RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 CEP170BQ9Y4F5 1589 aaPredicted RBP33.68■■■□□ 2.98
USP44-204ENST00000547951 PTPRTO14522 1441 aa33.68■■■□□ 2.98
USP44-204ENST00000547951 APLP2Q06481 763 aa33.67■■■□□ 2.98
USP44-204ENST00000547951 FBXO31Q5XUX0 539 aaPredicted RBP33.66■■■□□ 2.98
USP44-204ENST00000547951 PTPN23Q9H3S7 1636 aa33.65■■■□□ 2.98
USP44-204ENST00000547951 NCKAP5LQ9HCH0 1330 aa33.62■■■□□ 2.97
USP44-204ENST00000547951 WASHC2CQ9Y4E1 1318 aa33.62■■■□□ 2.97
USP44-204ENST00000547951 RNF17Q9BXT8 1623 aaKnown RBP33.62■■■□□ 2.97
USP44-204ENST00000547951 FAM135AQ9P2D6 1515 aa33.61■■■□□ 2.97
USP44-204ENST00000547951 CROCC2H7BZ55 1655 aa33.61■■■□□ 2.97
USP44-204ENST00000547951 PZPP20742 1482 aa33.6■■■□□ 2.97
USP44-204ENST00000547951 ABCC5O15440 1437 aa33.59■■■□□ 2.97
USP44-204ENST00000547951 MROH1Q8NDA8 1641 aa33.57■■■□□ 2.97
USP44-204ENST00000547951 FGD6Q6ZV73 1430 aa33.57■■■□□ 2.96
USP44-204ENST00000547951 EIF2AK4Q9P2K8 1649 aaKnown RBP33.57■■■□□ 2.96
USP44-204ENST00000547951 DNMT1P26358 1616 aaKnown RBP33.56■■■□□ 2.96
USP44-204ENST00000547951 TNRQ92752 1358 aa33.56■■■□□ 2.96
USP44-204ENST00000547951 A2ML1A8K2U0 1454 aa33.56■■■□□ 2.96
USP44-204ENST00000547951 ABCC3O15438 1527 aa33.54■■■□□ 2.96
USP44-204ENST00000547951 PLA2R1Q13018 1463 aa33.54■■■□□ 2.96
USP44-204ENST00000547951 LTBP4Q8N2S1 1624 aa33.53■■■□□ 2.96
USP44-204ENST00000547951 TCOF1Q13428 1488 aaKnown RBP33.52■■■□□ 2.96
USP44-204ENST00000547951 DUOX2Q9NRD8 1548 aa33.52■■■□□ 2.96
USP44-204ENST00000547951 SHANK2Q9UPX8 1470 aa33.51■■■□□ 2.96
USP44-204ENST00000547951 DAPK1P53355 1430 aa33.51■■■□□ 2.95
USP44-204ENST00000547951 KIF15Q9NS87 1388 aa33.49■■■□□ 2.95
USP44-204ENST00000547951 CEP152O94986 1710 aa33.49■■■□□ 2.95
USP44-204ENST00000547951 ZC3H13Q5T200 1668 aaKnown RBP33.48■■■□□ 2.95
USP44-204ENST00000547951 RRP7BPQ9NSQ0 103 aa33.47■■■□□ 2.95
USP44-204ENST00000547951 PKD2Q13563 968 aa33.44■■■□□ 2.94
USP44-204ENST00000547951 CHIC2Q9UKJ5 165 aa33.41■■■□□ 2.94
USP44-204ENST00000547951 ZNF335Q9H4Z2 1342 aaPredicted RBP33.41■■■□□ 2.94
USP44-204ENST00000547951 CFAP65Q6ZU64 1925 aaKnown RBP33.4■■■□□ 2.94
USP44-204ENST00000547951 POLR1AO95602 1720 aaPredicted RBP33.39■■■□□ 2.94
USP44-204ENST00000547951 SPATA31D1Q6ZQQ2 1576 aa33.38■■■□□ 2.93
USP44-204ENST00000547951 NEURL4Q96JN8 1562 aa33.38■■■□□ 2.93
USP44-204ENST00000547951 ERBINQ96RT1 1412 aa33.38■■■□□ 2.93
USP44-204ENST00000547951 PRDM15P57071 1507 aaPredicted RBP33.38■■■□□ 2.93
USP44-204ENST00000547951 ERVK-7P63135 1459 aa33.37■■■□□ 2.93
USP44-204ENST00000547951 NLRP1Q9C000 1473 aa33.37■■■□□ 2.93
USP44-204ENST00000547951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.35■■■□□ 2.93
USP44-204ENST00000547951 DEPDC5O75140 1603 aa33.34■■■□□ 2.93
USP44-204ENST00000547951 UGGT1Q9NYU2 1555 aa33.34■■■□□ 2.93
USP44-204ENST00000547951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.31■■■□□ 2.92
USP44-204ENST00000547951 FAM50AQ14320 339 aaKnown RBP33.3■■■□□ 2.92
USP44-204ENST00000547951 ANKRD30AQ9BXX3 1397 aa33.3■■■□□ 2.92
USP44-204ENST00000547951 THEMISQ8N1K5 641 aaPredicted RBP33.26■■■□□ 2.91
USP44-204ENST00000547951 ADGRL2O95490 1459 aa33.25■■■□□ 2.91
USP44-204ENST00000547951 IQSEC2Q5JU85 1478 aa33.25■■■□□ 2.91
USP44-204ENST00000547951 ARHGAP31Q2M1Z3 1444 aa33.22■■■□□ 2.91
USP44-204ENST00000547951 ANKLE2Q86XL3 938 aa33.22■■■□□ 2.91
USP44-204ENST00000547951 UBR1Q8IWV7 1749 aa33.21■■■□□ 2.91
USP44-204ENST00000547951 VWDEQ8N2E2 1590 aa33.2■■■□□ 2.91
USP44-204ENST00000547951 PPARGC1BQ86YN6 1023 aaKnown RBP33.17■■■□□ 2.9
USP44-204ENST00000547951 NPHP4O75161 1426 aaPredicted RBP33.17■■■□□ 2.9
USP44-204ENST00000547951 MED14O60244 1454 aa33.17■■■□□ 2.9
USP44-204ENST00000547951 KANK1Q14678 1352 aa33.16■■■□□ 2.9
USP44-204ENST00000547951 LMTK2Q8IWU2 1503 aa33.15■■■□□ 2.9
USP44-204ENST00000547951 IQGAP1P46940 1657 aa33.13■■■□□ 2.89
USP44-204ENST00000547951 PIK3C2BO00750 1634 aa33.11■■■□□ 2.89
USP44-204ENST00000547951 ANKRD50Q9ULJ7 1429 aa33.1■■■□□ 2.89
USP44-204ENST00000547951 EFCAB6Q5THR3 1501 aa33.08■■■□□ 2.89
USP44-204ENST00000547951 UBAP1LF5GYI3 381 aa33.07■■■□□ 2.88
USP44-204ENST00000547951 SYNMO15061 1565 aa33.07■■■□□ 2.88
USP44-204ENST00000547951 ARHGAP23Q9P227 1491 aa33.05■■■□□ 2.88
USP44-204ENST00000547951 STRCP1A6NGW2 1772 aa33.04■■■□□ 2.88
USP44-204ENST00000547951 CPS1P31327 1500 aa33.04■■■□□ 2.88
USP44-204ENST00000547951 SLIT1O75093 1534 aa33.03■■■□□ 2.88
USP44-204ENST00000547951 LTKP29376 864 aa33.03■■■□□ 2.88
USP44-204ENST00000547951 SCAF11Q99590 1463 aaKnown RBP33.02■■■□□ 2.88
USP44-204ENST00000547951 NOS1P29475 1434 aa33■■■□□ 2.87
USP44-204ENST00000547951 IDI1Q13907 227 aa32.99■■■□□ 2.87
USP44-204ENST00000547951 TXNDC2Q86VQ3 553 aa32.97■■■□□ 2.87
USP44-204ENST00000547951 UNC13BO14795 1591 aa32.96■■■□□ 2.87
USP44-204ENST00000547951 ITGAEP38570 1179 aa32.96■■■□□ 2.87
USP44-204ENST00000547951 TET3O43151 1660 aa32.94■■■□□ 2.86
USP44-204ENST00000547951 ROCK1Q13464 1354 aa32.94■■■□□ 2.86
USP44-204ENST00000547951 TMEM2Q9UHN6 1383 aa32.94■■■□□ 2.86
USP44-204ENST00000547951 KDM5AP29375 1690 aaKnown RBP32.93■■■□□ 2.86
USP44-204ENST00000547951 STAG3Q9UJ98 1225 aa32.91■■■□□ 2.86
USP44-204ENST00000547951 GCC2Q8IWJ2 1684 aa32.89■■■□□ 2.86
USP44-204ENST00000547951 ADGRB3O60242 1522 aa32.89■■■□□ 2.86
USP44-204ENST00000547951 ALKQ9UM73 1620 aa32.88■■■□□ 2.85
USP44-204ENST00000547951 RPRD2Q5VT52 1461 aaKnown RBP32.88■■■□□ 2.85
USP44-204ENST00000547951 LRRC7Q96NW7 1537 aa32.87■■■□□ 2.85
USP44-204ENST00000547951 EID1Q9Y6B2 187 aa32.87■■■□□ 2.85
USP44-204ENST00000547951 PIP4K2BP78356 416 aa32.85■■■□□ 2.85
USP44-204ENST00000547951 MYO5BQ9ULV0 1848 aa32.85■■■□□ 2.85
USP44-204ENST00000547951 E9PCH4 1651 aa32.85■■■□□ 2.85
USP44-204ENST00000547951 SCAF1Q9H7N4 1312 aaKnown RBP32.83■■■□□ 2.85
USP44-204ENST00000547951 IQGAP3Q86VI3 1631 aa32.83■■■□□ 2.85
USP44-204ENST00000547951 DISP3Q9P2K9 1392 aa32.83■■■□□ 2.85
USP44-204ENST00000547951 SLC52A1Q9NWF4 448 aa32.81■■■□□ 2.84
USP44-204ENST00000547951 TOM1O60784 492 aa32.79■■■□□ 2.84
USP44-204ENST00000547951 XIRP1Q702N8 1843 aaKnown RBP32.77■■■□□ 2.84
USP44-204ENST00000547951 TMEM131LA2VDJ0 1609 aa32.76■■■□□ 2.83
USP44-204ENST00000547951 NUP155O75694 1391 aa32.75■■■□□ 2.83
USP44-204ENST00000547951 HSPA1LP34931 641 aa32.75■■■□□ 2.83
USP44-204ENST00000547951 SENP3Q9H4L4 574 aaPredicted RBP32.75■■■□□ 2.83
USP44-204ENST00000547951 RRBP1Q9P2E9 1410 aaKnown RBP32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms