RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 DHX29Q7Z478 1369 aaKnown RBP21.38■■□□□ 1.01
BRF1-212ENST00000547562 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
BRF1-212ENST00000547562 KDM2AQ9Y2K7 1162 aa21.38■■□□□ 1.01
BRF1-212ENST00000547562 ABCC1P33527 1531 aa21.37■■□□□ 1.01
BRF1-212ENST00000547562 ERBINQ96RT1 1412 aa21.36■■□□□ 1.01
BRF1-212ENST00000547562 MAGI2Q86UL8 1455 aa21.36■■□□□ 1.01
BRF1-212ENST00000547562 EFCAB2Q5VUJ9 269 aa21.35■■□□□ 1.01
BRF1-212ENST00000547562 PLA2R1Q13018 1463 aa21.35■■□□□ 1.01
BRF1-212ENST00000547562 ROCK2O75116 1388 aaKnown RBP21.34■■□□□ 1.01
BRF1-212ENST00000547562 TRPM1Q7Z4N2 1603 aa21.34■■□□□ 1.01
BRF1-212ENST00000547562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.014e-6■■□□□ 14.4
BRF1-212ENST00000547562 FAM9BQ8IZU0 186 aa21.33■■□□□ 1
BRF1-212ENST00000547562 POLR3GLQ9BT43 218 aa21.32■■□□□ 1
BRF1-212ENST00000547562 PRAG1Q86YV5 1406 aa21.32■■□□□ 1
BRF1-212ENST00000547562 ARAP3Q8WWN8 1544 aa21.31■■□□□ 1
BRF1-212ENST00000547562 MYT1Q01538 1121 aa21.3■■□□□ 1
BRF1-212ENST00000547562 ST20-MTHFSA0A0A6YYL1 179 aa21.29■■□□□ 1
BRF1-212ENST00000547562 TRAPPC8Q9Y2L5 1435 aa21.29■■□□□ 1
BRF1-212ENST00000547562 ATP10AO60312 1499 aa21.29■■□□□ 1
BRF1-212ENST00000547562 A2MP01023 1474 aa21.28■■□□□ 1
BRF1-212ENST00000547562 TSHZ2Q9NRE2 1034 aa21.27■■□□□ 1
BRF1-212ENST00000547562 ZBED9Q6R2W3 1325 aa21.27■■□□□ 1
BRF1-212ENST00000547562 E9PCH4 1651 aa21.25■□□□□ 0.99
BRF1-212ENST00000547562 LAMC1P11047 1609 aa21.25■□□□□ 0.99
BRF1-212ENST00000547562 RGL3Q3MIN7 710 aa21.24■□□□□ 0.99
BRF1-212ENST00000547562 RTEL1-TNFRSF6BF6WH68 1400 aa21.23■□□□□ 0.99
BRF1-212ENST00000547562 ZFYVE16Q7Z3T8 1539 aa21.23■□□□□ 0.99
BRF1-212ENST00000547562 GPRASP1Q5JY77 1395 aa21.23■□□□□ 0.99
BRF1-212ENST00000547562 WDR7Q9Y4E6 1490 aa21.22■□□□□ 0.99
BRF1-212ENST00000547562 EIF2AK4Q9P2K8 1649 aaKnown RBP21.22■□□□□ 0.99
BRF1-212ENST00000547562 SPAG9O60271 1321 aaKnown RBP21.21■□□□□ 0.99
BRF1-212ENST00000547562 ABCA9Q8IUA7 1624 aa21.2■□□□□ 0.98
BRF1-212ENST00000547562 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
BRF1-212ENST00000547562 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
BRF1-212ENST00000547562 NBPF1Q3BBV0 1214 aa21.18■□□□□ 0.98
BRF1-212ENST00000547562 AFAP1Q8N556 730 aa21.17■□□□□ 0.98
BRF1-212ENST00000547562 DEPDC5O75140 1603 aa21.17■□□□□ 0.98
BRF1-212ENST00000547562 KTN1Q86UP2 1357 aaKnown RBP21.15■□□□□ 0.98
BRF1-212ENST00000547562 FANCAO15360 1455 aa21.15■□□□□ 0.98
BRF1-212ENST00000547562 INO80Q9ULG1 1556 aaPredicted RBP21.15■□□□□ 0.98
BRF1-212ENST00000547562 ATP7AQ04656 1500 aa21.13■□□□□ 0.97
BRF1-212ENST00000547562 RNF17Q9BXT8 1623 aaKnown RBP21.13■□□□□ 0.97
BRF1-212ENST00000547562 SPHKAPQ2M3C7 1700 aa21.13■□□□□ 0.97
BRF1-212ENST00000547562 TRPM2O94759 1503 aa21.12■□□□□ 0.97
BRF1-212ENST00000547562 COL17A1Q9UMD9 1497 aaPredicted RBP21.12■□□□□ 0.97
BRF1-212ENST00000547562 IRX6P78412 446 aaPredicted RBP21.12■□□□□ 0.97
BRF1-212ENST00000547562 ERICH6BQ5W0A0 696 aa21.12■□□□□ 0.97
BRF1-212ENST00000547562 CEP152O94986 1710 aa21.11■□□□□ 0.97
BRF1-212ENST00000547562 TET3O43151 1660 aa21.11■□□□□ 0.97
BRF1-212ENST00000547562 RALBP1Q15311 655 aa21.1■□□□□ 0.97
BRF1-212ENST00000547562 PNISRQ8TF01 805 aaKnown RBP21.1■□□□□ 0.97
BRF1-212ENST00000547562 TMC1Q8TDI8 760 aa21.1■□□□□ 0.97
BRF1-212ENST00000547562 MYBBP1AQ9BQG0 1328 aaKnown RBP21.09■□□□□ 0.97
BRF1-212ENST00000547562 BRD4O60885 1362 aaPredicted RBP21.09■□□□□ 0.97
BRF1-212ENST00000547562 TESK2Q96S53 571 aa21.08■□□□□ 0.97
BRF1-212ENST00000547562 ADGRL1O94910 1474 aa21.08■□□□□ 0.97
BRF1-212ENST00000547562 PTPRTO14522 1441 aa21.08■□□□□ 0.97
BRF1-212ENST00000547562 MADDQ8WXG6 1647 aa21.08■□□□□ 0.96
BRF1-212ENST00000547562 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
BRF1-212ENST00000547562 ASXL2Q76L83 1435 aa21.07■□□□□ 0.96
BRF1-212ENST00000547562 SMG6Q86US8 1419 aaKnown RBP21.06■□□□□ 0.96
BRF1-212ENST00000547562 CLTCL1P53675 1640 aa21.06■□□□□ 0.96
BRF1-212ENST00000547562 DISP3Q9P2K9 1392 aa21.06■□□□□ 0.96
BRF1-212ENST00000547562 SCAPERQ9BY12 1400 aa21.05■□□□□ 0.96
BRF1-212ENST00000547562 LRPPRCP42704 1394 aaKnown RBP21.05■□□□□ 0.96
BRF1-212ENST00000547562 KANK1Q14678 1352 aa21.04■□□□□ 0.96
BRF1-212ENST00000547562 PARD3Q8TEW0 1356 aa21.03■□□□□ 0.96
BRF1-212ENST00000547562 IQGAP1P46940 1657 aa21.02■□□□□ 0.96
BRF1-212ENST00000547562 PER1O15534 1290 aaPredicted RBP21.02■□□□□ 0.96
BRF1-212ENST00000547562 MROH1Q8NDA8 1641 aa21.01■□□□□ 0.95
BRF1-212ENST00000547562 TMF1P82094 1093 aa21■□□□□ 0.95
BRF1-212ENST00000547562 PPP4R2Q9NY27 417 aa21■□□□□ 0.95
BRF1-212ENST00000547562 STAC3Q96MF2 364 aa21■□□□□ 0.95
BRF1-212ENST00000547562 NUDCQ9Y266 331 aa20.99■□□□□ 0.95
BRF1-212ENST00000547562 KIDINS220Q9ULH0 1771 aa20.99■□□□□ 0.95
BRF1-212ENST00000547562 KIF3BO15066 747 aa20.99■□□□□ 0.95
BRF1-212ENST00000547562 WASHC2CQ9Y4E1 1318 aa20.99■□□□□ 0.95
BRF1-212ENST00000547562 NLRP13Q86W25 1043 aa20.98■□□□□ 0.95
BRF1-212ENST00000547562 MYT1LQ9UL68 1186 aa20.98■□□□□ 0.95
BRF1-212ENST00000547562 NEURL4Q96JN8 1562 aa20.97■□□□□ 0.95
BRF1-212ENST00000547562 ZNF518AQ6AHZ1 1483 aa20.94■□□□□ 0.94
BRF1-212ENST00000547562 PANK3Q9H999 370 aa20.94■□□□□ 0.94
BRF1-212ENST00000547562 KIAA1210Q9ULL0 1709 aa20.94■□□□□ 0.94
BRF1-212ENST00000547562 SCAF11Q99590 1463 aaKnown RBP20.93■□□□□ 0.94
BRF1-212ENST00000547562 EFCAB6Q5THR3 1501 aa20.93■□□□□ 0.94
BRF1-212ENST00000547562 OSCARQ8IYS5 282 aa20.92■□□□□ 0.94
BRF1-212ENST00000547562 RBM19Q9Y4C8 960 aaKnown RBP20.92■□□□□ 0.94
BRF1-212ENST00000547562 KIF1BO60333 1816 aa20.92■□□□□ 0.94
BRF1-212ENST00000547562 CFAP74Q9C0B2 1584 aa20.92■□□□□ 0.94
BRF1-212ENST00000547562 RNF123Q5XPI4 1314 aa20.91■□□□□ 0.94
BRF1-212ENST00000547562 NPM1P06748 294 aaKnown RBP eCLIP20.91■□□□□ 0.94
BRF1-212ENST00000547562 PPRC1Q5VV67 1664 aaKnown RBP20.9■□□□□ 0.94
BRF1-212ENST00000547562 SENP3-EIF4A1A0A087X0R7 540 aa20.89■□□□□ 0.93
BRF1-212ENST00000547562 CC2D1BQ5T0F9 858 aaKnown RBP20.89■□□□□ 0.93
BRF1-212ENST00000547562 UGGT1Q9NYU2 1555 aa20.89■□□□□ 0.93
BRF1-212ENST00000547562 LMTK2Q8IWU2 1503 aa20.88■□□□□ 0.93
BRF1-212ENST00000547562 MAP3K4Q9Y6R4 1608 aa20.87■□□□□ 0.93
BRF1-212ENST00000547562 IFT172Q9UG01 1749 aa20.87■□□□□ 0.93
BRF1-212ENST00000547562 MYOM2P54296 1465 aa20.87■□□□□ 0.93
BRF1-212ENST00000547562 CD109Q6YHK3 1445 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms