RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
CCDC65-203ENST00000547861 MYO5CQ9NQX4 1742 aa11.91□□□□□ -0.5
CCDC65-203ENST00000547861 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
CCDC65-203ENST00000547861 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
CCDC65-203ENST00000547861 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
CCDC65-203ENST00000547861 PREX2Q70Z35 1606 aa11.91□□□□□ -0.5
CCDC65-203ENST00000547861 CDC42BPBQ9Y5S2 1711 aa11.9□□□□□ -0.5
CCDC65-203ENST00000547861 CAMSAP2Q08AD1 1489 aa11.9□□□□□ -0.5
CCDC65-203ENST00000547861 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
CCDC65-203ENST00000547861 DAPK1P53355 1430 aa11.88□□□□□ -0.51
CCDC65-203ENST00000547861 GPATCH8Q9UKJ3 1502 aaKnown RBP11.88□□□□□ -0.51
CCDC65-203ENST00000547861 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC65-203ENST00000547861 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
CCDC65-203ENST00000547861 ATP10AO60312 1499 aa11.86□□□□□ -0.51
CCDC65-203ENST00000547861 HSPA2P54652 639 aa11.86□□□□□ -0.51
CCDC65-203ENST00000547861 AFAP1Q8N556 730 aa11.86□□□□□ -0.51
CCDC65-203ENST00000547861 FER1L4A9Z1Z3 1794 aa11.86□□□□□ -0.51
CCDC65-203ENST00000547861 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
CCDC65-203ENST00000547861 ABCC5O15440 1437 aa11.84□□□□□ -0.51
CCDC65-203ENST00000547861 C9orf84Q5VXU9 1444 aa11.84□□□□□ -0.51
CCDC65-203ENST00000547861 FBXO41Q8TF61 875 aa11.84□□□□□ -0.51
CCDC65-203ENST00000547861 ZNF518AQ6AHZ1 1483 aa11.84□□□□□ -0.51
CCDC65-203ENST00000547861 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
CCDC65-203ENST00000547861 ARHGEF12Q9NZN5 1544 aa11.82□□□□□ -0.52
CCDC65-203ENST00000547861 KDM5CP41229 1560 aa11.82□□□□□ -0.52
CCDC65-203ENST00000547861 ARHGEF5Q12774 1597 aa11.82□□□□□ -0.52
CCDC65-203ENST00000547861 ROCK1Q13464 1354 aa11.82□□□□□ -0.52
CCDC65-203ENST00000547861 ADGRL2O95490 1459 aa11.81□□□□□ -0.52
CCDC65-203ENST00000547861 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
CCDC65-203ENST00000547861 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
CCDC65-203ENST00000547861 SHANK2Q9UPX8 1470 aa11.8□□□□□ -0.52
CCDC65-203ENST00000547861 ZNF644Q9H582 1327 aaPredicted RBP11.8□□□□□ -0.52
CCDC65-203ENST00000547861 TRAPPC8Q9Y2L5 1435 aa11.79□□□□□ -0.52
CCDC65-203ENST00000547861 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
CCDC65-203ENST00000547861 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
CCDC65-203ENST00000547861 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
CCDC65-203ENST00000547861 CHIC2Q9UKJ5 165 aa11.79□□□□□ -0.52
CCDC65-203ENST00000547861 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
CCDC65-203ENST00000547861 HAX1O00165 279 aa11.78□□□□□ -0.52
CCDC65-203ENST00000547861 RRP7BPQ9NSQ0 103 aa11.78□□□□□ -0.52
CCDC65-203ENST00000547861 ABCC1P33527 1531 aa11.78□□□□□ -0.52
CCDC65-203ENST00000547861 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
CCDC65-203ENST00000547861 ABCA6Q8N139 1617 aa11.77□□□□□ -0.52
CCDC65-203ENST00000547861 CFDP1Q9UEE9 299 aaPredicted RBP11.77□□□□□ -0.53
CCDC65-203ENST00000547861 ZNF777Q9ULD5 760 aaPredicted RBP11.77□□□□□ -0.53
CCDC65-203ENST00000547861 PREX1Q8TCU6 1659 aa11.76□□□□□ -0.53
CCDC65-203ENST00000547861 REREQ9P2R6 1566 aa11.75□□□□□ -0.53
CCDC65-203ENST00000547861 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
CCDC65-203ENST00000547861 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
CCDC65-203ENST00000547861 SETD1BQ9UPS6 1966 aaKnown RBP11.74□□□□□ -0.53
CCDC65-203ENST00000547861 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
CCDC65-203ENST00000547861 KIDINS220Q9ULH0 1771 aa11.74□□□□□ -0.53
CCDC65-203ENST00000547861 SIN3AQ96ST3 1273 aa11.73□□□□□ -0.53
CCDC65-203ENST00000547861 ESF1Q9H501 851 aaKnown RBP11.73□□□□□ -0.53
CCDC65-203ENST00000547861 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
CCDC65-203ENST00000547861 CCDC141Q6ZP82 1450 aa11.72□□□□□ -0.53
CCDC65-203ENST00000547861 AGLP35573 1532 aa11.72□□□□□ -0.53
CCDC65-203ENST00000547861 HNRNPMP52272 730 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC65-203ENST00000547861 UHRF1BP1Q6BDS2 1440 aa11.72□□□□□ -0.53
CCDC65-203ENST00000547861 PLXNC1O60486 1568 aa11.72□□□□□ -0.53
CCDC65-203ENST00000547861 C3P01024 1663 aa11.71□□□□□ -0.53
CCDC65-203ENST00000547861 MBD5Q9P267 1494 aa11.71□□□□□ -0.53
CCDC65-203ENST00000547861 CERKQ8TCT0 537 aa11.71□□□□□ -0.54
CCDC65-203ENST00000547861 SPAG9O60271 1321 aaKnown RBP11.7□□□□□ -0.54
CCDC65-203ENST00000547861 PZPP20742 1482 aa11.7□□□□□ -0.54
CCDC65-203ENST00000547861 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
CCDC65-203ENST00000547861 ANKRD30AQ9BXX3 1397 aa11.69□□□□□ -0.54
CCDC65-203ENST00000547861 KDM5DQ9BY66 1539 aa11.69□□□□□ -0.54
CCDC65-203ENST00000547861 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
CCDC65-203ENST00000547861 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
CCDC65-203ENST00000547861 UNC13BO14795 1591 aa11.67□□□□□ -0.54
CCDC65-203ENST00000547861 PLEKHH2Q8IVE3 1493 aa11.67□□□□□ -0.54
CCDC65-203ENST00000547861 TONSLQ96HA7 1378 aa11.67□□□□□ -0.54
CCDC65-203ENST00000547861 TRIM52Q96A61 297 aa11.67□□□□□ -0.54
CCDC65-203ENST00000547861 CNTLNQ9NXG0 1405 aa11.67□□□□□ -0.54
CCDC65-203ENST00000547861 KIAA1107Q9UPP5 1409 aa11.67□□□□□ -0.54
CCDC65-203ENST00000547861 ACIN1Q9UKV3 1341 aaKnown RBP11.66□□□□□ -0.54
CCDC65-203ENST00000547861 ATP7AQ04656 1500 aa11.66□□□□□ -0.54
CCDC65-203ENST00000547861 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
CCDC65-203ENST00000547861 ANKRD50Q9ULJ7 1429 aa11.65□□□□□ -0.54
CCDC65-203ENST00000547861 MPHOSPH9Q99550 1183 aa11.64□□□□□ -0.55
CCDC65-203ENST00000547861 INO80Q9ULG1 1556 aaPredicted RBP11.64□□□□□ -0.55
CCDC65-203ENST00000547861 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
CCDC65-203ENST00000547861 A2MP01023 1474 aa11.63□□□□□ -0.55
CCDC65-203ENST00000547861 SPDYE1Q8NFV5 336 aaPredicted RBP11.63□□□□□ -0.55
CCDC65-203ENST00000547861 KIF15Q9NS87 1388 aa11.63□□□□□ -0.55
CCDC65-203ENST00000547861 MROH2AA6NES4 1674 aa11.63□□□□□ -0.55
CCDC65-203ENST00000547861 RPRD2Q5VT52 1461 aaKnown RBP11.63□□□□□ -0.55
CCDC65-203ENST00000547861 EVX2Q03828 476 aa11.63□□□□□ -0.55
CCDC65-203ENST00000547861 GGT6Q6P531 493 aa11.63□□□□□ -0.55
CCDC65-203ENST00000547861 PTPRTO14522 1441 aa11.62□□□□□ -0.55
CCDC65-203ENST00000547861 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
CCDC65-203ENST00000547861 IQGAP3Q86VI3 1631 aa11.62□□□□□ -0.55
CCDC65-203ENST00000547861 POLR1AO95602 1720 aaPredicted RBP11.61□□□□□ -0.55
CCDC65-203ENST00000547861 NPATQ14207 1427 aa11.61□□□□□ -0.55
CCDC65-203ENST00000547861 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
CCDC65-203ENST00000547861 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
CCDC65-203ENST00000547861 ANKRD30BQ9BXX2 1392 aa11.61□□□□□ -0.55
CCDC65-203ENST00000547861 PRKAR2AP13861 404 aaKnown RBP11.6□□□□□ -0.55
CCDC65-203ENST00000547861 CAMSAP1Q5T5Y3 1602 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms