-205ENST00000548116 CNTLNQ9NXG0 1405 aa19.27■□□□□ 0.68
SMPDL3B-205ENST00000548116 KIF1BO60333 1816 aa19.25■□□□□ 0.67
SMPDL3B-205ENST00000548116 TRPM1Q7Z4N2 1603 aa19.25■□□□□ 0.67
SMPDL3B-205ENST00000548116 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
SMPDL3B-205ENST00000548116 SYNMO15061 1565 aa19.24■□□□□ 0.67
SMPDL3B-205ENST00000548116 MROH2AA6NES4 1674 aa19.23■□□□□ 0.67
SMPDL3B-205ENST00000548116 PIK3C2BO00750 1634 aa19.22■□□□□ 0.67
SMPDL3B-205ENST00000548116 ADGRB3O60242 1522 aa19.22■□□□□ 0.67
SMPDL3B-205ENST00000548116 MADDQ8WXG6 1647 aa19.2■□□□□ 0.66
SMPDL3B-205ENST00000548116 USP47Q96K76 1375 aa19.2■□□□□ 0.66
SMPDL3B-205ENST00000548116 CLTCQ00610 1675 aaKnown RBP19.2■□□□□ 0.66
SMPDL3B-205ENST00000548116 PREX1Q8TCU6 1659 aa19.2■□□□□ 0.66
SMPDL3B-205ENST00000548116 GPRASP1Q5JY77 1395 aa19.19■□□□□ 0.66
SMPDL3B-205ENST00000548116 MIER1Q8N108 512 aa19.18■□□□□ 0.66
SMPDL3B-205ENST00000548116 STAC3Q96MF2 364 aa19.18■□□□□ 0.66
SMPDL3B-205ENST00000548116 CARD11Q9BXL7 1154 aa19.18■□□□□ 0.66
SMPDL3B-205ENST00000548116 IFT172Q9UG01 1749 aa19.18■□□□□ 0.66
SMPDL3B-205ENST00000548116 DDX10Q13206 875 aaKnown RBP19.17■□□□□ 0.66
SMPDL3B-205ENST00000548116 MLECQ14165 292 aa19.17■□□□□ 0.66
SMPDL3B-205ENST00000548116 ROCK2O75116 1388 aaKnown RBP19.17■□□□□ 0.66
SMPDL3B-205ENST00000548116 NBPF1Q3BBV0 1214 aa19.17■□□□□ 0.66
SMPDL3B-205ENST00000548116 WASHC2AQ641Q2 1341 aa19.16■□□□□ 0.66
SMPDL3B-205ENST00000548116 LAMC1P11047 1609 aa19.16■□□□□ 0.66
SMPDL3B-205ENST00000548116 C11orf95C9JLR9 678 aaPredicted RBP19.15■□□□□ 0.66
SMPDL3B-205ENST00000548116 MYOM2P54296 1465 aa19.15■□□□□ 0.66
SMPDL3B-205ENST00000548116 ERVK-7P63135 1459 aa19.15■□□□□ 0.66
SMPDL3B-205ENST00000548116 FBXO31Q5XUX0 539 aaPredicted RBP19.14■□□□□ 0.65
SMPDL3B-205ENST00000548116 IDI1Q13907 227 aa19.13■□□□□ 0.65
SMPDL3B-205ENST00000548116 SLC52A1Q9NWF4 448 aa19.12■□□□□ 0.65
SMPDL3B-205ENST00000548116 NRXN1Q9ULB1 1477 aa19.12■□□□□ 0.65
SMPDL3B-205ENST00000548116 PPLO60437 1756 aa19.12■□□□□ 0.65
SMPDL3B-205ENST00000548116 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
SMPDL3B-205ENST00000548116 POLR1AO95602 1720 aaPredicted RBP19.11■□□□□ 0.65
SMPDL3B-205ENST00000548116 CCDC7Q96M83 1385 aa19.11■□□□□ 0.65
SMPDL3B-205ENST00000548116 SPATA31D1Q6ZQQ2 1576 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms