RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 EMILIN3Q9NT22 766 aa7.97□□□□□ -1.13
CEP290-204ENST00000547926 HS6ST3Q8IZP7 471 aa7.96□□□□□ -1.14
CEP290-204ENST00000547926 ZNF775Q96BV0 537 aaPredicted RBP7.94□□□□□ -1.14
CEP290-204ENST00000547926 PRKD2Q9BZL6 878 aa7.93□□□□□ -1.14
CEP290-204ENST00000547926 HPS5Q9UPZ3 1129 aa7.91□□□□□ -1.14
CEP290-204ENST00000547926 CHGAP10645 457 aaKnown RBP7.91□□□□□ -1.14
CEP290-204ENST00000547926 LAPTM4AQ15012 233 aa7.91□□□□□ -1.14
CEP290-204ENST00000547926 MAP3K9P80192 1104 aa7.9□□□□□ -1.14
CEP290-204ENST00000547926 LAPTM4BQ86VI4 370 aa7.9□□□□□ -1.14
CEP290-204ENST00000547926 LARP6Q9BRS8 491 aaKnown RBP7.9□□□□□ -1.14
CEP290-204ENST00000547926 ZNF787Q6DD87 383 aa7.9□□□□□ -1.15
CEP290-204ENST00000547926 TJAP1Q5JTD0 557 aa7.88□□□□□ -1.15
CEP290-204ENST00000547926 NRG2O14511 850 aaPredicted RBP7.88□□□□□ -1.15
CEP290-204ENST00000547926 NYAP1Q6ZVC0 841 aa7.88□□□□□ -1.15
CEP290-204ENST00000547926 TSR3Q9UJK0 312 aaKnown RBP7.88□□□□□ -1.15
CEP290-204ENST00000547926 C6orf132Q5T0Z8 1188 aa7.87□□□□□ -1.15
CEP290-204ENST00000547926 PPP1R18Q6NYC8 613 aa7.87□□□□□ -1.15
CEP290-204ENST00000547926 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.87□□□□□ -1.15
CEP290-204ENST00000547926 PDE4AP27815 886 aa7.86□□□□□ -1.15
CEP290-204ENST00000547926 ZNF516Q92618 1163 aa7.86□□□□□ -1.15
CEP290-204ENST00000547926 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
CEP290-204ENST00000547926 FAM98CQ17RN3 349 aaKnown RBP7.85□□□□□ -1.15
CEP290-204ENST00000547926 TYW1BQ6NUM6 668 aa7.85□□□□□ -1.15
CEP290-204ENST00000547926 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
CEP290-204ENST00000547926 POTECB2RU33 542 aa7.85□□□□□ -1.15
CEP290-204ENST00000547926 DDX27Q96GQ7 796 aaKnown RBP7.85□□□□□ -1.15
CEP290-204ENST00000547926 RBM33Q96EV2 1170 aaKnown RBP7.84□□□□□ -1.15
CEP290-204ENST00000547926 LRCH3Q96II8 777 aa7.84□□□□□ -1.15
CEP290-204ENST00000547926 SMAPO00193 183 aa7.84□□□□□ -1.16
CEP290-204ENST00000547926 NKX2-3Q8TAU0 364 aa7.84□□□□□ -1.16
CEP290-204ENST00000547926 TSKSQ9UJT2 592 aa7.84□□□□□ -1.16
CEP290-204ENST00000547926 PHF14O94880 888 aa7.83□□□□□ -1.16
CEP290-204ENST00000547926 MTRQ99707 1265 aa7.82□□□□□ -1.16
CEP290-204ENST00000547926 PDZRN3Q9UPQ7 1066 aa7.82□□□□□ -1.16
CEP290-204ENST00000547926 FBXW7Q969H0 707 aa7.81□□□□□ -1.16
CEP290-204ENST00000547926 MFSD10Q14728 455 aa7.81□□□□□ -1.16
CEP290-204ENST00000547926 TSR1Q2NL82 804 aaKnown RBP7.8□□□□□ -1.16
CEP290-204ENST00000547926 CADPS2Q86UW7 1296 aa7.8□□□□□ -1.16
CEP290-204ENST00000547926 SAMD7Q7Z3H4 446 aa7.79□□□□□ -1.16
CEP290-204ENST00000547926 FAM198AQ9UFP1 575 aa7.79□□□□□ -1.16
CEP290-204ENST00000547926 ONECUT3O60422 494 aaPredicted RBP7.78□□□□□ -1.16
CEP290-204ENST00000547926 PPP4CP60510 307 aa7.78□□□□□ -1.16
CEP290-204ENST00000547926 TRIM67Q6ZTA4 783 aa7.78□□□□□ -1.16
CEP290-204ENST00000547926 DDX12PQ92771 950 aa7.78□□□□□ -1.16
CEP290-204ENST00000547926 GTPBP6O43824 516 aaPredicted RBP7.78□□□□□ -1.16
CEP290-204ENST00000547926 DNAJC5Q9H3Z4 198 aa7.78□□□□□ -1.16
CEP290-204ENST00000547926 V9GY48 417 aaPredicted RBP7.78□□□□□ -1.16
CEP290-204ENST00000547926 DPYSL4O14531 572 aa7.76□□□□□ -1.17
CEP290-204ENST00000547926 EMID1Q96A84 441 aaPredicted RBP7.76□□□□□ -1.17
CEP290-204ENST00000547926 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.76□□□□□ -1.17
CEP290-204ENST00000547926 APLP1P51693 650 aa7.74□□□□□ -1.17
CEP290-204ENST00000547926 PRIM1P49642 420 aaKnown RBP7.73□□□□□ -1.17
CEP290-204ENST00000547926 IL21Q9HBE4 155 aa7.73□□□□□ -1.17
CEP290-204ENST00000547926 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
CEP290-204ENST00000547926 EPAS1Q99814 870 aa7.71□□□□□ -1.18
CEP290-204ENST00000547926 MYT1Q01538 1121 aa7.7□□□□□ -1.18
CEP290-204ENST00000547926 COPS2P61201 443 aa7.7□□□□□ -1.18
CEP290-204ENST00000547926 PACS2Q86VP3 889 aa7.69□□□□□ -1.18
CEP290-204ENST00000547926 CDCA7LQ96GN5 454 aa7.69□□□□□ -1.18
CEP290-204ENST00000547926 RNF40O75150 1001 aa7.68□□□□□ -1.18
CEP290-204ENST00000547926 MAP3K7O43318 606 aa7.67□□□□□ -1.18
CEP290-204ENST00000547926 EN1Q05925 392 aaPredicted RBP7.67□□□□□ -1.18
CEP290-204ENST00000547926 NBR1Q14596 966 aa7.67□□□□□ -1.18
CEP290-204ENST00000547926 CAMK2BQ13554 666 aa7.66□□□□□ -1.18
CEP290-204ENST00000547926 RYDENQ9NUL5 291 aaKnown RBP7.66□□□□□ -1.18
CEP290-204ENST00000547926 ST8SIA5O15466 376 aa7.64□□□□□ -1.19
CEP290-204ENST00000547926 TATDN2Q93075 761 aa7.64□□□□□ -1.19
CEP290-204ENST00000547926 PNMA3Q9UL41 463 aa7.64□□□□□ -1.19
CEP290-204ENST00000547926 PRSS12P56730 875 aa7.63□□□□□ -1.19
CEP290-204ENST00000547926 RNF223E7ERA6 249 aa7.63□□□□□ -1.19
CEP290-204ENST00000547926 PPEF1O14829 653 aaPredicted RBP7.62□□□□□ -1.19
CEP290-204ENST00000547926 PKDCCQ504Y2 493 aa7.61□□□□□ -1.19
CEP290-204ENST00000547926 NUDT18Q6ZVK8 323 aa7.61□□□□□ -1.19
CEP290-204ENST00000547926 CDHR5Q9HBB8 845 aa7.61□□□□□ -1.19
CEP290-204ENST00000547926 TNFRSF10AO00220 468 aa7.61□□□□□ -1.19
CEP290-204ENST00000547926 TREML4Q6UXN2 200 aa7.61□□□□□ -1.19
CEP290-204ENST00000547926 SLC19A1P41440 591 aa7.6□□□□□ -1.19
CEP290-204ENST00000547926 DACH1Q9UI36 760 aa7.6□□□□□ -1.19
CEP290-204ENST00000547926 TLL1O43897 1013 aa7.59□□□□□ -1.19
CEP290-204ENST00000547926 SPRYD7Q5W111 196 aa7.59□□□□□ -1.19
CEP290-204ENST00000547926 ZPR1O75312 459 aa7.58□□□□□ -1.2
CEP290-204ENST00000547926 LIAT1Q6ZQX7 453 aa7.58□□□□□ -1.2
CEP290-204ENST00000547926 SWT1Q5T5J6 900 aaKnown RBP7.58□□□□□ -1.2
CEP290-204ENST00000547926 FAM187AA6NFU0 413 aa7.57□□□□□ -1.2
CEP290-204ENST00000547926 AAASQ9NRG9 546 aa7.57□□□□□ -1.2
CEP290-204ENST00000547926 GDF9O60383 454 aa7.55□□□□□ -1.2
CEP290-204ENST00000547926 DGAT1O75907 488 aa7.55□□□□□ -1.2
CEP290-204ENST00000547926 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
CEP290-204ENST00000547926 TMUB1Q9BVT8 246 aa7.55□□□□□ -1.2
CEP290-204ENST00000547926 PLA2G2CQ5R387 149 aa7.55□□□□□ -1.2
CEP290-204ENST00000547926 BLOC1S3Q6QNY0 202 aa7.55□□□□□ -1.2
CEP290-204ENST00000547926 NBPF26B4DH59 902 aa7.54□□□□□ -1.2
CEP290-204ENST00000547926 PDIA6Q15084 440 aa7.54□□□□□ -1.2
CEP290-204ENST00000547926 GGCXP38435 758 aa7.54□□□□□ -1.2
CEP290-204ENST00000547926 ZNF598Q86UK7 904 aaKnown RBP7.54□□□□□ -1.2
CEP290-204ENST00000547926 GRXCR2A6NFK2 248 aa7.53□□□□□ -1.2
CEP290-204ENST00000547926 PRR20EP86478 221 aa7.52□□□□□ -1.2
CEP290-204ENST00000547926 PRR20CP86479 221 aa7.52□□□□□ -1.2
CEP290-204ENST00000547926 PRR20DP86480 221 aa7.52□□□□□ -1.2
CEP290-204ENST00000547926 PRR20BP86481 221 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms