RNA–Protein interactions for RNA: ENST00000547804.1

LINC00941-201, long intergenic non-protein coding RNA 941, humanhuman

TSL 1 (best) BASIC

Gene LINC00941, Length 1,645 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00941-201ENST00000547804 HNRNPMP52272 730 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00941-201ENST00000547804 PPARGC1BQ86YN6 1023 aaKnown RBP15.65■□□□□ 0.1
LINC00941-201ENST00000547804 MLH3Q9UHC1 1453 aa15.64■□□□□ 0.09
LINC00941-201ENST00000547804 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
LINC00941-201ENST00000547804 ARHGEF40Q8TER5 1519 aa15.63■□□□□ 0.09
LINC00941-201ENST00000547804 RSPH4AQ5TD94 716 aa15.63■□□□□ 0.09
LINC00941-201ENST00000547804 ZFYVE16Q7Z3T8 1539 aa15.63■□□□□ 0.09
LINC00941-201ENST00000547804 YEATS2Q9ULM3 1422 aa15.62■□□□□ 0.09
LINC00941-201ENST00000547804 CCDC141Q6ZP82 1450 aa15.62■□□□□ 0.09
LINC00941-201ENST00000547804 ARHGEF5Q12774 1597 aa15.61■□□□□ 0.09
LINC00941-201ENST00000547804 PTPN23Q9H3S7 1636 aa15.61■□□□□ 0.09
LINC00941-201ENST00000547804 RTN4Q9NQC3 1192 aaKnown RBP15.61■□□□□ 0.09
LINC00941-201ENST00000547804 HECW2Q9P2P5 1572 aa15.6■□□□□ 0.09
LINC00941-201ENST00000547804 SPAG9O60271 1321 aaKnown RBP15.6■□□□□ 0.09
LINC00941-201ENST00000547804 ATP10AO60312 1499 aa15.57■□□□□ 0.08
LINC00941-201ENST00000547804 RTEL1-TNFRSF6BF6WH68 1400 aa15.57■□□□□ 0.08
LINC00941-201ENST00000547804 INO80Q9ULG1 1556 aaPredicted RBP15.57■□□□□ 0.08
LINC00941-201ENST00000547804 ATP7AQ04656 1500 aa15.56■□□□□ 0.08
LINC00941-201ENST00000547804 ABCC5O15440 1437 aa15.56■□□□□ 0.08
LINC00941-201ENST00000547804 C9orf84Q5VXU9 1444 aa15.56■□□□□ 0.08
LINC00941-201ENST00000547804 DIP2CQ9Y2E4 1556 aa15.56■□□□□ 0.08
LINC00941-201ENST00000547804 MYT1LQ9UL68 1186 aa15.55■□□□□ 0.08
LINC00941-201ENST00000547804 KIDINS220Q9ULH0 1771 aa15.54■□□□□ 0.08
LINC00941-201ENST00000547804 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
LINC00941-201ENST00000547804 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
LINC00941-201ENST00000547804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.54■□□□□ 0.08
LINC00941-201ENST00000547804 ABCA6Q8N139 1617 aa15.54■□□□□ 0.08
LINC00941-201ENST00000547804 DAPK1P53355 1430 aa15.54■□□□□ 0.08
LINC00941-201ENST00000547804 RRBP1Q9P2E9 1410 aaKnown RBP15.54■□□□□ 0.08
LINC00941-201ENST00000547804 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
LINC00941-201ENST00000547804 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
LINC00941-201ENST00000547804 FAM50AQ14320 339 aaKnown RBP15.53■□□□□ 0.08
LINC00941-201ENST00000547804 MAST1Q9Y2H9 1570 aa15.52■□□□□ 0.08
LINC00941-201ENST00000547804 C19orf67A6NJJ6 358 aa15.52■□□□□ 0.08
LINC00941-201ENST00000547804 DNMT1P26358 1616 aaKnown RBP15.51■□□□□ 0.07
LINC00941-201ENST00000547804 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
LINC00941-201ENST00000547804 ARID4BQ4LE39 1312 aaPredicted RBP15.49■□□□□ 0.07
LINC00941-201ENST00000547804 A2MP01023 1474 aa15.48■□□□□ 0.07
LINC00941-201ENST00000547804 AGLP35573 1532 aa15.48■□□□□ 0.07
LINC00941-201ENST00000547804 SIGLEC1Q9BZZ2 1709 aa15.48■□□□□ 0.07
LINC00941-201ENST00000547804 PLXNC1O60486 1568 aa15.47■□□□□ 0.07
LINC00941-201ENST00000547804 DHX29Q7Z478 1369 aaKnown RBP15.47■□□□□ 0.07
LINC00941-201ENST00000547804 KDM4FA0A1W2PPD8 638 aa15.46■□□□□ 0.07
LINC00941-201ENST00000547804 CROCC2H7BZ55 1655 aa15.46■□□□□ 0.07
LINC00941-201ENST00000547804 PTPRKQ15262 1439 aa15.46■□□□□ 0.07
LINC00941-201ENST00000547804 ADGRL2O95490 1459 aa15.45■□□□□ 0.06
LINC00941-201ENST00000547804 ADGBQ8N7X0 1667 aa15.44■□□□□ 0.06
LINC00941-201ENST00000547804 FARP1Q9Y4F1 1045 aaPredicted RBP15.43■□□□□ 0.06
LINC00941-201ENST00000547804 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
LINC00941-201ENST00000547804 KIF15Q9NS87 1388 aa15.43■□□□□ 0.06
LINC00941-201ENST00000547804 NCOA1Q15788 1441 aa15.43■□□□□ 0.06
LINC00941-201ENST00000547804 CHIC2Q9UKJ5 165 aa15.43■□□□□ 0.06
LINC00941-201ENST00000547804 BCORL1Q5H9F3 1711 aa15.42■□□□□ 0.06
LINC00941-201ENST00000547804 ROCK1Q13464 1354 aa15.41■□□□□ 0.06
LINC00941-201ENST00000547804 DUOX2Q9NRD8 1548 aa15.41■□□□□ 0.06
LINC00941-201ENST00000547804 ADAMTSL3P82987 1691 aa15.4■□□□□ 0.06
LINC00941-201ENST00000547804 CREBZFQ9NS37 354 aa15.4■□□□□ 0.06
LINC00941-201ENST00000547804 RRP7BPQ9NSQ0 103 aa15.4■□□□□ 0.06
LINC00941-201ENST00000547804 MLECQ14165 292 aa15.39■□□□□ 0.05
LINC00941-201ENST00000547804 ERBINQ96RT1 1412 aa15.39■□□□□ 0.05
LINC00941-201ENST00000547804 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
LINC00941-201ENST00000547804 ITGAEP38570 1179 aa15.38■□□□□ 0.05
LINC00941-201ENST00000547804 KIF3BO15066 747 aa15.36■□□□□ 0.05
LINC00941-201ENST00000547804 MADDQ8WXG6 1647 aa15.35■□□□□ 0.05
LINC00941-201ENST00000547804 EIF2AK4Q9P2K8 1649 aaKnown RBP15.35■□□□□ 0.05
LINC00941-201ENST00000547804 GGT6Q6P531 493 aa15.34■□□□□ 0.05
LINC00941-201ENST00000547804 ANKRD50Q9ULJ7 1429 aa15.33■□□□□ 0.04
LINC00941-201ENST00000547804 PTPRMP28827 1452 aa15.33■□□□□ 0.04
LINC00941-201ENST00000547804 CNTLNQ9NXG0 1405 aa15.33■□□□□ 0.04
LINC00941-201ENST00000547804 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
LINC00941-201ENST00000547804 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
LINC00941-201ENST00000547804 FAM135AQ9P2D6 1515 aa15.31■□□□□ 0.04
LINC00941-201ENST00000547804 GABBR2O75899 941 aa15.29■□□□□ 0.04
LINC00941-201ENST00000547804 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
LINC00941-201ENST00000547804 FER1L4A9Z1Z3 1794 aa15.29■□□□□ 0.04
LINC00941-201ENST00000547804 MROH1Q8NDA8 1641 aa15.29■□□□□ 0.04
LINC00941-201ENST00000547804 PROM2Q8N271 834 aa15.28■□□□□ 0.04
LINC00941-201ENST00000547804 RIMS1Q86UR5 1692 aaKnown RBP15.28■□□□□ 0.04
LINC00941-201ENST00000547804 HFM1A2PYH4 1435 aa15.28■□□□□ 0.04
LINC00941-201ENST00000547804 NAIPQ13075 1403 aa15.28■□□□□ 0.04
LINC00941-201ENST00000547804 PRDM15P57071 1507 aaPredicted RBP15.28■□□□□ 0.04
LINC00941-201ENST00000547804 KDM5DQ9BY66 1539 aa15.28■□□□□ 0.04
LINC00941-201ENST00000547804 DEPDC5O75140 1603 aa15.26■□□□□ 0.03
LINC00941-201ENST00000547804 WASHC2CQ9Y4E1 1318 aa15.26■□□□□ 0.03
LINC00941-201ENST00000547804 ZMYM3Q14202 1370 aa15.26■□□□□ 0.03
LINC00941-201ENST00000547804 ABCC3O15438 1527 aa15.25■□□□□ 0.03
LINC00941-201ENST00000547804 VWDEQ8N2E2 1590 aa15.24■□□□□ 0.03
LINC00941-201ENST00000547804 MROH2AA6NES4 1674 aa15.24■□□□□ 0.03
LINC00941-201ENST00000547804 CEBPAP49715 358 aaPredicted RBP15.23■□□□□ 0.03
LINC00941-201ENST00000547804 KANK1Q14678 1352 aa15.23■□□□□ 0.03
LINC00941-201ENST00000547804 CLTCQ00610 1675 aaKnown RBP15.22■□□□□ 0.03
LINC00941-201ENST00000547804 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
LINC00941-201ENST00000547804 LMTK2Q8IWU2 1503 aa15.22■□□□□ 0.03
LINC00941-201ENST00000547804 GCC2Q8IWJ2 1684 aa15.22■□□□□ 0.03
LINC00941-201ENST00000547804 UNC13BO14795 1591 aa15.21■□□□□ 0.03
LINC00941-201ENST00000547804 ZC3H13Q5T200 1668 aaKnown RBP15.21■□□□□ 0.03
LINC00941-201ENST00000547804 PZPP20742 1482 aa15.2■□□□□ 0.02
LINC00941-201ENST00000547804 NPATQ14207 1427 aa15.2■□□□□ 0.02
LINC00941-201ENST00000547804 C3P01024 1663 aa15.19■□□□□ 0.02
LINC00941-201ENST00000547804 ARHGAP31Q2M1Z3 1444 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms